RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
PMS2P3-208ENST00000533167 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
PMS2P3-208ENST00000533167 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
PMS2P3-208ENST00000533167 ABCC9O60706 1549 aa16.88■□□□□ 0.29
PMS2P3-208ENST00000533167 DCAF1Q9Y4B6 1507 aa16.7■□□□□ 0.26
PMS2P3-208ENST00000533167 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
PMS2P3-208ENST00000533167 NACADO15069 1562 aa16.51■□□□□ 0.23
PMS2P3-208ENST00000533167 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
PMS2P3-208ENST00000533167 RB1CC1Q8TDY2 1594 aa16.38■□□□□ 0.21
PMS2P3-208ENST00000533167 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
PMS2P3-208ENST00000533167 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
PMS2P3-208ENST00000533167 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
PMS2P3-208ENST00000533167 UNC13AQ9UPW8 1703 aa15.97■□□□□ 0.15
PMS2P3-208ENST00000533167 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
PMS2P3-208ENST00000533167 CECR2Q9BXF3 1484 aa15.67■□□□□ 0.1
PMS2P3-208ENST00000533167 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
PMS2P3-208ENST00000533167 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
PMS2P3-208ENST00000533167 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.07
PMS2P3-208ENST00000533167 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
PMS2P3-208ENST00000533167 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
PMS2P3-208ENST00000533167 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
PMS2P3-208ENST00000533167 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
PMS2P3-208ENST00000533167 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
PMS2P3-208ENST00000533167 WIZO95785 1651 aa15.32■□□□□ 0.04
PMS2P3-208ENST00000533167 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
PMS2P3-208ENST00000533167 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
PMS2P3-208ENST00000533167 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
PMS2P3-208ENST00000533167 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
PMS2P3-208ENST00000533167 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
PMS2P3-208ENST00000533167 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
PMS2P3-208ENST00000533167 BAZ1BQ9UIG0 1483 aaKnown RBP15.18■□□□□ 0.02
PMS2P3-208ENST00000533167 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
PMS2P3-208ENST00000533167 CFTRP13569 1480 aa14.87□□□□□ -0.03
PMS2P3-208ENST00000533167 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
PMS2P3-208ENST00000533167 NESP48681 1621 aa14.77□□□□□ -0.05
PMS2P3-208ENST00000533167 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
PMS2P3-208ENST00000533167 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
PMS2P3-208ENST00000533167 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
PMS2P3-208ENST00000533167 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
PMS2P3-208ENST00000533167 PRDM2Q13029 1718 aa14.6□□□□□ -0.07
PMS2P3-208ENST00000533167 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
PMS2P3-208ENST00000533167 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
PMS2P3-208ENST00000533167 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
PMS2P3-208ENST00000533167 CUX1P39880 1505 aa14.55□□□□□ -0.08
PMS2P3-208ENST00000533167 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
PMS2P3-208ENST00000533167 URB2Q14146 1524 aaKnown RBP14.51□□□□□ -0.09
PMS2P3-208ENST00000533167 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
PMS2P3-208ENST00000533167 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
PMS2P3-208ENST00000533167 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
PMS2P3-208ENST00000533167 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
PMS2P3-208ENST00000533167 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
PMS2P3-208ENST00000533167 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
PMS2P3-208ENST00000533167 DNMBPQ6XZF7 1577 aa14.46□□□□□ -0.09
PMS2P3-208ENST00000533167 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
PMS2P3-208ENST00000533167 WDR62O43379 1518 aa14.43□□□□□ -0.1
PMS2P3-208ENST00000533167 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
PMS2P3-208ENST00000533167 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
PMS2P3-208ENST00000533167 POLA1P09884 1462 aaPredicted RBP14.39□□□□□ -0.11
PMS2P3-208ENST00000533167 CUX2O14529 1486 aa14.36□□□□□ -0.11
PMS2P3-208ENST00000533167 SOGA1O94964 1423 aa14.33□□□□□ -0.11
PMS2P3-208ENST00000533167 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
PMS2P3-208ENST00000533167 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
PMS2P3-208ENST00000533167 RUSC2Q8N2Y8 1516 aa14.3□□□□□ -0.12
PMS2P3-208ENST00000533167 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
PMS2P3-208ENST00000533167 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
PMS2P3-208ENST00000533167 EEA1Q15075 1411 aa14.24□□□□□ -0.13
PMS2P3-208ENST00000533167 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
PMS2P3-208ENST00000533167 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
PMS2P3-208ENST00000533167 TDRD9Q8NDG6 1382 aaKnown RBP14.2□□□□□ -0.14
PMS2P3-208ENST00000533167 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
PMS2P3-208ENST00000533167 IGF1RP08069 1367 aa14.19□□□□□ -0.14
PMS2P3-208ENST00000533167 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
PMS2P3-208ENST00000533167 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
PMS2P3-208ENST00000533167 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■■■■■ 33.7
PMS2P3-208ENST00000533167 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
PMS2P3-208ENST00000533167 GAPVD1Q14C86 1478 aa14.14□□□□□ -0.15
PMS2P3-208ENST00000533167 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
PMS2P3-208ENST00000533167 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
PMS2P3-208ENST00000533167 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
PMS2P3-208ENST00000533167 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
PMS2P3-208ENST00000533167 CARMIL1Q5VZK9 1371 aa14.06□□□□□ -0.16
PMS2P3-208ENST00000533167 KIF21BO75037 1637 aa14.04□□□□□ -0.16
PMS2P3-208ENST00000533167 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
PMS2P3-208ENST00000533167 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
PMS2P3-208ENST00000533167 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
PMS2P3-208ENST00000533167 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
PMS2P3-208ENST00000533167 ADAMTS12P58397 1594 aa14□□□□□ -0.17
PMS2P3-208ENST00000533167 MAGI1Q96QZ7 1491 aaPredicted RBP14□□□□□ -0.17
PMS2P3-208ENST00000533167 GOLGA3Q08378 1498 aa13.99□□□□□ -0.17
PMS2P3-208ENST00000533167 CUL7Q14999 1698 aa13.99□□□□□ -0.17
PMS2P3-208ENST00000533167 PBRM1Q86U86 1689 aa13.99□□□□□ -0.17
PMS2P3-208ENST00000533167 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
PMS2P3-208ENST00000533167 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
PMS2P3-208ENST00000533167 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
PMS2P3-208ENST00000533167 NUP160Q12769 1436 aa13.9□□□□□ -0.19
PMS2P3-208ENST00000533167 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
PMS2P3-208ENST00000533167 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
PMS2P3-208ENST00000533167 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
PMS2P3-208ENST00000533167 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
PMS2P3-208ENST00000533167 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms