RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 NISCHQ9Y2I1 1504 aa41.65■■■■■ 4.26
GSDMD-210ENST00000531173 CCDC180Q9P1Z9 1646 aa37.29■■■■□ 3.56
GSDMD-210ENST00000531173 ABCC9O60706 1549 aa36.98■■■■□ 3.51
GSDMD-210ENST00000531173 RB1CC1Q8TDY2 1594 aa35.33■■■■□ 3.25
GSDMD-210ENST00000531173 NACADO15069 1562 aa35.18■■■■□ 3.22
GSDMD-210ENST00000531173 MYO15BQ96JP2 1530 aa34.85■■■■□ 3.17
GSDMD-210ENST00000531173 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
GSDMD-210ENST00000531173 UNC13AQ9UPW8 1703 aa34.63■■■■□ 3.13
GSDMD-210ENST00000531173 ZCCHC6Q5VYS8 1495 aaKnown RBP34.59■■■■□ 3.13
GSDMD-210ENST00000531173 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
GSDMD-210ENST00000531173 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
GSDMD-210ENST00000531173 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.115e-7■■■■■ 27.2
GSDMD-210ENST00000531173 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
GSDMD-210ENST00000531173 SHROOM4Q9ULL8 1493 aa33.93■■■■□ 3.02
GSDMD-210ENST00000531173 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
GSDMD-210ENST00000531173 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
GSDMD-210ENST00000531173 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
GSDMD-210ENST00000531173 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
GSDMD-210ENST00000531173 NCAPD3P42695 1498 aa32.5■■■□□ 2.79
GSDMD-210ENST00000531173 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
GSDMD-210ENST00000531173 ATAD2BQ9ULI0 1458 aa32.41■■■□□ 2.78
GSDMD-210ENST00000531173 SMARCA2P51531 1590 aa32.31■■■□□ 2.76
GSDMD-210ENST00000531173 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
GSDMD-210ENST00000531173 HMGXB3Q12766 1538 aa32.28■■■□□ 2.76
GSDMD-210ENST00000531173 PEG3Q9GZU2 1588 aa32.19■■■□□ 2.74
GSDMD-210ENST00000531173 MROH2BQ7Z745 1585 aa32.1■■■□□ 2.73
GSDMD-210ENST00000531173 BAZ1BQ9UIG0 1483 aaKnown RBP32.06■■■□□ 2.72
GSDMD-210ENST00000531173 NESP48681 1621 aa31.89■■■□□ 2.7
GSDMD-210ENST00000531173 ERCC6Q03468 1493 aa31.86■■■□□ 2.69
GSDMD-210ENST00000531173 CUX2O14529 1486 aa31.82■■■□□ 2.68
GSDMD-210ENST00000531173 WIZO95785 1651 aa31.71■■■□□ 2.67
GSDMD-210ENST00000531173 LAMC3Q9Y6N6 1575 aa31.69■■■□□ 2.66
GSDMD-210ENST00000531173 THOC2Q8NI27 1593 aaKnown RBP31.56■■■□□ 2.64
GSDMD-210ENST00000531173 DNAJC5Q9H3Z4 198 aa31.54■■■□□ 2.64
GSDMD-210ENST00000531173 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
GSDMD-210ENST00000531173 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
GSDMD-210ENST00000531173 CADPSQ9ULU8 1353 aa31.48■■■□□ 2.63
GSDMD-210ENST00000531173 PDS5BQ9NTI5 1447 aa31.46■■■□□ 2.63
GSDMD-210ENST00000531173 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
GSDMD-210ENST00000531173 CFTRP13569 1480 aa31.21■■■□□ 2.59
GSDMD-210ENST00000531173 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
GSDMD-210ENST00000531173 WDR62O43379 1518 aa31.17■■■□□ 2.58
GSDMD-210ENST00000531173 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
GSDMD-210ENST00000531173 CEP164Q9UPV0 1460 aa31.1■■■□□ 2.57
GSDMD-210ENST00000531173 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
GSDMD-210ENST00000531173 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
GSDMD-210ENST00000531173 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
GSDMD-210ENST00000531173 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
GSDMD-210ENST00000531173 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
GSDMD-210ENST00000531173 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
GSDMD-210ENST00000531173 DNMBPQ6XZF7 1577 aa30.48■■■□□ 2.47
GSDMD-210ENST00000531173 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.47
GSDMD-210ENST00000531173 OSCARQ8IYS5 282 aa30.34■■■□□ 2.45
GSDMD-210ENST00000531173 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
GSDMD-210ENST00000531173 EIF4G3O43432 1585 aaKnown RBP30.28■■■□□ 2.44
GSDMD-210ENST00000531173 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
GSDMD-210ENST00000531173 AQRO60306 1485 aaKnown RBP eCLIP30.18■■■□□ 2.42
GSDMD-210ENST00000531173 CUX1P39880 1505 aa30.15■■■□□ 2.42
GSDMD-210ENST00000531173 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
GSDMD-210ENST00000531173 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
GSDMD-210ENST00000531173 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
GSDMD-210ENST00000531173 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
GSDMD-210ENST00000531173 SOGA1O94964 1423 aa30.08■■■□□ 2.41
GSDMD-210ENST00000531173 CHD1O14646 1710 aa30.02■■■□□ 2.4
GSDMD-210ENST00000531173 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
GSDMD-210ENST00000531173 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
GSDMD-210ENST00000531173 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
GSDMD-210ENST00000531173 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
GSDMD-210ENST00000531173 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
GSDMD-210ENST00000531173 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
GSDMD-210ENST00000531173 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
GSDMD-210ENST00000531173 MAGI1Q96QZ7 1491 aaPredicted RBP29.82■■■□□ 2.36
GSDMD-210ENST00000531173 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
GSDMD-210ENST00000531173 ABCA10Q8WWZ4 1543 aa29.8■■■□□ 2.36
GSDMD-210ENST00000531173 FBLN2P98095 1184 aa29.79■■■□□ 2.36
GSDMD-210ENST00000531173 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
GSDMD-210ENST00000531173 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
GSDMD-210ENST00000531173 PBRM1Q86U86 1689 aa29.74■■■□□ 2.35
GSDMD-210ENST00000531173 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
GSDMD-210ENST00000531173 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
GSDMD-210ENST00000531173 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
GSDMD-210ENST00000531173 SYNJ2O15056 1496 aa29.72■■■□□ 2.35
GSDMD-210ENST00000531173 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
GSDMD-210ENST00000531173 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
GSDMD-210ENST00000531173 CHMP7Q8WUX9 453 aaPredicted RBP29.66■■■□□ 2.34
GSDMD-210ENST00000531173 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
GSDMD-210ENST00000531173 CYB5RLQ6IPT4 315 aa29.59■■■□□ 2.33
GSDMD-210ENST00000531173 ADAMTS12P58397 1594 aa29.5■■■□□ 2.31
GSDMD-210ENST00000531173 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
GSDMD-210ENST00000531173 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
GSDMD-210ENST00000531173 NUP160Q12769 1436 aa29.39■■■□□ 2.3
GSDMD-210ENST00000531173 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
GSDMD-210ENST00000531173 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
GSDMD-210ENST00000531173 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
GSDMD-210ENST00000531173 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.28
GSDMD-210ENST00000531173 TRHP20396 242 aaPredicted RBP29.1■■■□□ 2.25
GSDMD-210ENST00000531173 IGF1RP08069 1367 aa29.1■■■□□ 2.25
GSDMD-210ENST00000531173 KIF27Q86VH2 1401 aa29.08■■■□□ 2.25
GSDMD-210ENST00000531173 RUSC2Q8N2Y8 1516 aa29.08■■■□□ 2.25
GSDMD-210ENST00000531173 CUL7Q14999 1698 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms