RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 PRG4Q92954 1404 aaPredicted RBP29.02■■■□□ 2.24
GSDMD-210ENST00000531173 JPH4Q96JJ6 628 aa29■■■□□ 2.23
GSDMD-210ENST00000531173 KIAA0586Q9BVV6 1533 aa28.93■■■□□ 2.22
GSDMD-210ENST00000531173 CARMIL1Q5VZK9 1371 aa28.86■■■□□ 2.21
GSDMD-210ENST00000531173 ADCY10Q96PN6 1610 aa28.72■■■□□ 2.19
GSDMD-210ENST00000531173 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
GSDMD-210ENST00000531173 IQGAP2Q13576 1575 aa28.67■■■□□ 2.18
GSDMD-210ENST00000531173 MAPKBP1O60336 1514 aa28.64■■■□□ 2.18
GSDMD-210ENST00000531173 RAPGEF2Q9Y4G8 1499 aa28.63■■■□□ 2.17
GSDMD-210ENST00000531173 PTPRGP23470 1445 aa28.57■■■□□ 2.16
GSDMD-210ENST00000531173 ABCC10Q5T3U5 1492 aa28.57■■■□□ 2.16
GSDMD-210ENST00000531173 DISP1Q96F81 1524 aa28.56■■■□□ 2.16
GSDMD-210ENST00000531173 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
GSDMD-210ENST00000531173 TNIKQ9UKE5 1360 aa28.54■■■□□ 2.16
GSDMD-210ENST00000531173 UGGT2Q9NYU1 1516 aa28.53■■■□□ 2.16
GSDMD-210ENST00000531173 DIP2BQ9P265 1576 aa28.52■■■□□ 2.16
GSDMD-210ENST00000531173 NPM1P06748 294 aaKnown RBP eCLIP28.5■■■□□ 2.15
GSDMD-210ENST00000531173 PRXQ9BXM0 1461 aa28.46■■■□□ 2.15
GSDMD-210ENST00000531173 UHRF1BP1LA0JNW5 1464 aa28.45■■■□□ 2.14
GSDMD-210ENST00000531173 ABCC2Q92887 1545 aa28.44■■■□□ 2.14
GSDMD-210ENST00000531173 FAM69CQ0P6D2 419 aa28.44■■■□□ 2.14
GSDMD-210ENST00000531173 KIAA0556O60303 1618 aa28.42■■■□□ 2.14
GSDMD-210ENST00000531173 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
GSDMD-210ENST00000531173 UACAQ9BZF9 1416 aa28.38■■■□□ 2.13
GSDMD-210ENST00000531173 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
GSDMD-210ENST00000531173 ASXL2Q76L83 1435 aa28.31■■■□□ 2.12
GSDMD-210ENST00000531173 KDM5BQ9UGL1 1544 aa28.31■■■□□ 2.12
GSDMD-210ENST00000531173 PLB1Q6P1J6 1458 aa28.27■■■□□ 2.12
GSDMD-210ENST00000531173 TSPOAP1O95153 1857 aa28.26■■■□□ 2.11
GSDMD-210ENST00000531173 GLI2P10070 1586 aa28.25■■■□□ 2.11
GSDMD-210ENST00000531173 GOLGA3Q08378 1498 aa28.23■■■□□ 2.11
GSDMD-210ENST00000531173 ZCCHC11Q5TAX3 1644 aaKnown RBP28.22■■■□□ 2.11
GSDMD-210ENST00000531173 PPRC1Q5VV67 1664 aaKnown RBP28.2■■■□□ 2.11
GSDMD-210ENST00000531173 CSRNP3Q8WYN3 585 aa28.18■■■□□ 2.1
GSDMD-210ENST00000531173 ABCA8O94911 1581 aa28.17■■■□□ 2.1
GSDMD-210ENST00000531173 EPRSP07814 1512 aaKnown RBP28.16■■■□□ 2.1
GSDMD-210ENST00000531173 KDM6BO15054 1643 aa28.15■■■□□ 2.1
GSDMD-210ENST00000531173 EEA1Q15075 1411 aa28.12■■■□□ 2.09
GSDMD-210ENST00000531173 MAP3K4Q9Y6R4 1608 aa28.11■■■□□ 2.09
GSDMD-210ENST00000531173 WDR7Q9Y4E6 1490 aa28.07■■■□□ 2.08
GSDMD-210ENST00000531173 SAMD9Q5K651 1589 aa28.07■■■□□ 2.08
GSDMD-210ENST00000531173 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
GSDMD-210ENST00000531173 COL17A1Q9UMD9 1497 aaPredicted RBP27.98■■■□□ 2.07
GSDMD-210ENST00000531173 P3H3Q8IVL6 736 aa27.94■■■□□ 2.06
GSDMD-210ENST00000531173 KIF21BO75037 1637 aa27.93■■■□□ 2.06
GSDMD-210ENST00000531173 TEX14Q8IWB6 1497 aa27.93■■■□□ 2.06
GSDMD-210ENST00000531173 ATP10BO94823 1461 aa27.91■■■□□ 2.06
GSDMD-210ENST00000531173 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
GSDMD-210ENST00000531173 FAM9AQ8IZU1 332 aaPredicted RBP27.88■■■□□ 2.05
GSDMD-210ENST00000531173 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
GSDMD-210ENST00000531173 RAPGEF6Q8TEU7 1601 aa27.85■■■□□ 2.05
GSDMD-210ENST00000531173 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
GSDMD-210ENST00000531173 KDM4FA0A1W2PPD8 638 aa27.84■■■□□ 2.05
GSDMD-210ENST00000531173 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
GSDMD-210ENST00000531173 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
GSDMD-210ENST00000531173 FHOD3Q2V2M9 1422 aa27.81■■■□□ 2.04
GSDMD-210ENST00000531173 NUP153P49790 1475 aaKnown RBP27.8■■■□□ 2.04
GSDMD-210ENST00000531173 ARID3CA6NKF2 412 aa27.79■■■□□ 2.04
GSDMD-210ENST00000531173 EFCAB5A4FU69 1503 aa27.77■■■□□ 2.04
GSDMD-210ENST00000531173 ABCA9Q8IUA7 1624 aa27.74■■■□□ 2.03
GSDMD-210ENST00000531173 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
GSDMD-210ENST00000531173 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
GSDMD-210ENST00000531173 ADGRL1O94910 1474 aa27.64■■■□□ 2.02
GSDMD-210ENST00000531173 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
GSDMD-210ENST00000531173 PHLDB1Q86UU1 1377 aa27.57■■■□□ 2
GSDMD-210ENST00000531173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
GSDMD-210ENST00000531173 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
GSDMD-210ENST00000531173 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
GSDMD-210ENST00000531173 NEO1Q92859 1461 aa27.56■■■□□ 2
GSDMD-210ENST00000531173 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
GSDMD-210ENST00000531173 CDK13Q14004 1512 aaKnown RBP27.51■■□□□ 1.99
GSDMD-210ENST00000531173 PLEKHD1A6NEE1 506 aa27.5■■□□□ 1.99
GSDMD-210ENST00000531173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.49■■□□□ 1.99
GSDMD-210ENST00000531173 FMN1Q68DA7 1419 aa27.49■■□□□ 1.99
GSDMD-210ENST00000531173 FRMPD1Q5SYB0 1578 aa27.48■■□□□ 1.99
GSDMD-210ENST00000531173 TTC37Q6PGP7 1564 aa27.47■■□□□ 1.99
GSDMD-210ENST00000531173 HECW1Q76N89 1606 aa27.44■■□□□ 1.98
GSDMD-210ENST00000531173 RAPGEF3O95398 923 aa27.42■■□□□ 1.98
GSDMD-210ENST00000531173 RICTORQ6R327 1708 aa27.38■■□□□ 1.97
GSDMD-210ENST00000531173 FANCAO15360 1455 aa27.38■■□□□ 1.97
GSDMD-210ENST00000531173 LRRIQ1Q96JM4 1722 aa27.37■■□□□ 1.97
GSDMD-210ENST00000531173 AKNAQ7Z591 1439 aa27.36■■□□□ 1.97
GSDMD-210ENST00000531173 CFAP74Q9C0B2 1584 aa27.35■■□□□ 1.97
GSDMD-210ENST00000531173 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
GSDMD-210ENST00000531173 PLCH2O75038 1416 aa27.31■■□□□ 1.96
GSDMD-210ENST00000531173 ADAMTSL3P82987 1691 aa27.28■■□□□ 1.96
GSDMD-210ENST00000531173 KIF14Q15058 1648 aa27.28■■□□□ 1.96
GSDMD-210ENST00000531173 ARHGEF40Q8TER5 1519 aa27.28■■□□□ 1.96
GSDMD-210ENST00000531173 ZMYM4Q5VZL5 1548 aa27.27■■□□□ 1.96
GSDMD-210ENST00000531173 TROQ12816 1431 aaPredicted RBP27.25■■□□□ 1.95
GSDMD-210ENST00000531173 CASKIN1Q8WXD9 1431 aa27.25■■□□□ 1.95
GSDMD-210ENST00000531173 ATP1B4Q9UN42 357 aaPredicted RBP27.25■■□□□ 1.95
GSDMD-210ENST00000531173 PCF11O94913 1555 aaKnown RBP27.25■■□□□ 1.95
GSDMD-210ENST00000531173 MYO5CQ9NQX4 1742 aa27.24■■□□□ 1.95
GSDMD-210ENST00000531173 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
GSDMD-210ENST00000531173 BCORL1Q5H9F3 1711 aa27.21■■□□□ 1.95
GSDMD-210ENST00000531173 HECW2Q9P2P5 1572 aa27.21■■□□□ 1.95
GSDMD-210ENST00000531173 POGZQ7Z3K3 1410 aa27.19■■□□□ 1.94
GSDMD-210ENST00000531173 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
GSDMD-210ENST00000531173 SIGLEC1Q9BZZ2 1709 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms