RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
PMS2P3-208ENST00000533167 FBLN2P98095 1184 aa13.78□□□□□ -0.2
PMS2P3-208ENST00000533167 CHD1O14646 1710 aa13.77□□□□□ -0.21
PMS2P3-208ENST00000533167 ARHGAP35Q9NRY4 1499 aa13.76□□□□□ -0.21
PMS2P3-208ENST00000533167 CLIP1P30622 1438 aa13.76□□□□□ -0.21
PMS2P3-208ENST00000533167 CLASP1Q7Z460 1538 aa13.75□□□□□ -0.21
PMS2P3-208ENST00000533167 UGGT2Q9NYU1 1516 aa13.75□□□□□ -0.21
PMS2P3-208ENST00000533167 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
PMS2P3-208ENST00000533167 CTTNBP2Q8WZ74 1663 aa13.73□□□□□ -0.21
PMS2P3-208ENST00000533167 ARAP1Q96P48 1450 aa13.72□□□□□ -0.21
PMS2P3-208ENST00000533167 DISP1Q96F81 1524 aa13.71□□□□□ -0.21
PMS2P3-208ENST00000533167 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
PMS2P3-208ENST00000533167 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
PMS2P3-208ENST00000533167 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
PMS2P3-208ENST00000533167 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
PMS2P3-208ENST00000533167 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
PMS2P3-208ENST00000533167 FHOD3Q2V2M9 1422 aa13.65□□□□□ -0.22
PMS2P3-208ENST00000533167 RANGAP1P46060 587 aaPredicted RBP13.64□□□□□ -0.23
PMS2P3-208ENST00000533167 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
PMS2P3-208ENST00000533167 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
PMS2P3-208ENST00000533167 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
PMS2P3-208ENST00000533167 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
PMS2P3-208ENST00000533167 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
PMS2P3-208ENST00000533167 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
PMS2P3-208ENST00000533167 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.24
PMS2P3-208ENST00000533167 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
PMS2P3-208ENST00000533167 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
PMS2P3-208ENST00000533167 PTPRGP23470 1445 aa13.52□□□□□ -0.25
PMS2P3-208ENST00000533167 PCF11O94913 1555 aaKnown RBP13.51□□□□□ -0.25
PMS2P3-208ENST00000533167 ABCA8O94911 1581 aa13.5□□□□□ -0.25
PMS2P3-208ENST00000533167 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
PMS2P3-208ENST00000533167 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
PMS2P3-208ENST00000533167 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
PMS2P3-208ENST00000533167 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
PMS2P3-208ENST00000533167 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
PMS2P3-208ENST00000533167 UHRF1BP1LA0JNW5 1464 aa13.45□□□□□ -0.26
PMS2P3-208ENST00000533167 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
PMS2P3-208ENST00000533167 RAPGEF6Q8TEU7 1601 aa13.43□□□□□ -0.26
PMS2P3-208ENST00000533167 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
PMS2P3-208ENST00000533167 KANK4Q5T7N3 995 aaPredicted RBP13.42□□□□□ -0.26
PMS2P3-208ENST00000533167 ABCC2Q92887 1545 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 HECW1Q76N89 1606 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 ATP10BO94823 1461 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
PMS2P3-208ENST00000533167 TTBK1Q5TCY1 1321 aaPredicted RBP13.4□□□□□ -0.26
PMS2P3-208ENST00000533167 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 CDK13Q14004 1512 aaKnown RBP13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 KDM5BQ9UGL1 1544 aa13.39□□□□□ -0.27
PMS2P3-208ENST00000533167 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
PMS2P3-208ENST00000533167 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
PMS2P3-208ENST00000533167 LRRC9Q6ZRR7 1453 aa13.37□□□□□ -0.27
PMS2P3-208ENST00000533167 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
PMS2P3-208ENST00000533167 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
PMS2P3-208ENST00000533167 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
PMS2P3-208ENST00000533167 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
PMS2P3-208ENST00000533167 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
PMS2P3-208ENST00000533167 APLP2Q06481 763 aa13.31□□□□□ -0.28
PMS2P3-208ENST00000533167 TROQ12816 1431 aaPredicted RBP13.3□□□□□ -0.28
PMS2P3-208ENST00000533167 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
PMS2P3-208ENST00000533167 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
PMS2P3-208ENST00000533167 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
PMS2P3-208ENST00000533167 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.29
PMS2P3-208ENST00000533167 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
PMS2P3-208ENST00000533167 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
PMS2P3-208ENST00000533167 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
PMS2P3-208ENST00000533167 PLEKHD1A6NEE1 506 aa13.24□□□□□ -0.29
PMS2P3-208ENST00000533167 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
PMS2P3-208ENST00000533167 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
PMS2P3-208ENST00000533167 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
PMS2P3-208ENST00000533167 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
PMS2P3-208ENST00000533167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
PMS2P3-208ENST00000533167 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
PMS2P3-208ENST00000533167 KIF14Q15058 1648 aa13.21□□□□□ -0.3
PMS2P3-208ENST00000533167 MAPKBP1O60336 1514 aa13.2□□□□□ -0.3
PMS2P3-208ENST00000533167 GPATCH8Q9UKJ3 1502 aaKnown RBP13.18□□□□□ -0.3
PMS2P3-208ENST00000533167 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
PMS2P3-208ENST00000533167 SUPT6HQ7KZ85 1726 aaKnown RBP13.17□□□□□ -0.3
PMS2P3-208ENST00000533167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.39e-7■■■□□ 17.5
PMS2P3-208ENST00000533167 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
PMS2P3-208ENST00000533167 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
PMS2P3-208ENST00000533167 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
PMS2P3-208ENST00000533167 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 TCOF1Q13428 1488 aaKnown RBP13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
PMS2P3-208ENST00000533167 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
PMS2P3-208ENST00000533167 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
PMS2P3-208ENST00000533167 PLCH2O75038 1416 aa13.11□□□□□ -0.31
PMS2P3-208ENST00000533167 GLI2P10070 1586 aa13.1□□□□□ -0.31
PMS2P3-208ENST00000533167 ARAP3Q8WWN8 1544 aa13.09□□□□□ -0.31
PMS2P3-208ENST00000533167 ZNF644Q9H582 1327 aaPredicted RBP13.08□□□□□ -0.32
PMS2P3-208ENST00000533167 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
PMS2P3-208ENST00000533167 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
PMS2P3-208ENST00000533167 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
PMS2P3-208ENST00000533167 CFDP1Q9UEE9 299 aaPredicted RBP13.06□□□□□ -0.32
PMS2P3-208ENST00000533167 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms