RNA–Protein interactions for RNA: ENST00000532957.5

KCNH2-206, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 2

Gene KCNH2, Length 3,374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-206ENST00000532957 ERCC6Q03468 1493 aa26.71■■□□□ 1.87
KCNH2-206ENST00000532957 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.87
KCNH2-206ENST00000532957 ARAP1Q96P48 1450 aa26.7■■□□□ 1.86
KCNH2-206ENST00000532957 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.864e-7■■■■■ 32.2
KCNH2-206ENST00000532957 FHOD3Q2V2M9 1422 aa26.63■■□□□ 1.85
KCNH2-206ENST00000532957 DNMBPQ6XZF7 1577 aa26.56■■□□□ 1.84
KCNH2-206ENST00000532957 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
KCNH2-206ENST00000532957 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
KCNH2-206ENST00000532957 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
KCNH2-206ENST00000532957 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
KCNH2-206ENST00000532957 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
KCNH2-206ENST00000532957 KIF21AQ7Z4S6 1674 aa26.46■■□□□ 1.83
KCNH2-206ENST00000532957 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
KCNH2-206ENST00000532957 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
KCNH2-206ENST00000532957 PRDM2Q13029 1718 aa26.36■■□□□ 1.81
KCNH2-206ENST00000532957 PRKCSHP14314 528 aaPredicted RBP26.35■■□□□ 1.81
KCNH2-206ENST00000532957 BCL11AQ9H165 835 aa26.35■■□□□ 1.81
KCNH2-206ENST00000532957 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
KCNH2-206ENST00000532957 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
KCNH2-206ENST00000532957 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
KCNH2-206ENST00000532957 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
KCNH2-206ENST00000532957 ZNF777Q9ULD5 760 aaPredicted RBP26.19■■□□□ 1.78
KCNH2-206ENST00000532957 PHLDB1Q86UU1 1377 aa26.18■■□□□ 1.78
KCNH2-206ENST00000532957 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
KCNH2-206ENST00000532957 BCANQ96GW7 911 aa26.12■■□□□ 1.77
KCNH2-206ENST00000532957 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
KCNH2-206ENST00000532957 SUPT16HQ9Y5B9 1047 aaKnown RBP26.11■■□□□ 1.77
KCNH2-206ENST00000532957 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
KCNH2-206ENST00000532957 SIN3AQ96ST3 1273 aa26.06■■□□□ 1.76
KCNH2-206ENST00000532957 TRIM52Q96A61 297 aa26.05■■□□□ 1.76
KCNH2-206ENST00000532957 PCF11O94913 1555 aaKnown RBP26.05■■□□□ 1.76
KCNH2-206ENST00000532957 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
KCNH2-206ENST00000532957 LRRC9Q6ZRR7 1453 aa26.02■■□□□ 1.76
KCNH2-206ENST00000532957 FMN1Q68DA7 1419 aa26.01■■□□□ 1.75
KCNH2-206ENST00000532957 HIRIP3Q9BW71 556 aaPredicted RBP26.01■■□□□ 1.75
KCNH2-206ENST00000532957 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
KCNH2-206ENST00000532957 KCNH8Q96L42 1107 aa25.99■■□□□ 1.75
KCNH2-206ENST00000532957 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
KCNH2-206ENST00000532957 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
KCNH2-206ENST00000532957 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
KCNH2-206ENST00000532957 TIAM1Q13009 1591 aa25.94■■□□□ 1.74
KCNH2-206ENST00000532957 ABCA5Q8WWZ7 1642 aa25.94■■□□□ 1.74
KCNH2-206ENST00000532957 CUL7Q14999 1698 aa25.94■■□□□ 1.74
KCNH2-206ENST00000532957 DHX57Q6P158 1386 aaKnown RBP25.9■■□□□ 1.74
KCNH2-206ENST00000532957 CASKIN1Q8WXD9 1431 aa25.89■■□□□ 1.74
KCNH2-206ENST00000532957 ZNF644Q9H582 1327 aaPredicted RBP25.89■■□□□ 1.74
KCNH2-206ENST00000532957 TSHZ2Q9NRE2 1034 aa25.86■■□□□ 1.73
KCNH2-206ENST00000532957 CDK13Q14004 1512 aaKnown RBP25.85■■□□□ 1.73
KCNH2-206ENST00000532957 FOXD1Q16676 465 aa25.84■■□□□ 1.73
KCNH2-206ENST00000532957 RRBP1Q9P2E9 1410 aaKnown RBP25.84■■□□□ 1.73
KCNH2-206ENST00000532957 CDK11AQ9UQ88 783 aaPredicted RBP25.79■■□□□ 1.72
KCNH2-206ENST00000532957 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
KCNH2-206ENST00000532957 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
KCNH2-206ENST00000532957 WDR62O43379 1518 aa25.78■■□□□ 1.72
KCNH2-206ENST00000532957 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
KCNH2-206ENST00000532957 CTTNBP2Q8WZ74 1663 aa25.77■■□□□ 1.72
KCNH2-206ENST00000532957 IQGAP2Q13576 1575 aa25.77■■□□□ 1.72
KCNH2-206ENST00000532957 GRIN2AQ12879 1464 aa25.76■■□□□ 1.71
KCNH2-206ENST00000532957 EFCAB5A4FU69 1503 aa25.76■■□□□ 1.71
KCNH2-206ENST00000532957 SETD5Q9C0A6 1442 aa25.76■■□□□ 1.71
KCNH2-206ENST00000532957 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
KCNH2-206ENST00000532957 FKBP8Q14318 412 aa25.75■■□□□ 1.71
KCNH2-206ENST00000532957 DDX10Q13206 875 aaKnown RBP25.75■■□□□ 1.71
KCNH2-206ENST00000532957 CFDP1Q9UEE9 299 aaPredicted RBP25.74■■□□□ 1.71
KCNH2-206ENST00000532957 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
KCNH2-206ENST00000532957 NCOA2Q15596 1464 aa25.73■■□□□ 1.71
KCNH2-206ENST00000532957 FGD6Q6ZV73 1430 aa25.71■■□□□ 1.71
KCNH2-206ENST00000532957 CNGB1Q14028 1251 aaPredicted RBP25.71■■□□□ 1.71
KCNH2-206ENST00000532957 PLB1Q6P1J6 1458 aa25.71■■□□□ 1.71
KCNH2-206ENST00000532957 PLEKHD1A6NEE1 506 aa25.7■■□□□ 1.71
KCNH2-206ENST00000532957 MYT1LQ9UL68 1186 aa25.65■■□□□ 1.7
KCNH2-206ENST00000532957 KIAA0586Q9BVV6 1533 aa25.65■■□□□ 1.7
KCNH2-206ENST00000532957 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
KCNH2-206ENST00000532957 ZNF326Q5BKZ1 582 aaKnown RBP25.64■■□□□ 1.7
KCNH2-206ENST00000532957 ANP32EQ9BTT0 268 aa25.64■■□□□ 1.7
KCNH2-206ENST00000532957 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
KCNH2-206ENST00000532957 CLSPNQ9HAW4 1339 aa25.61■■□□□ 1.69
KCNH2-206ENST00000532957 EPRSP07814 1512 aaKnown RBP25.61■■□□□ 1.69
KCNH2-206ENST00000532957 CARMIL2Q6F5E8 1435 aa25.61■■□□□ 1.69
KCNH2-206ENST00000532957 PTPRKQ15262 1439 aa25.6■■□□□ 1.69
KCNH2-206ENST00000532957 THOC2Q8NI27 1593 aaKnown RBP25.59■■□□□ 1.69
KCNH2-206ENST00000532957 MYOM3Q5VTT5 1437 aa25.59■■□□□ 1.69
KCNH2-206ENST00000532957 MAGI3Q5TCQ9 1506 aa25.56■■□□□ 1.68
KCNH2-206ENST00000532957 NEFLP07196 543 aa25.55■■□□□ 1.68
KCNH2-206ENST00000532957 HNRNPMP52272 730 aaKnown RBP eCLIP25.54■■□□□ 1.685e-7■■■■□ 25.9
KCNH2-206ENST00000532957 DISP1Q96F81 1524 aa25.54■■□□□ 1.68
KCNH2-206ENST00000532957 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
KCNH2-206ENST00000532957 PTPRGP23470 1445 aa25.53■■□□□ 1.68
KCNH2-206ENST00000532957 MAGI1Q96QZ7 1491 aaPredicted RBP25.52■■□□□ 1.68
KCNH2-206ENST00000532957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
KCNH2-206ENST00000532957 SAMD9Q5K651 1589 aa25.51■■□□□ 1.68
KCNH2-206ENST00000532957 TONSLQ96HA7 1378 aa25.51■■□□□ 1.67
KCNH2-206ENST00000532957 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
KCNH2-206ENST00000532957 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
KCNH2-206ENST00000532957 MAP3K1Q13233 1512 aa25.46■■□□□ 1.67
KCNH2-206ENST00000532957 CCDC18Q5T9S5 1454 aa25.45■■□□□ 1.67
KCNH2-206ENST00000532957 CFAP43Q8NDM7 1665 aa25.45■■□□□ 1.67
KCNH2-206ENST00000532957 NUP153P49790 1475 aaKnown RBP25.45■■□□□ 1.66
KCNH2-206ENST00000532957 HECW1Q76N89 1606 aa25.42■■□□□ 1.66
KCNH2-206ENST00000532957 KIAA0556O60303 1618 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms