RNA–Protein interactions for RNA: ENST00000530342.2

KDM2A-212, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-212ENST00000530342 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
KDM2A-212ENST00000530342 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
KDM2A-212ENST00000530342 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.49
KDM2A-212ENST00000530342 ABCC9O60706 1549 aa18.1■□□□□ 0.49
KDM2A-212ENST00000530342 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
KDM2A-212ENST00000530342 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.4
KDM2A-212ENST00000530342 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
KDM2A-212ENST00000530342 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
KDM2A-212ENST00000530342 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
KDM2A-212ENST00000530342 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
KDM2A-212ENST00000530342 NACADO15069 1562 aa17.14■□□□□ 0.33
KDM2A-212ENST00000530342 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
KDM2A-212ENST00000530342 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
KDM2A-212ENST00000530342 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
KDM2A-212ENST00000530342 HRCP23327 699 aa16.97■□□□□ 0.31
KDM2A-212ENST00000530342 UNC13AQ9UPW8 1703 aa16.61■□□□□ 0.25
KDM2A-212ENST00000530342 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
KDM2A-212ENST00000530342 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.25
KDM2A-212ENST00000530342 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
KDM2A-212ENST00000530342 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
KDM2A-212ENST00000530342 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
KDM2A-212ENST00000530342 LOC105371045A0A1W2PR82 267 aa16.48■□□□□ 0.23
KDM2A-212ENST00000530342 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
KDM2A-212ENST00000530342 WIZO95785 1651 aa16.34■□□□□ 0.21
KDM2A-212ENST00000530342 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
KDM2A-212ENST00000530342 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
KDM2A-212ENST00000530342 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
KDM2A-212ENST00000530342 TRIM26Q12899 539 aaPredicted RBP16.3■□□□□ 0.2
KDM2A-212ENST00000530342 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
KDM2A-212ENST00000530342 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
KDM2A-212ENST00000530342 ATAD2BQ9ULI0 1458 aa16.05■□□□□ 0.16
KDM2A-212ENST00000530342 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
KDM2A-212ENST00000530342 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
KDM2A-212ENST00000530342 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
KDM2A-212ENST00000530342 TRIM41Q8WV44 630 aa15.96■□□□□ 0.14
KDM2A-212ENST00000530342 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
KDM2A-212ENST00000530342 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
KDM2A-212ENST00000530342 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
KDM2A-212ENST00000530342 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
KDM2A-212ENST00000530342 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
KDM2A-212ENST00000530342 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
KDM2A-212ENST00000530342 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
KDM2A-212ENST00000530342 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
KDM2A-212ENST00000530342 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
KDM2A-212ENST00000530342 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
KDM2A-212ENST00000530342 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.1
KDM2A-212ENST00000530342 KIF21BO75037 1637 aa15.7■□□□□ 0.1
KDM2A-212ENST00000530342 SOGA1O94964 1423 aa15.69■□□□□ 0.1
KDM2A-212ENST00000530342 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
KDM2A-212ENST00000530342 NESP48681 1621 aa15.69■□□□□ 0.1
KDM2A-212ENST00000530342 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
KDM2A-212ENST00000530342 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
KDM2A-212ENST00000530342 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
KDM2A-212ENST00000530342 EEA1Q15075 1411 aa15.6■□□□□ 0.09
KDM2A-212ENST00000530342 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
KDM2A-212ENST00000530342 MYT1Q01538 1121 aa15.59■□□□□ 0.09
KDM2A-212ENST00000530342 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
KDM2A-212ENST00000530342 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
KDM2A-212ENST00000530342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
KDM2A-212ENST00000530342 GOLGA3Q08378 1498 aa15.52■□□□□ 0.07
KDM2A-212ENST00000530342 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
KDM2A-212ENST00000530342 NEUROD1Q13562 356 aa15.48■□□□□ 0.07
KDM2A-212ENST00000530342 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
KDM2A-212ENST00000530342 CFTRP13569 1480 aa15.47■□□□□ 0.07
KDM2A-212ENST00000530342 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
KDM2A-212ENST00000530342 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
KDM2A-212ENST00000530342 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
KDM2A-212ENST00000530342 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
KDM2A-212ENST00000530342 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
KDM2A-212ENST00000530342 CLIP1P30622 1438 aa15.34■□□□□ 0.05
KDM2A-212ENST00000530342 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
KDM2A-212ENST00000530342 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
KDM2A-212ENST00000530342 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
KDM2A-212ENST00000530342 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.05
KDM2A-212ENST00000530342 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
KDM2A-212ENST00000530342 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
KDM2A-212ENST00000530342 PRKCSHP14314 528 aaPredicted RBP15.3■□□□□ 0.04
KDM2A-212ENST00000530342 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
KDM2A-212ENST00000530342 PRXQ9BXM0 1461 aa15.26■□□□□ 0.03
KDM2A-212ENST00000530342 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
KDM2A-212ENST00000530342 CUX2O14529 1486 aa15.25■□□□□ 0.03
KDM2A-212ENST00000530342 RANGAP1P46060 587 aaPredicted RBP15.25■□□□□ 0.03
KDM2A-212ENST00000530342 FBLN2P98095 1184 aa15.24■□□□□ 0.03
KDM2A-212ENST00000530342 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
KDM2A-212ENST00000530342 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
KDM2A-212ENST00000530342 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
KDM2A-212ENST00000530342 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.02
KDM2A-212ENST00000530342 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
KDM2A-212ENST00000530342 CUX1P39880 1505 aa15.2■□□□□ 0.02
KDM2A-212ENST00000530342 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
KDM2A-212ENST00000530342 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
KDM2A-212ENST00000530342 FGD5Q6ZNL6 1462 aa15.17■□□□□ 0.02
KDM2A-212ENST00000530342 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
KDM2A-212ENST00000530342 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
KDM2A-212ENST00000530342 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
KDM2A-212ENST00000530342 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
KDM2A-212ENST00000530342 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
KDM2A-212ENST00000530342 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
KDM2A-212ENST00000530342 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.018e-7■■■■□ 25.7
KDM2A-212ENST00000530342 MAPKBP1O60336 1514 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms