RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
SRPRA-204ENST00000530680 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
SRPRA-204ENST00000530680 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
SRPRA-204ENST00000530680 CEP170Q5SW79 1584 aa24.45■■□□□ 1.5
SRPRA-204ENST00000530680 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
SRPRA-204ENST00000530680 ERCC6L2Q5T890 1561 aa24.41■■□□□ 1.5
SRPRA-204ENST00000530680 KIF21BO75037 1637 aa24.4■■□□□ 1.5
SRPRA-204ENST00000530680 NUP160Q12769 1436 aa24.39■■□□□ 1.5
SRPRA-204ENST00000530680 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
SRPRA-204ENST00000530680 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
SRPRA-204ENST00000530680 IQGAP2Q13576 1575 aa24.29■■□□□ 1.48
SRPRA-204ENST00000530680 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
SRPRA-204ENST00000530680 KIAA0586Q9BVV6 1533 aa24.27■■□□□ 1.48
SRPRA-204ENST00000530680 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
SRPRA-204ENST00000530680 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
SRPRA-204ENST00000530680 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
SRPRA-204ENST00000530680 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
SRPRA-204ENST00000530680 JPH4Q96JJ6 628 aa24.13■■□□□ 1.45
SRPRA-204ENST00000530680 UGGT2Q9NYU1 1516 aa24.09■■□□□ 1.45
SRPRA-204ENST00000530680 CARMIL2Q6F5E8 1435 aa24.09■■□□□ 1.45
SRPRA-204ENST00000530680 KIAA0556O60303 1618 aa24.04■■□□□ 1.44
SRPRA-204ENST00000530680 RANGAP1P46060 587 aaPredicted RBP24.04■■□□□ 1.44
SRPRA-204ENST00000530680 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
SRPRA-204ENST00000530680 MAPKBP1O60336 1514 aa24■■□□□ 1.43
SRPRA-204ENST00000530680 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
SRPRA-204ENST00000530680 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
SRPRA-204ENST00000530680 SAMD9Q5K651 1589 aa23.96■■□□□ 1.43
SRPRA-204ENST00000530680 DIP2BQ9P265 1576 aa23.96■■□□□ 1.43
SRPRA-204ENST00000530680 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
SRPRA-204ENST00000530680 TTBK1Q5TCY1 1321 aaPredicted RBP23.95■■□□□ 1.42
SRPRA-204ENST00000530680 NPM1P06748 294 aaKnown RBP eCLIP23.95■■□□□ 1.42
SRPRA-204ENST00000530680 ADCY10Q96PN6 1610 aa23.95■■□□□ 1.42
SRPRA-204ENST00000530680 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
SRPRA-204ENST00000530680 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
SRPRA-204ENST00000530680 PTPRGP23470 1445 aa23.87■■□□□ 1.41
SRPRA-204ENST00000530680 P3H3Q8IVL6 736 aa23.87■■□□□ 1.41
SRPRA-204ENST00000530680 KDM6BO15054 1643 aa23.86■■□□□ 1.41
SRPRA-204ENST00000530680 CLIP1P30622 1438 aa23.84■■□□□ 1.41
SRPRA-204ENST00000530680 TSPOAP1O95153 1857 aa23.83■■□□□ 1.41
SRPRA-204ENST00000530680 FHOD3Q2V2M9 1422 aa23.83■■□□□ 1.4
SRPRA-204ENST00000530680 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
SRPRA-204ENST00000530680 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
SRPRA-204ENST00000530680 UACAQ9BZF9 1416 aa23.73■■□□□ 1.39
SRPRA-204ENST00000530680 ABCC2Q92887 1545 aa23.72■■□□□ 1.39
SRPRA-204ENST00000530680 RAPGEF6Q8TEU7 1601 aa23.72■■□□□ 1.39
SRPRA-204ENST00000530680 FMN1Q68DA7 1419 aa23.71■■□□□ 1.39
SRPRA-204ENST00000530680 KDM4FA0A1W2PPD8 638 aa23.7■■□□□ 1.38
SRPRA-204ENST00000530680 PLB1Q6P1J6 1458 aa23.69■■□□□ 1.38
SRPRA-204ENST00000530680 ABCA8O94911 1581 aa23.69■■□□□ 1.38
SRPRA-204ENST00000530680 UHRF1BP1LA0JNW5 1464 aa23.67■■□□□ 1.38
SRPRA-204ENST00000530680 HECW1Q76N89 1606 aa23.64■■□□□ 1.38
SRPRA-204ENST00000530680 PPRC1Q5VV67 1664 aaKnown RBP23.61■■□□□ 1.37
SRPRA-204ENST00000530680 ATP1B4Q9UN42 357 aaPredicted RBP23.61■■□□□ 1.37
SRPRA-204ENST00000530680 ZCCHC11Q5TAX3 1644 aaKnown RBP23.61■■□□□ 1.37
SRPRA-204ENST00000530680 PCF11O94913 1555 aaKnown RBP23.61■■□□□ 1.37
SRPRA-204ENST00000530680 GLI2P10070 1586 aa23.61■■□□□ 1.37
SRPRA-204ENST00000530680 ASXL2Q76L83 1435 aa23.59■■□□□ 1.37
SRPRA-204ENST00000530680 ARID3CA6NKF2 412 aa23.55■■□□□ 1.36
SRPRA-204ENST00000530680 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
SRPRA-204ENST00000530680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
SRPRA-204ENST00000530680 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
SRPRA-204ENST00000530680 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
SRPRA-204ENST00000530680 NUP153P49790 1475 aaKnown RBP23.53■■□□□ 1.36
SRPRA-204ENST00000530680 CASKIN1Q8WXD9 1431 aa23.51■■□□□ 1.35
SRPRA-204ENST00000530680 VPS8Q8N3P4 1428 aa23.49■■□□□ 1.35
SRPRA-204ENST00000530680 ADGRL1O94910 1474 aa23.49■■□□□ 1.35
SRPRA-204ENST00000530680 MAP3K4Q9Y6R4 1608 aa23.48■■□□□ 1.35
SRPRA-204ENST00000530680 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
SRPRA-204ENST00000530680 EPRSP07814 1512 aaKnown RBP23.46■■□□□ 1.35
SRPRA-204ENST00000530680 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
SRPRA-204ENST00000530680 CDK13Q14004 1512 aaKnown RBP23.45■■□□□ 1.34
SRPRA-204ENST00000530680 ATP10BO94823 1461 aa23.45■■□□□ 1.34
SRPRA-204ENST00000530680 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
SRPRA-204ENST00000530680 COL17A1Q9UMD9 1497 aaPredicted RBP23.42■■□□□ 1.34
SRPRA-204ENST00000530680 WDR7Q9Y4E6 1490 aa23.41■■□□□ 1.34
SRPRA-204ENST00000530680 ILDR1Q86SU0 546 aaPredicted RBP23.38■■□□□ 1.33
SRPRA-204ENST00000530680 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
SRPRA-204ENST00000530680 CFAP43Q8NDM7 1665 aa23.37■■□□□ 1.33
SRPRA-204ENST00000530680 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
SRPRA-204ENST00000530680 APLP2Q06481 763 aa23.33■■□□□ 1.33
SRPRA-204ENST00000530680 KCNH8Q96L42 1107 aa23.3■■□□□ 1.32
SRPRA-204ENST00000530680 HECW2Q9P2P5 1572 aa23.3■■□□□ 1.32
SRPRA-204ENST00000530680 KIF14Q15058 1648 aa23.3■■□□□ 1.32
SRPRA-204ENST00000530680 TIAM1Q13009 1591 aa23.29■■□□□ 1.32
SRPRA-204ENST00000530680 MTUS2Q5JR59 1369 aa23.26■■□□□ 1.31
SRPRA-204ENST00000530680 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
SRPRA-204ENST00000530680 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
SRPRA-204ENST00000530680 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
SRPRA-204ENST00000530680 ABCA9Q8IUA7 1624 aa23.21■■□□□ 1.31
SRPRA-204ENST00000530680 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
SRPRA-204ENST00000530680 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
SRPRA-204ENST00000530680 SUPT6HQ7KZ85 1726 aaKnown RBP23.18■■□□□ 1.3
SRPRA-204ENST00000530680 MYO5CQ9NQX4 1742 aa23.18■■□□□ 1.3
SRPRA-204ENST00000530680 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
SRPRA-204ENST00000530680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.32e-7■■□□□ 12.7
SRPRA-204ENST00000530680 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
SRPRA-204ENST00000530680 CFAP74Q9C0B2 1584 aa23.1■■□□□ 1.29
SRPRA-204ENST00000530680 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
SRPRA-204ENST00000530680 PREX2Q70Z35 1606 aa23.07■■□□□ 1.28
SRPRA-204ENST00000530680 CDC42BPAQ5VT25 1732 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms