RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ARHGEF11O15085 1522 aa36.66■■■■□ 3.46
LRRK1-208ENST00000532029 RIMBP3CA6NJZ7 1639 aa36.64■■■■□ 3.46
LRRK1-208ENST00000532029 RIMBP3BA6NNM3 1639 aa36.64■■■■□ 3.46
LRRK1-208ENST00000532029 RIMBP3Q9UFD9 1639 aa36.64■■■■□ 3.46
LRRK1-208ENST00000532029 SHROOM2Q13796 1616 aa36.63■■■■□ 3.45
LRRK1-208ENST00000532029 JPH4Q96JJ6 628 aa36.63■■■■□ 3.45
LRRK1-208ENST00000532029 IQGAP2Q13576 1575 aa36.61■■■■□ 3.45
LRRK1-208ENST00000532029 CTTNBP2Q8WZ74 1663 aa36.59■■■■□ 3.45
LRRK1-208ENST00000532029 GOLGA3Q08378 1498 aa36.56■■■■□ 3.44
LRRK1-208ENST00000532029 EHMT2Q96KQ7 1210 aa36.54■■■■□ 3.44
LRRK1-208ENST00000532029 PRG4Q92954 1404 aaPredicted RBP36.53■■■■□ 3.44
LRRK1-208ENST00000532029 ERCC6L2Q5T890 1561 aa36.46■■■■□ 3.43
LRRK1-208ENST00000532029 UBTFP17480 764 aaKnown RBP36.45■■■■□ 3.43
LRRK1-208ENST00000532029 UGGT2Q9NYU1 1516 aa36.41■■■■□ 3.42
LRRK1-208ENST00000532029 ARAP1Q96P48 1450 aa36.39■■■■□ 3.42
LRRK1-208ENST00000532029 CARMIL2Q6F5E8 1435 aa36.39■■■■□ 3.42
LRRK1-208ENST00000532029 CYB5RLQ6IPT4 315 aa36.38■■■■□ 3.41
LRRK1-208ENST00000532029 DISP1Q96F81 1524 aa36.29■■■■□ 3.4
LRRK1-208ENST00000532029 KIAA0556O60303 1618 aa36.25■■■■□ 3.39
LRRK1-208ENST00000532029 RANGAP1P46060 587 aaPredicted RBP36.24■■■■□ 3.39
LRRK1-208ENST00000532029 TNIKQ9UKE5 1360 aa36.22■■■■□ 3.39
LRRK1-208ENST00000532029 TTBK1Q5TCY1 1321 aaPredicted RBP36.16■■■■□ 3.38
LRRK1-208ENST00000532029 PTPRGP23470 1445 aa36.16■■■■□ 3.38
LRRK1-208ENST00000532029 SAMD9Q5K651 1589 aa36.13■■■■□ 3.37
LRRK1-208ENST00000532029 P3H3Q8IVL6 736 aa36.11■■■■□ 3.37
LRRK1-208ENST00000532029 EFCAB5A4FU69 1503 aa36.09■■■■□ 3.37
LRRK1-208ENST00000532029 LOC105371045A0A1W2PR82 267 aa36.07■■■■□ 3.36
LRRK1-208ENST00000532029 FHOD3Q2V2M9 1422 aa35.97■■■■□ 3.35
LRRK1-208ENST00000532029 ARHGAP35Q9NRY4 1499 aa35.94■■■■□ 3.34
LRRK1-208ENST00000532029 UACAQ9BZF9 1416 aa35.92■■■■□ 3.34
LRRK1-208ENST00000532029 CLIP1P30622 1438 aa35.91■■■■□ 3.34
LRRK1-208ENST00000532029 ADCY10Q96PN6 1610 aa35.89■■■■□ 3.34
LRRK1-208ENST00000532029 UHRF1BP1LA0JNW5 1464 aa35.86■■■■□ 3.33
LRRK1-208ENST00000532029 ABCC2Q92887 1545 aa35.85■■■■□ 3.33
LRRK1-208ENST00000532029 PLB1Q6P1J6 1458 aa35.85■■■■□ 3.33
LRRK1-208ENST00000532029 CEP162Q5TB80 1403 aa35.83■■■■□ 3.33
LRRK1-208ENST00000532029 NPM1P06748 294 aaKnown RBP eCLIP35.83■■■■□ 3.33
LRRK1-208ENST00000532029 ABCA8O94911 1581 aa35.81■■■■□ 3.32
LRRK1-208ENST00000532029 FMN1Q68DA7 1419 aa35.76■■■■□ 3.32
LRRK1-208ENST00000532029 RAPGEF6Q8TEU7 1601 aa35.73■■■■□ 3.31
LRRK1-208ENST00000532029 TRHP20396 242 aaPredicted RBP35.71■■■■□ 3.31
LRRK1-208ENST00000532029 KDM5BQ9UGL1 1544 aa35.67■■■■□ 3.3
LRRK1-208ENST00000532029 ZCCHC11Q5TAX3 1644 aaKnown RBP35.61■■■■□ 3.29
LRRK1-208ENST00000532029 MAPKBP1O60336 1514 aa35.6■■■■□ 3.29
LRRK1-208ENST00000532029 ARID3CA6NKF2 412 aa35.59■■■■□ 3.29
LRRK1-208ENST00000532029 NUP153P49790 1475 aaKnown RBP35.58■■■■□ 3.29
LRRK1-208ENST00000532029 ATP1B4Q9UN42 357 aaPredicted RBP35.57■■■■□ 3.28
LRRK1-208ENST00000532029 HECW1Q76N89 1606 aa35.54■■■■□ 3.28
LRRK1-208ENST00000532029 ATP10BO94823 1461 aa35.53■■■■□ 3.28
LRRK1-208ENST00000532029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.51■■■■□ 3.28
LRRK1-208ENST00000532029 HNRNPUL2Q1KMD3 747 aaKnown RBP35.51■■■■□ 3.28
LRRK1-208ENST00000532029 ASXL2Q76L83 1435 aa35.5■■■■□ 3.27
LRRK1-208ENST00000532029 CASKIN1Q8WXD9 1431 aa35.5■■■■□ 3.27
LRRK1-208ENST00000532029 PCF11O94913 1555 aaKnown RBP35.5■■■■□ 3.27
LRRK1-208ENST00000532029 FYCO1Q9BQS8 1478 aa35.45■■■■□ 3.27
LRRK1-208ENST00000532029 EPRSP07814 1512 aaKnown RBP35.41■■■■□ 3.26
LRRK1-208ENST00000532029 CDK13Q14004 1512 aaKnown RBP35.39■■■■□ 3.26
LRRK1-208ENST00000532029 WDR7Q9Y4E6 1490 aa35.39■■■■□ 3.26
LRRK1-208ENST00000532029 ABCC10Q5T3U5 1492 aa35.38■■■■□ 3.25
LRRK1-208ENST00000532029 VPS8Q8N3P4 1428 aa35.38■■■■□ 3.25
LRRK1-208ENST00000532029 CCDC18Q5T9S5 1454 aa35.35■■■■□ 3.25
LRRK1-208ENST00000532029 DIP2BQ9P265 1576 aa35.33■■■■□ 3.25
LRRK1-208ENST00000532029 PLEKHD1A6NEE1 506 aa35.32■■■■□ 3.24
LRRK1-208ENST00000532029 FAM69CQ0P6D2 419 aa35.32■■■■□ 3.24
LRRK1-208ENST00000532029 LRRIQ1Q96JM4 1722 aa35.3■■■■□ 3.24
LRRK1-208ENST00000532029 CDK11AQ9UQ88 783 aaPredicted RBP35.29■■■■□ 3.24
LRRK1-208ENST00000532029 KCNH8Q96L42 1107 aa35.28■■■■□ 3.24
LRRK1-208ENST00000532029 KIF13AQ9H1H9 1805 aa35.26■■■■□ 3.24
LRRK1-208ENST00000532029 GLI2P10070 1586 aa35.22■■■■□ 3.23
LRRK1-208ENST00000532029 TROQ12816 1431 aaPredicted RBP35.14■■■■□ 3.22
LRRK1-208ENST00000532029 MAP3K4Q9Y6R4 1608 aa35.06■■■■□ 3.2
LRRK1-208ENST00000532029 CFAP43Q8NDM7 1665 aa35.06■■■■□ 3.2
LRRK1-208ENST00000532029 APLP2Q06481 763 aa35.06■■■■□ 3.2
LRRK1-208ENST00000532029 TIAM1Q13009 1591 aa35.05■■■■□ 3.2
LRRK1-208ENST00000532029 MAGI3Q5TCQ9 1506 aa35.05■■■■□ 3.2
LRRK1-208ENST00000532029 MTUS2Q5JR59 1369 aa35.04■■■■□ 3.2
LRRK1-208ENST00000532029 ABCA9Q8IUA7 1624 aa35.04■■■■□ 3.2
LRRK1-208ENST00000532029 CD109Q6YHK3 1445 aa35.04■■■■□ 3.2
LRRK1-208ENST00000532029 KIF14Q15058 1648 aa35.03■■■■□ 3.2
LRRK1-208ENST00000532029 TSPOAP1O95153 1857 aa35.01■■■■□ 3.19
LRRK1-208ENST00000532029 MAP3K1Q13233 1512 aa35■■■■□ 3.19
LRRK1-208ENST00000532029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.99■■■■□ 3.19
LRRK1-208ENST00000532029 EHBP1L1Q8N3D4 1523 aa34.96■■■■□ 3.19
LRRK1-208ENST00000532029 TTC37Q6PGP7 1564 aa34.95■■■■□ 3.18
LRRK1-208ENST00000532029 TEX14Q8IWB6 1497 aa34.93■■■■□ 3.18
LRRK1-208ENST00000532029 PPRC1Q5VV67 1664 aaKnown RBP34.92■■■■□ 3.18
LRRK1-208ENST00000532029 LRRC9Q6ZRR7 1453 aa34.89■■■■□ 3.18
LRRK1-208ENST00000532029 KANK4Q5T7N3 995 aaPredicted RBP34.83■■■■□ 3.17
LRRK1-208ENST00000532029 MYO5CQ9NQX4 1742 aa34.81■■■■□ 3.16
LRRK1-208ENST00000532029 SUPT6HQ7KZ85 1726 aaKnown RBP34.81■■■■□ 3.16
LRRK1-208ENST00000532029 PLCH2O75038 1416 aa34.81■■■■□ 3.16
LRRK1-208ENST00000532029 CCNB3Q8WWL7 1395 aa34.75■■■■□ 3.15
LRRK1-208ENST00000532029 NCOA2Q15596 1464 aa34.75■■■■□ 3.15
LRRK1-208ENST00000532029 ARAP3Q8WWN8 1544 aa34.75■■■■□ 3.15
LRRK1-208ENST00000532029 NEO1Q92859 1461 aa34.74■■■■□ 3.15
LRRK1-208ENST00000532029 FANCAO15360 1455 aa34.73■■■■□ 3.15
LRRK1-208ENST00000532029 CFAP74Q9C0B2 1584 aa34.73■■■■□ 3.15
LRRK1-208ENST00000532029 ARHGAP5Q13017 1502 aa34.72■■■■□ 3.15
LRRK1-208ENST00000532029 PHLDB1Q86UU1 1377 aa34.72■■■■□ 3.15
LRRK1-208ENST00000532029 PREX2Q70Z35 1606 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms