RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 RAPGEF2Q9Y4G8 1499 aa26.68■■□□□ 1.86
TSKU-204ENST00000533752 JPH4Q96JJ6 628 aa26.65■■□□□ 1.86
TSKU-204ENST00000533752 PRG4Q92954 1404 aaPredicted RBP26.64■■□□□ 1.85
TSKU-204ENST00000533752 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
TSKU-204ENST00000533752 EEA1Q15075 1411 aa26.61■■□□□ 1.85
TSKU-204ENST00000533752 PRXQ9BXM0 1461 aa26.57■■□□□ 1.84
TSKU-204ENST00000533752 IQGAP2Q13576 1575 aa26.56■■□□□ 1.84
TSKU-204ENST00000533752 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
TSKU-204ENST00000533752 CSRNP3Q8WYN3 585 aa26.49■■□□□ 1.83
TSKU-204ENST00000533752 CARMIL2Q6F5E8 1435 aa26.46■■□□□ 1.83
TSKU-204ENST00000533752 CTTNBP2Q8WZ74 1663 aa26.43■■□□□ 1.82
TSKU-204ENST00000533752 UGGT2Q9NYU1 1516 aa26.41■■□□□ 1.82
TSKU-204ENST00000533752 TNIKQ9UKE5 1360 aa26.35■■□□□ 1.81
TSKU-204ENST00000533752 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
TSKU-204ENST00000533752 PTPRGP23470 1445 aa26.31■■□□□ 1.8
TSKU-204ENST00000533752 FAM9AQ8IZU1 332 aaPredicted RBP26.31■■□□□ 1.8
TSKU-204ENST00000533752 KIF21BO75037 1637 aa26.3■■□□□ 1.8
TSKU-204ENST00000533752 GOLGA3Q08378 1498 aa26.3■■□□□ 1.8
TSKU-204ENST00000533752 KIAA0556O60303 1618 aa26.29■■□□□ 1.8
TSKU-204ENST00000533752 TRHP20396 242 aaPredicted RBP26.24■■□□□ 1.79
TSKU-204ENST00000533752 ADCY10Q96PN6 1610 aa26.24■■□□□ 1.79
TSKU-204ENST00000533752 NPM1P06748 294 aaKnown RBP eCLIP26.2■■□□□ 1.78
TSKU-204ENST00000533752 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
TSKU-204ENST00000533752 UHRF1BP1LA0JNW5 1464 aa26.16■■□□□ 1.78
TSKU-204ENST00000533752 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
TSKU-204ENST00000533752 MAPKBP1O60336 1514 aa26.14■■□□□ 1.78
TSKU-204ENST00000533752 ABCC2Q92887 1545 aa26.13■■□□□ 1.77
TSKU-204ENST00000533752 SAMD9Q5K651 1589 aa26.1■■□□□ 1.77
TSKU-204ENST00000533752 EFCAB5A4FU69 1503 aa26.02■■□□□ 1.76
TSKU-204ENST00000533752 UBTFP17480 764 aaKnown RBP26.01■■□□□ 1.75
TSKU-204ENST00000533752 KDM5BQ9UGL1 1544 aa26.01■■□□□ 1.75
TSKU-204ENST00000533752 ABCA8O94911 1581 aa26■■□□□ 1.75
TSKU-204ENST00000533752 ABCC10Q5T3U5 1492 aa26■■□□□ 1.75
TSKU-204ENST00000533752 PLB1Q6P1J6 1458 aa26■■□□□ 1.75
TSKU-204ENST00000533752 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
TSKU-204ENST00000533752 DIP2BQ9P265 1576 aa25.95■■□□□ 1.75
TSKU-204ENST00000533752 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.74
TSKU-204ENST00000533752 ZCCHC11Q5TAX3 1644 aaKnown RBP25.93■■□□□ 1.74
TSKU-204ENST00000533752 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
TSKU-204ENST00000533752 ASXL2Q76L83 1435 aa25.93■■□□□ 1.74
TSKU-204ENST00000533752 RANGAP1P46060 587 aaPredicted RBP25.92■■□□□ 1.74
TSKU-204ENST00000533752 FHOD3Q2V2M9 1422 aa25.9■■□□□ 1.74
TSKU-204ENST00000533752 FAM69CQ0P6D2 419 aa25.9■■□□□ 1.74
TSKU-204ENST00000533752 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
TSKU-204ENST00000533752 WDR7Q9Y4E6 1490 aa25.83■■□□□ 1.73
TSKU-204ENST00000533752 GLI2P10070 1586 aa25.82■■□□□ 1.72
TSKU-204ENST00000533752 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
TSKU-204ENST00000533752 EPRSP07814 1512 aaKnown RBP25.79■■□□□ 1.72
TSKU-204ENST00000533752 FMN1Q68DA7 1419 aa25.77■■□□□ 1.72
TSKU-204ENST00000533752 ATP10BO94823 1461 aa25.76■■□□□ 1.71
TSKU-204ENST00000533752 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
TSKU-204ENST00000533752 ARID3CA6NKF2 412 aa25.69■■□□□ 1.7
TSKU-204ENST00000533752 MAP3K4Q9Y6R4 1608 aa25.67■■□□□ 1.7
TSKU-204ENST00000533752 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
TSKU-204ENST00000533752 HECW1Q76N89 1606 aa25.65■■□□□ 1.7
TSKU-204ENST00000533752 CLIP1P30622 1438 aa25.64■■□□□ 1.7
TSKU-204ENST00000533752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.7
TSKU-204ENST00000533752 HNRNPUL2Q1KMD3 747 aaKnown RBP25.64■■□□□ 1.7
TSKU-204ENST00000533752 TEX14Q8IWB6 1497 aa25.63■■□□□ 1.69
TSKU-204ENST00000533752 CFAP43Q8NDM7 1665 aa25.61■■□□□ 1.69
TSKU-204ENST00000533752 KCNH8Q96L42 1107 aa25.6■■□□□ 1.69
TSKU-204ENST00000533752 PPRC1Q5VV67 1664 aaKnown RBP25.6■■□□□ 1.69
TSKU-204ENST00000533752 KDM6BO15054 1643 aa25.56■■□□□ 1.68
TSKU-204ENST00000533752 CD109Q6YHK3 1445 aa25.56■■□□□ 1.68
TSKU-204ENST00000533752 MAGI3Q5TCQ9 1506 aa25.55■■□□□ 1.68
TSKU-204ENST00000533752 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
TSKU-204ENST00000533752 CDK13Q14004 1512 aaKnown RBP25.54■■□□□ 1.68
TSKU-204ENST00000533752 ABCA9Q8IUA7 1624 aa25.53■■□□□ 1.68
TSKU-204ENST00000533752 CASKIN1Q8WXD9 1431 aa25.53■■□□□ 1.68
TSKU-204ENST00000533752 ATP1B4Q9UN42 357 aaPredicted RBP25.52■■□□□ 1.68
TSKU-204ENST00000533752 CEP162Q5TB80 1403 aa25.51■■□□□ 1.67
TSKU-204ENST00000533752 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
TSKU-204ENST00000533752 FYCO1Q9BQS8 1478 aa25.49■■□□□ 1.67
TSKU-204ENST00000533752 CDK11AQ9UQ88 783 aaPredicted RBP25.48■■□□□ 1.67
TSKU-204ENST00000533752 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
TSKU-204ENST00000533752 PHLDB1Q86UU1 1377 aa25.4■■□□□ 1.66
TSKU-204ENST00000533752 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.66
TSKU-204ENST00000533752 LRRIQ1Q96JM4 1722 aa25.39■■□□□ 1.65
TSKU-204ENST00000533752 TROQ12816 1431 aaPredicted RBP25.38■■□□□ 1.65
TSKU-204ENST00000533752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.38■■□□□ 1.65
TSKU-204ENST00000533752 NEO1Q92859 1461 aa25.36■■□□□ 1.65
TSKU-204ENST00000533752 KIF14Q15058 1648 aa25.35■■□□□ 1.65
TSKU-204ENST00000533752 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
TSKU-204ENST00000533752 COL17A1Q9UMD9 1497 aaPredicted RBP25.34■■□□□ 1.65
TSKU-204ENST00000533752 ARAP3Q8WWN8 1544 aa25.32■■□□□ 1.64
TSKU-204ENST00000533752 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
TSKU-204ENST00000533752 FANCAO15360 1455 aa25.28■■□□□ 1.64
TSKU-204ENST00000533752 PLCH2O75038 1416 aa25.25■■□□□ 1.63
TSKU-204ENST00000533752 MYO5CQ9NQX4 1742 aa25.23■■□□□ 1.63
TSKU-204ENST00000533752 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
TSKU-204ENST00000533752 AKNAQ7Z591 1439 aa25.2■■□□□ 1.63
TSKU-204ENST00000533752 MTUS2Q5JR59 1369 aa25.17■■□□□ 1.62
TSKU-204ENST00000533752 DENND4BO75064 1496 aaPredicted RBP25.16■■□□□ 1.62
TSKU-204ENST00000533752 EFCAB2Q5VUJ9 269 aa25.15■■□□□ 1.62
TSKU-204ENST00000533752 ARHGAP5Q13017 1502 aa25.15■■□□□ 1.62
TSKU-204ENST00000533752 EHBP1L1Q8N3D4 1523 aa25.15■■□□□ 1.62
TSKU-204ENST00000533752 ADGRL1O94910 1474 aa25.14■■□□□ 1.61
TSKU-204ENST00000533752 PREX2Q70Z35 1606 aa25.13■■□□□ 1.61
TSKU-204ENST00000533752 FRMPD1Q5SYB0 1578 aa25.12■■□□□ 1.61
TSKU-204ENST00000533752 RAPGEF3O95398 923 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms