RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
SRPRA-204ENST00000530680 CCDC180Q9P1Z9 1646 aa31.24■■■□□ 2.59
SRPRA-204ENST00000530680 ABCC9O60706 1549 aa31.15■■■□□ 2.58
SRPRA-204ENST00000530680 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
SRPRA-204ENST00000530680 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
SRPRA-204ENST00000530680 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.3
SRPRA-204ENST00000530680 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
SRPRA-204ENST00000530680 NACADO15069 1562 aa29.24■■■□□ 2.27
SRPRA-204ENST00000530680 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
SRPRA-204ENST00000530680 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
SRPRA-204ENST00000530680 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
SRPRA-204ENST00000530680 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
SRPRA-204ENST00000530680 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
SRPRA-204ENST00000530680 SCRIBQ14160 1630 aa28.55■■■□□ 2.16
SRPRA-204ENST00000530680 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
SRPRA-204ENST00000530680 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
SRPRA-204ENST00000530680 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
SRPRA-204ENST00000530680 EIF4G1Q04637 1599 aaKnown RBP28.01■■■□□ 2.07
SRPRA-204ENST00000530680 DNAJC5Q9H3Z4 198 aa27.35■■□□□ 1.97
SRPRA-204ENST00000530680 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
SRPRA-204ENST00000530680 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
SRPRA-204ENST00000530680 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
SRPRA-204ENST00000530680 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
SRPRA-204ENST00000530680 CUX2O14529 1486 aa27.02■■□□□ 1.92
SRPRA-204ENST00000530680 NCAPD3P42695 1498 aa26.96■■□□□ 1.91
SRPRA-204ENST00000530680 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
SRPRA-204ENST00000530680 PEG3Q9GZU2 1588 aa26.95■■□□□ 1.9
SRPRA-204ENST00000530680 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
SRPRA-204ENST00000530680 WIZO95785 1651 aa26.91■■□□□ 1.9
SRPRA-204ENST00000530680 RSF1Q96T23 1441 aaPredicted RBP26.89■■□□□ 1.89
SRPRA-204ENST00000530680 HMGXB3Q12766 1538 aa26.87■■□□□ 1.89
SRPRA-204ENST00000530680 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
SRPRA-204ENST00000530680 NESP48681 1621 aa26.65■■□□□ 1.86
SRPRA-204ENST00000530680 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
SRPRA-204ENST00000530680 SUPT5HO00267 1087 aaKnown RBP26.57■■□□□ 1.84
SRPRA-204ENST00000530680 THOC2Q8NI27 1593 aaKnown RBP26.51■■□□□ 1.83
SRPRA-204ENST00000530680 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
SRPRA-204ENST00000530680 KIF21AQ7Z4S6 1674 aa26.37■■□□□ 1.81
SRPRA-204ENST00000530680 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
SRPRA-204ENST00000530680 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
SRPRA-204ENST00000530680 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
SRPRA-204ENST00000530680 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
SRPRA-204ENST00000530680 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
SRPRA-204ENST00000530680 WDR62O43379 1518 aa26.05■■□□□ 1.76
SRPRA-204ENST00000530680 CFTRP13569 1480 aa26.04■■□□□ 1.76
SRPRA-204ENST00000530680 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
SRPRA-204ENST00000530680 CEP164Q9UPV0 1460 aa25.92■■□□□ 1.74
SRPRA-204ENST00000530680 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
SRPRA-204ENST00000530680 OSCARQ8IYS5 282 aa25.68■■□□□ 1.7
SRPRA-204ENST00000530680 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
SRPRA-204ENST00000530680 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
SRPRA-204ENST00000530680 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
SRPRA-204ENST00000530680 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
SRPRA-204ENST00000530680 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
SRPRA-204ENST00000530680 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
SRPRA-204ENST00000530680 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
SRPRA-204ENST00000530680 CUX1P39880 1505 aa25.43■■□□□ 1.66
SRPRA-204ENST00000530680 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
SRPRA-204ENST00000530680 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
SRPRA-204ENST00000530680 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
SRPRA-204ENST00000530680 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
SRPRA-204ENST00000530680 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
SRPRA-204ENST00000530680 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
SRPRA-204ENST00000530680 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
SRPRA-204ENST00000530680 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
SRPRA-204ENST00000530680 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
SRPRA-204ENST00000530680 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
SRPRA-204ENST00000530680 SOGA1O94964 1423 aa25.2■■□□□ 1.63
SRPRA-204ENST00000530680 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
SRPRA-204ENST00000530680 CHD1O14646 1710 aa25.18■■□□□ 1.62
SRPRA-204ENST00000530680 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
SRPRA-204ENST00000530680 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
SRPRA-204ENST00000530680 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.618e-7■■■□□ 16.1
SRPRA-204ENST00000530680 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
SRPRA-204ENST00000530680 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
SRPRA-204ENST00000530680 ARAP1Q96P48 1450 aa25.03■■□□□ 1.6
SRPRA-204ENST00000530680 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
SRPRA-204ENST00000530680 PBRM1Q86U86 1689 aa25■■□□□ 1.59
SRPRA-204ENST00000530680 FBLN2P98095 1184 aa24.99■■□□□ 1.59
SRPRA-204ENST00000530680 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
SRPRA-204ENST00000530680 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
SRPRA-204ENST00000530680 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
SRPRA-204ENST00000530680 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
SRPRA-204ENST00000530680 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
SRPRA-204ENST00000530680 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
SRPRA-204ENST00000530680 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
SRPRA-204ENST00000530680 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
SRPRA-204ENST00000530680 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
SRPRA-204ENST00000530680 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
SRPRA-204ENST00000530680 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
SRPRA-204ENST00000530680 ADAMTS12P58397 1594 aa24.75■■□□□ 1.55
SRPRA-204ENST00000530680 CUL7Q14999 1698 aa24.75■■□□□ 1.55
SRPRA-204ENST00000530680 SYNJ2O15056 1496 aa24.71■■□□□ 1.55
SRPRA-204ENST00000530680 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
SRPRA-204ENST00000530680 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
SRPRA-204ENST00000530680 EEA1Q15075 1411 aa24.66■■□□□ 1.54
SRPRA-204ENST00000530680 IGF1RP08069 1367 aa24.61■■□□□ 1.53
SRPRA-204ENST00000530680 GRIN2AQ12879 1464 aa24.58■■□□□ 1.52
SRPRA-204ENST00000530680 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
SRPRA-204ENST00000530680 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms