RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
TGFBR3-211ENST00000533370 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
TGFBR3-211ENST00000533370 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
TGFBR3-211ENST00000533370 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
TGFBR3-211ENST00000533370 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
TGFBR3-211ENST00000533370 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
TGFBR3-211ENST00000533370 ABCC9O60706 1549 aa23.41■■□□□ 1.34
TGFBR3-211ENST00000533370 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
TGFBR3-211ENST00000533370 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
TGFBR3-211ENST00000533370 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
TGFBR3-211ENST00000533370 NACADO15069 1562 aa22.99■■□□□ 1.27
TGFBR3-211ENST00000533370 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
TGFBR3-211ENST00000533370 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
TGFBR3-211ENST00000533370 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
TGFBR3-211ENST00000533370 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
TGFBR3-211ENST00000533370 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
TGFBR3-211ENST00000533370 PABPN1Q86U42 306 aaKnown RBP eCLIP22.1■■□□□ 1.13
TGFBR3-211ENST00000533370 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
TGFBR3-211ENST00000533370 PLPPR3Q6T4P5 718 aa21.92■■□□□ 1.1
TGFBR3-211ENST00000533370 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
TGFBR3-211ENST00000533370 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.08
TGFBR3-211ENST00000533370 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
TGFBR3-211ENST00000533370 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
TGFBR3-211ENST00000533370 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
TGFBR3-211ENST00000533370 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
TGFBR3-211ENST00000533370 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
TGFBR3-211ENST00000533370 WIZO95785 1651 aa21.43■■□□□ 1.02
TGFBR3-211ENST00000533370 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
TGFBR3-211ENST00000533370 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
TGFBR3-211ENST00000533370 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
TGFBR3-211ENST00000533370 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
TGFBR3-211ENST00000533370 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
TGFBR3-211ENST00000533370 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
TGFBR3-211ENST00000533370 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
TGFBR3-211ENST00000533370 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
TGFBR3-211ENST00000533370 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
TGFBR3-211ENST00000533370 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
TGFBR3-211ENST00000533370 FOXD1Q16676 465 aa20.77■□□□□ 0.92
TGFBR3-211ENST00000533370 CADPSQ9ULU8 1353 aa20.71■□□□□ 0.91
TGFBR3-211ENST00000533370 CFTRP13569 1480 aa20.69■□□□□ 0.9
TGFBR3-211ENST00000533370 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
TGFBR3-211ENST00000533370 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
TGFBR3-211ENST00000533370 ADRA2BP18089 450 aa20.5■□□□□ 0.87
TGFBR3-211ENST00000533370 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
TGFBR3-211ENST00000533370 NESP48681 1621 aa20.47■□□□□ 0.87
TGFBR3-211ENST00000533370 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
TGFBR3-211ENST00000533370 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
TGFBR3-211ENST00000533370 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
TGFBR3-211ENST00000533370 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
TGFBR3-211ENST00000533370 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
TGFBR3-211ENST00000533370 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
TGFBR3-211ENST00000533370 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
TGFBR3-211ENST00000533370 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
TGFBR3-211ENST00000533370 CUX1P39880 1505 aa20.27■□□□□ 0.84
TGFBR3-211ENST00000533370 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
TGFBR3-211ENST00000533370 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
TGFBR3-211ENST00000533370 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
TGFBR3-211ENST00000533370 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
TGFBR3-211ENST00000533370 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
TGFBR3-211ENST00000533370 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
TGFBR3-211ENST00000533370 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
TGFBR3-211ENST00000533370 EEA1Q15075 1411 aa20.12■□□□□ 0.81
TGFBR3-211ENST00000533370 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
TGFBR3-211ENST00000533370 SOGA1O94964 1423 aa20.11■□□□□ 0.81
TGFBR3-211ENST00000533370 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
TGFBR3-211ENST00000533370 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
TGFBR3-211ENST00000533370 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
TGFBR3-211ENST00000533370 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
TGFBR3-211ENST00000533370 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
TGFBR3-211ENST00000533370 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
TGFBR3-211ENST00000533370 WDR62O43379 1518 aa19.98■□□□□ 0.79
TGFBR3-211ENST00000533370 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
TGFBR3-211ENST00000533370 CUX2O14529 1486 aa19.94■□□□□ 0.78
TGFBR3-211ENST00000533370 ABCA10Q8WWZ4 1543 aa19.94■□□□□ 0.78
TGFBR3-211ENST00000533370 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
TGFBR3-211ENST00000533370 IGF1RP08069 1367 aa19.87■□□□□ 0.77
TGFBR3-211ENST00000533370 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
TGFBR3-211ENST00000533370 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
TGFBR3-211ENST00000533370 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
TGFBR3-211ENST00000533370 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
TGFBR3-211ENST00000533370 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
TGFBR3-211ENST00000533370 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
TGFBR3-211ENST00000533370 WDR97A6NE52 1622 aa19.77■□□□□ 0.76
TGFBR3-211ENST00000533370 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
TGFBR3-211ENST00000533370 KIF21BO75037 1637 aa19.76■□□□□ 0.75
TGFBR3-211ENST00000533370 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
TGFBR3-211ENST00000533370 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
TGFBR3-211ENST00000533370 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
TGFBR3-211ENST00000533370 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.753e-12■■■■■ 47.9
TGFBR3-211ENST00000533370 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
TGFBR3-211ENST00000533370 TNIKQ9UKE5 1360 aa19.72■□□□□ 0.75
TGFBR3-211ENST00000533370 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
TGFBR3-211ENST00000533370 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
TGFBR3-211ENST00000533370 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
TGFBR3-211ENST00000533370 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
TGFBR3-211ENST00000533370 KCNA4P22459 653 aa19.67■□□□□ 0.74
TGFBR3-211ENST00000533370 CUL7Q14999 1698 aa19.62■□□□□ 0.73
TGFBR3-211ENST00000533370 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
TGFBR3-211ENST00000533370 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
TGFBR3-211ENST00000533370 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms