RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
NXF1-217ENST00000533671 JPH4Q96JJ6 628 aa29.27■■■□□ 2.28
NXF1-217ENST00000533671 KIAA0586Q9BVV6 1533 aa29.25■■■□□ 2.27
NXF1-217ENST00000533671 ERCC6L2Q5T890 1561 aa29.22■■■□□ 2.27
NXF1-217ENST00000533671 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.27
NXF1-217ENST00000533671 EEA1Q15075 1411 aa29.2■■■□□ 2.26
NXF1-217ENST00000533671 CSRNP3Q8WYN3 585 aa29.17■■■□□ 2.26
NXF1-217ENST00000533671 FAM9AQ8IZU1 332 aaPredicted RBP29.16■■■□□ 2.26
NXF1-217ENST00000533671 IQGAP2Q13576 1575 aa29.13■■■□□ 2.25
NXF1-217ENST00000533671 PRXQ9BXM0 1461 aa29.12■■■□□ 2.25
NXF1-217ENST00000533671 CTTNBP2Q8WZ74 1663 aa29.08■■■□□ 2.25
NXF1-217ENST00000533671 CARMIL2Q6F5E8 1435 aa29.01■■■□□ 2.23
NXF1-217ENST00000533671 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
NXF1-217ENST00000533671 UGGT2Q9NYU1 1516 aa28.92■■■□□ 2.22
NXF1-217ENST00000533671 KIF21BO75037 1637 aa28.88■■■□□ 2.21
NXF1-217ENST00000533671 TNIKQ9UKE5 1360 aa28.88■■■□□ 2.21
NXF1-217ENST00000533671 PTPRGP23470 1445 aa28.87■■■□□ 2.21
NXF1-217ENST00000533671 DISP1Q96F81 1524 aa28.86■■■□□ 2.21
NXF1-217ENST00000533671 TRHP20396 242 aaPredicted RBP28.85■■■□□ 2.21
NXF1-217ENST00000533671 KIAA0556O60303 1618 aa28.83■■■□□ 2.21
NXF1-217ENST00000533671 EHMT2Q96KQ7 1210 aa28.82■■■□□ 2.2
NXF1-217ENST00000533671 GOLGA3Q08378 1498 aa28.82■■■□□ 2.2
NXF1-217ENST00000533671 NPM1P06748 294 aaKnown RBP eCLIP28.8■■■□□ 2.2
NXF1-217ENST00000533671 ADCY10Q96PN6 1610 aa28.76■■■□□ 2.19
NXF1-217ENST00000533671 UBTFP17480 764 aaKnown RBP28.74■■■□□ 2.19
NXF1-217ENST00000533671 RANGAP1P46060 587 aaPredicted RBP28.73■■■□□ 2.19
NXF1-217ENST00000533671 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
NXF1-217ENST00000533671 UACAQ9BZF9 1416 aa28.66■■■□□ 2.18
NXF1-217ENST00000533671 SAMD9Q5K651 1589 aa28.61■■■□□ 2.17
NXF1-217ENST00000533671 ABCC2Q92887 1545 aa28.6■■■□□ 2.17
NXF1-217ENST00000533671 UHRF1BP1LA0JNW5 1464 aa28.59■■■□□ 2.17
NXF1-217ENST00000533671 MAPKBP1O60336 1514 aa28.55■■■□□ 2.16
NXF1-217ENST00000533671 PLB1Q6P1J6 1458 aa28.53■■■□□ 2.16
NXF1-217ENST00000533671 EFCAB5A4FU69 1503 aa28.51■■■□□ 2.15
NXF1-217ENST00000533671 ABCA8O94911 1581 aa28.49■■■□□ 2.15
NXF1-217ENST00000533671 FHOD3Q2V2M9 1422 aa28.48■■■□□ 2.15
NXF1-217ENST00000533671 KIF13AQ9H1H9 1805 aa28.48■■■□□ 2.15
NXF1-217ENST00000533671 ZCCHC11Q5TAX3 1644 aaKnown RBP28.47■■■□□ 2.15
NXF1-217ENST00000533671 KDM5BQ9UGL1 1544 aa28.46■■■□□ 2.15
NXF1-217ENST00000533671 FAM69CQ0P6D2 419 aa28.44■■■□□ 2.14
NXF1-217ENST00000533671 ABCC10Q5T3U5 1492 aa28.43■■■□□ 2.14
NXF1-217ENST00000533671 ASXL2Q76L83 1435 aa28.42■■■□□ 2.14
NXF1-217ENST00000533671 RAPGEF6Q8TEU7 1601 aa28.4■■■□□ 2.14
NXF1-217ENST00000533671 DIP2BQ9P265 1576 aa28.4■■■□□ 2.14
NXF1-217ENST00000533671 ARID3CA6NKF2 412 aa28.37■■■□□ 2.13
NXF1-217ENST00000533671 ARHGAP35Q9NRY4 1499 aa28.34■■■□□ 2.13
NXF1-217ENST00000533671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.31■■■□□ 2.12
NXF1-217ENST00000533671 HNRNPUL2Q1KMD3 747 aaKnown RBP28.31■■■□□ 2.12
NXF1-217ENST00000533671 TSPOAP1O95153 1857 aa28.3■■■□□ 2.12
NXF1-217ENST00000533671 FMN1Q68DA7 1419 aa28.27■■■□□ 2.12
NXF1-217ENST00000533671 ATP10BO94823 1461 aa28.27■■■□□ 2.12
NXF1-217ENST00000533671 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
NXF1-217ENST00000533671 ATP1B4Q9UN42 357 aaPredicted RBP28.24■■■□□ 2.11
NXF1-217ENST00000533671 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
NXF1-217ENST00000533671 KCNH8Q96L42 1107 aa28.23■■■□□ 2.11
NXF1-217ENST00000533671 GLI2P10070 1586 aa28.23■■■□□ 2.11
NXF1-217ENST00000533671 NUP153P49790 1475 aaKnown RBP28.22■■■□□ 2.11
NXF1-217ENST00000533671 CLIP1P30622 1438 aa28.21■■■□□ 2.11
NXF1-217ENST00000533671 HECW1Q76N89 1606 aa28.15■■■□□ 2.1
NXF1-217ENST00000533671 LOC105371045A0A1W2PR82 267 aa28.15■■■□□ 2.1
NXF1-217ENST00000533671 MAP3K4Q9Y6R4 1608 aa28.12■■■□□ 2.09
NXF1-217ENST00000533671 PLEKHD1A6NEE1 506 aa28.11■■■□□ 2.09
NXF1-217ENST00000533671 CFAP43Q8NDM7 1665 aa28.08■■■□□ 2.09
NXF1-217ENST00000533671 CDK13Q14004 1512 aaKnown RBP28.08■■■□□ 2.08
NXF1-217ENST00000533671 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
NXF1-217ENST00000533671 PPRC1Q5VV67 1664 aaKnown RBP28.06■■■□□ 2.08
NXF1-217ENST00000533671 CD109Q6YHK3 1445 aa28.04■■■□□ 2.08
NXF1-217ENST00000533671 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
NXF1-217ENST00000533671 TEX14Q8IWB6 1497 aa28.03■■■□□ 2.08
NXF1-217ENST00000533671 KDM6BO15054 1643 aa28.01■■■□□ 2.07
NXF1-217ENST00000533671 CDK11AQ9UQ88 783 aaPredicted RBP28.01■■■□□ 2.07
NXF1-217ENST00000533671 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
NXF1-217ENST00000533671 LRRIQ1Q96JM4 1722 aa27.98■■■□□ 2.07
NXF1-217ENST00000533671 ABCA9Q8IUA7 1624 aa27.97■■■□□ 2.07
NXF1-217ENST00000533671 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.07
NXF1-217ENST00000533671 CCDC18Q5T9S5 1454 aa27.94■■■□□ 2.06
NXF1-217ENST00000533671 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
NXF1-217ENST00000533671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.85■■■□□ 2.05
NXF1-217ENST00000533671 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
NXF1-217ENST00000533671 KIF14Q15058 1648 aa27.83■■■□□ 2.05
NXF1-217ENST00000533671 TTC37Q6PGP7 1564 aa27.82■■■□□ 2.04
NXF1-217ENST00000533671 COL17A1Q9UMD9 1497 aaPredicted RBP27.76■■■□□ 2.03
NXF1-217ENST00000533671 MYO5CQ9NQX4 1742 aa27.75■■■□□ 2.03
NXF1-217ENST00000533671 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
NXF1-217ENST00000533671 CFAP74Q9C0B2 1584 aa27.74■■■□□ 2.03
NXF1-217ENST00000533671 NEO1Q92859 1461 aa27.74■■■□□ 2.03
NXF1-217ENST00000533671 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
NXF1-217ENST00000533671 FANCAO15360 1455 aa27.7■■■□□ 2.03
NXF1-217ENST00000533671 ARAP3Q8WWN8 1544 aa27.69■■■□□ 2.02
NXF1-217ENST00000533671 MTUS2Q5JR59 1369 aa27.69■■■□□ 2.02
NXF1-217ENST00000533671 PLCH2O75038 1416 aa27.68■■■□□ 2.02
NXF1-217ENST00000533671 AKNAQ7Z591 1439 aa27.66■■■□□ 2.02
NXF1-217ENST00000533671 EFCAB2Q5VUJ9 269 aa27.64■■■□□ 2.02
NXF1-217ENST00000533671 ARHGAP5Q13017 1502 aa27.62■■■□□ 2.01
NXF1-217ENST00000533671 RAPGEF3O95398 923 aa27.6■■■□□ 2.01
NXF1-217ENST00000533671 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
NXF1-217ENST00000533671 CDC42BPBQ9Y5S2 1711 aa27.58■■■□□ 2.01
NXF1-217ENST00000533671 TIAM1Q13009 1591 aa27.58■■■□□ 2.01
NXF1-217ENST00000533671 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
NXF1-217ENST00000533671 PREX2Q70Z35 1606 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms