RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
TGFBR3-211ENST00000533370 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
TGFBR3-211ENST00000533370 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
TGFBR3-211ENST00000533370 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
TGFBR3-211ENST00000533370 ADAMTS12P58397 1594 aa19.48■□□□□ 0.71
TGFBR3-211ENST00000533370 CLIP1P30622 1438 aa19.46■□□□□ 0.71
TGFBR3-211ENST00000533370 SYNJ2O15056 1496 aa19.44■□□□□ 0.7
TGFBR3-211ENST00000533370 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
TGFBR3-211ENST00000533370 FBLN2P98095 1184 aa19.4■□□□□ 0.7
TGFBR3-211ENST00000533370 GRIN2AQ12879 1464 aa19.4■□□□□ 0.7
TGFBR3-211ENST00000533370 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
TGFBR3-211ENST00000533370 KIAA0586Q9BVV6 1533 aa19.32■□□□□ 0.68
TGFBR3-211ENST00000533370 CTTNBP2Q8WZ74 1663 aa19.3■□□□□ 0.68
TGFBR3-211ENST00000533370 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
TGFBR3-211ENST00000533370 NUP160Q12769 1436 aa19.29■□□□□ 0.68
TGFBR3-211ENST00000533370 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
TGFBR3-211ENST00000533370 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
TGFBR3-211ENST00000533370 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
TGFBR3-211ENST00000533370 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
TGFBR3-211ENST00000533370 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
TGFBR3-211ENST00000533370 CEP170Q5SW79 1584 aa19.22■□□□□ 0.67
TGFBR3-211ENST00000533370 JPH4Q96JJ6 628 aa19.21■□□□□ 0.67
TGFBR3-211ENST00000533370 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
TGFBR3-211ENST00000533370 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
TGFBR3-211ENST00000533370 APLP2Q06481 763 aa19.16■□□□□ 0.66
TGFBR3-211ENST00000533370 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
TGFBR3-211ENST00000533370 CHD1O14646 1710 aa19.14■□□□□ 0.66
TGFBR3-211ENST00000533370 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
TGFBR3-211ENST00000533370 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
TGFBR3-211ENST00000533370 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
TGFBR3-211ENST00000533370 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
TGFBR3-211ENST00000533370 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
TGFBR3-211ENST00000533370 CASKIN1Q8WXD9 1431 aa19.05■□□□□ 0.64
TGFBR3-211ENST00000533370 PRG4Q92954 1404 aaPredicted RBP19.04■□□□□ 0.64
TGFBR3-211ENST00000533370 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
TGFBR3-211ENST00000533370 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
TGFBR3-211ENST00000533370 CLASP1Q7Z460 1538 aa19.02■□□□□ 0.64
TGFBR3-211ENST00000533370 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
TGFBR3-211ENST00000533370 FYCO1Q9BQS8 1478 aa19.01■□□□□ 0.63
TGFBR3-211ENST00000533370 MAP3K1Q13233 1512 aa19■□□□□ 0.63
TGFBR3-211ENST00000533370 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
TGFBR3-211ENST00000533370 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
TGFBR3-211ENST00000533370 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
TGFBR3-211ENST00000533370 PTPRGP23470 1445 aa18.94■□□□□ 0.62
TGFBR3-211ENST00000533370 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
TGFBR3-211ENST00000533370 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
TGFBR3-211ENST00000533370 MSH5O43196 834 aa18.92■□□□□ 0.62
TGFBR3-211ENST00000533370 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
TGFBR3-211ENST00000533370 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
TGFBR3-211ENST00000533370 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
TGFBR3-211ENST00000533370 HECW1Q76N89 1606 aa18.85■□□□□ 0.61
TGFBR3-211ENST00000533370 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
TGFBR3-211ENST00000533370 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
TGFBR3-211ENST00000533370 PLB1Q6P1J6 1458 aa18.84■□□□□ 0.61
TGFBR3-211ENST00000533370 RAPGEF6Q8TEU7 1601 aa18.83■□□□□ 0.61
TGFBR3-211ENST00000533370 ERCC6L2Q5T890 1561 aa18.83■□□□□ 0.6
TGFBR3-211ENST00000533370 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
TGFBR3-211ENST00000533370 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
TGFBR3-211ENST00000533370 NUP153P49790 1475 aaKnown RBP18.82■□□□□ 0.6
TGFBR3-211ENST00000533370 ABCA8O94911 1581 aa18.81■□□□□ 0.6
TGFBR3-211ENST00000533370 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
TGFBR3-211ENST00000533370 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
TGFBR3-211ENST00000533370 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
TGFBR3-211ENST00000533370 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
TGFBR3-211ENST00000533370 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
TGFBR3-211ENST00000533370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
TGFBR3-211ENST00000533370 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
TGFBR3-211ENST00000533370 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
TGFBR3-211ENST00000533370 CDK13Q14004 1512 aaKnown RBP18.74■□□□□ 0.59
TGFBR3-211ENST00000533370 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
TGFBR3-211ENST00000533370 ATP10BO94823 1461 aa18.73■□□□□ 0.59
TGFBR3-211ENST00000533370 PLEKHD1A6NEE1 506 aa18.73■□□□□ 0.59
TGFBR3-211ENST00000533370 LRRIQ1Q96JM4 1722 aa18.73■□□□□ 0.59
TGFBR3-211ENST00000533370 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
TGFBR3-211ENST00000533370 EHBP1L1Q8N3D4 1523 aa18.69■□□□□ 0.58
TGFBR3-211ENST00000533370 ABCC2Q92887 1545 aa18.69■□□□□ 0.58
TGFBR3-211ENST00000533370 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
TGFBR3-211ENST00000533370 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
TGFBR3-211ENST00000533370 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
TGFBR3-211ENST00000533370 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
TGFBR3-211ENST00000533370 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
TGFBR3-211ENST00000533370 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
TGFBR3-211ENST00000533370 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
TGFBR3-211ENST00000533370 ARHGEF11O15085 1522 aa18.62■□□□□ 0.57
TGFBR3-211ENST00000533370 KDM5BQ9UGL1 1544 aa18.62■□□□□ 0.57
TGFBR3-211ENST00000533370 SUPT6HQ7KZ85 1726 aaKnown RBP18.62■□□□□ 0.57
TGFBR3-211ENST00000533370 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
TGFBR3-211ENST00000533370 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
TGFBR3-211ENST00000533370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
TGFBR3-211ENST00000533370 ADCY10Q96PN6 1610 aa18.56■□□□□ 0.56
TGFBR3-211ENST00000533370 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
TGFBR3-211ENST00000533370 FAM50AQ14320 339 aaKnown RBP18.54■□□□□ 0.56
TGFBR3-211ENST00000533370 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
TGFBR3-211ENST00000533370 MIA2Q96PC5 1412 aa18.53■□□□□ 0.56
TGFBR3-211ENST00000533370 ZCCHC11Q5TAX3 1644 aaKnown RBP18.52■□□□□ 0.55
TGFBR3-211ENST00000533370 KCNH8Q96L42 1107 aa18.51■□□□□ 0.55
TGFBR3-211ENST00000533370 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
TGFBR3-211ENST00000533370 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
TGFBR3-211ENST00000533370 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
TGFBR3-211ENST00000533370 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms