RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
KDM2A-212ENST00000530342 MIER1Q8N108 512 aa15.07■□□□□ 0
KDM2A-212ENST00000530342 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
KDM2A-212ENST00000530342 CENPBP07199 599 aaPredicted RBP15.04■□□□□ -0
KDM2A-212ENST00000530342 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
KDM2A-212ENST00000530342 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
KDM2A-212ENST00000530342 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
KDM2A-212ENST00000530342 MAP3K1Q13233 1512 aa15.02□□□□□ -0.01
KDM2A-212ENST00000530342 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
KDM2A-212ENST00000530342 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
KDM2A-212ENST00000530342 WDR62O43379 1518 aa15□□□□□ -0.01
KDM2A-212ENST00000530342 TIAM1Q13009 1591 aa15□□□□□ -0.01
KDM2A-212ENST00000530342 LRRIQ1Q96JM4 1722 aa14.99□□□□□ -0.01
KDM2A-212ENST00000530342 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
KDM2A-212ENST00000530342 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
KDM2A-212ENST00000530342 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
KDM2A-212ENST00000530342 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
KDM2A-212ENST00000530342 WDR97A6NE52 1622 aa14.91□□□□□ -0.02
KDM2A-212ENST00000530342 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
KDM2A-212ENST00000530342 P3H3Q8IVL6 736 aa14.89□□□□□ -0.03
KDM2A-212ENST00000530342 IGF1RP08069 1367 aa14.89□□□□□ -0.03
KDM2A-212ENST00000530342 PCF11O94913 1555 aaKnown RBP14.88□□□□□ -0.03
KDM2A-212ENST00000530342 ABCA10Q8WWZ4 1543 aa14.88□□□□□ -0.03
KDM2A-212ENST00000530342 CTTNBP2Q8WZ74 1663 aa14.88□□□□□ -0.03
KDM2A-212ENST00000530342 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
KDM2A-212ENST00000530342 SNAPC4Q5SXM2 1469 aa14.84□□□□□ -0.03
KDM2A-212ENST00000530342 GRIN2BQ13224 1484 aa14.83□□□□□ -0.03
KDM2A-212ENST00000530342 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
KDM2A-212ENST00000530342 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
KDM2A-212ENST00000530342 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
KDM2A-212ENST00000530342 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
KDM2A-212ENST00000530342 KDM5BQ9UGL1 1544 aa14.8□□□□□ -0.04
KDM2A-212ENST00000530342 EIF4G3O43432 1585 aaKnown RBP14.8□□□□□ -0.04
KDM2A-212ENST00000530342 YTHDC1Q96MU7 727 aaKnown RBP14.78□□□□□ -0.04
KDM2A-212ENST00000530342 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
KDM2A-212ENST00000530342 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
KDM2A-212ENST00000530342 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
KDM2A-212ENST00000530342 RAB3GAP2Q9H2M9 1393 aa14.74□□□□□ -0.05
KDM2A-212ENST00000530342 SAMD9Q5K651 1589 aa14.74□□□□□ -0.05
KDM2A-212ENST00000530342 SUPT16HQ9Y5B9 1047 aaKnown RBP14.73□□□□□ -0.05
KDM2A-212ENST00000530342 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
KDM2A-212ENST00000530342 CUL7Q14999 1698 aa14.73□□□□□ -0.05
KDM2A-212ENST00000530342 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
KDM2A-212ENST00000530342 EFCAB5A4FU69 1503 aa14.69□□□□□ -0.06
KDM2A-212ENST00000530342 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
KDM2A-212ENST00000530342 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
KDM2A-212ENST00000530342 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
KDM2A-212ENST00000530342 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
KDM2A-212ENST00000530342 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
KDM2A-212ENST00000530342 GCC2Q8IWJ2 1684 aa14.66□□□□□ -0.06
KDM2A-212ENST00000530342 ERICH6Q7L0X2 663 aa14.65□□□□□ -0.06
KDM2A-212ENST00000530342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
KDM2A-212ENST00000530342 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
KDM2A-212ENST00000530342 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
KDM2A-212ENST00000530342 PTPN23Q9H3S7 1636 aa14.64□□□□□ -0.07
KDM2A-212ENST00000530342 PBRM1Q86U86 1689 aa14.64□□□□□ -0.07
KDM2A-212ENST00000530342 POLR1AO95602 1720 aaPredicted RBP14.64□□□□□ -0.07
KDM2A-212ENST00000530342 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
KDM2A-212ENST00000530342 KCNH8Q96L42 1107 aa14.63□□□□□ -0.07
KDM2A-212ENST00000530342 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
KDM2A-212ENST00000530342 HECW1Q76N89 1606 aa14.59□□□□□ -0.07
KDM2A-212ENST00000530342 ADAMTS12P58397 1594 aa14.59□□□□□ -0.07
KDM2A-212ENST00000530342 CASKIN1Q8WXD9 1431 aa14.59□□□□□ -0.07
KDM2A-212ENST00000530342 APLP2Q06481 763 aa14.59□□□□□ -0.07
KDM2A-212ENST00000530342 PPP1R15AO75807 674 aaPredicted RBP14.58□□□□□ -0.08
KDM2A-212ENST00000530342 TSHZ2Q9NRE2 1034 aa14.58□□□□□ -0.08
KDM2A-212ENST00000530342 CYB5RLQ6IPT4 315 aa14.57□□□□□ -0.08
KDM2A-212ENST00000530342 PTPRKQ15262 1439 aa14.57□□□□□ -0.08
KDM2A-212ENST00000530342 MAGI3Q5TCQ9 1506 aa14.56□□□□□ -0.08
KDM2A-212ENST00000530342 KDM6BO15054 1643 aa14.54□□□□□ -0.08
KDM2A-212ENST00000530342 CHD1O14646 1710 aa14.53□□□□□ -0.08
KDM2A-212ENST00000530342 FHOD3Q2V2M9 1422 aa14.52□□□□□ -0.08
KDM2A-212ENST00000530342 SUPT6HQ7KZ85 1726 aaKnown RBP14.52□□□□□ -0.09
KDM2A-212ENST00000530342 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.09
KDM2A-212ENST00000530342 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
KDM2A-212ENST00000530342 HFM1A2PYH4 1435 aa14.5□□□□□ -0.09
KDM2A-212ENST00000530342 FGD6Q6ZV73 1430 aa14.49□□□□□ -0.09
KDM2A-212ENST00000530342 KIAA0586Q9BVV6 1533 aa14.49□□□□□ -0.09
KDM2A-212ENST00000530342 CEP170Q5SW79 1584 aa14.48□□□□□ -0.09
KDM2A-212ENST00000530342 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
KDM2A-212ENST00000530342 TCOF1Q13428 1488 aaKnown RBP14.47□□□□□ -0.09
KDM2A-212ENST00000530342 CCDC18Q5T9S5 1454 aa14.46□□□□□ -0.09
KDM2A-212ENST00000530342 NUP160Q12769 1436 aa14.45□□□□□ -0.1
KDM2A-212ENST00000530342 NCOA2Q15596 1464 aa14.45□□□□□ -0.1
KDM2A-212ENST00000530342 NAIPQ13075 1403 aa14.44□□□□□ -0.1
KDM2A-212ENST00000530342 EHBP1L1Q8N3D4 1523 aa14.44□□□□□ -0.1
KDM2A-212ENST00000530342 IQGAP2Q13576 1575 aa14.44□□□□□ -0.1
KDM2A-212ENST00000530342 UACAQ9BZF9 1416 aa14.43□□□□□ -0.1
KDM2A-212ENST00000530342 SIN3AQ96ST3 1273 aa14.43□□□□□ -0.1
KDM2A-212ENST00000530342 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
KDM2A-212ENST00000530342 PTPRGP23470 1445 aa14.43□□□□□ -0.1
KDM2A-212ENST00000530342 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
KDM2A-212ENST00000530342 AKNAQ7Z591 1439 aa14.37□□□□□ -0.11
KDM2A-212ENST00000530342 ERCC6L2Q5T890 1561 aa14.37□□□□□ -0.11
KDM2A-212ENST00000530342 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
KDM2A-212ENST00000530342 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
KDM2A-212ENST00000530342 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
KDM2A-212ENST00000530342 CROCC2H7BZ55 1655 aa14.35□□□□□ -0.11
KDM2A-212ENST00000530342 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
KDM2A-212ENST00000530342 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms