RNA–Protein interactions for RNA: ENST00000529638.1

GPAA1-212, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 5

Gene GPAA1, Length 1,570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-212ENST00000529638 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
GPAA1-212ENST00000529638 FBLN2P98095 1184 aa28.49■■■□□ 2.15
GPAA1-212ENST00000529638 ARHGAP35Q9NRY4 1499 aa28.49■■■□□ 2.15
GPAA1-212ENST00000529638 NUP160Q12769 1436 aa28.47■■■□□ 2.15
GPAA1-212ENST00000529638 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
GPAA1-212ENST00000529638 KIAA0586Q9BVV6 1533 aa28.46■■■□□ 2.15
GPAA1-212ENST00000529638 EFCAB5A4FU69 1503 aa28.45■■■□□ 2.14
GPAA1-212ENST00000529638 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
GPAA1-212ENST00000529638 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
GPAA1-212ENST00000529638 VPS8Q8N3P4 1428 aa28.41■■■□□ 2.14
GPAA1-212ENST00000529638 CHD1O14646 1710 aa28.38■■■□□ 2.13
GPAA1-212ENST00000529638 SAMD9Q5K651 1589 aa28.35■■■□□ 2.13
GPAA1-212ENST00000529638 UGGT2Q9NYU1 1516 aa28.35■■■□□ 2.13
GPAA1-212ENST00000529638 FHOD3Q2V2M9 1422 aa28.27■■■□□ 2.12
GPAA1-212ENST00000529638 P3H3Q8IVL6 736 aa28.23■■■□□ 2.11
GPAA1-212ENST00000529638 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
GPAA1-212ENST00000529638 DISP1Q96F81 1524 aa28.18■■■□□ 2.1
GPAA1-212ENST00000529638 KIAA0556O60303 1618 aa28.18■■■□□ 2.1
GPAA1-212ENST00000529638 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
GPAA1-212ENST00000529638 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
GPAA1-212ENST00000529638 CARMIL2Q6F5E8 1435 aa28.13■■■□□ 2.09
GPAA1-212ENST00000529638 APLP2Q06481 763 aa28.09■■■□□ 2.09
GPAA1-212ENST00000529638 SHROOM2Q13796 1616 aa28.09■■■□□ 2.09
GPAA1-212ENST00000529638 CASKIN1Q8WXD9 1431 aa28.08■■■□□ 2.09
GPAA1-212ENST00000529638 PCF11O94913 1555 aaKnown RBP28.08■■■□□ 2.09
GPAA1-212ENST00000529638 FYCO1Q9BQS8 1478 aa28.07■■■□□ 2.08
GPAA1-212ENST00000529638 PRG4Q92954 1404 aaPredicted RBP28.04■■■□□ 2.08
GPAA1-212ENST00000529638 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
GPAA1-212ENST00000529638 OSCARQ8IYS5 282 aa27.96■■■□□ 2.07
GPAA1-212ENST00000529638 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.07
GPAA1-212ENST00000529638 TIAM1Q13009 1591 aa27.93■■■□□ 2.06
GPAA1-212ENST00000529638 HECW1Q76N89 1606 aa27.91■■■□□ 2.06
GPAA1-212ENST00000529638 ATP1B4Q9UN42 357 aaPredicted RBP27.9■■■□□ 2.06
GPAA1-212ENST00000529638 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
GPAA1-212ENST00000529638 TTBK1Q5TCY1 1321 aaPredicted RBP27.86■■■□□ 2.05
GPAA1-212ENST00000529638 RAPGEF6Q8TEU7 1601 aa27.85■■■□□ 2.05
GPAA1-212ENST00000529638 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
GPAA1-212ENST00000529638 PTPRGP23470 1445 aa27.84■■■□□ 2.05
GPAA1-212ENST00000529638 TRIM26Q12899 539 aaPredicted RBP27.84■■■□□ 2.05
GPAA1-212ENST00000529638 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
GPAA1-212ENST00000529638 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
GPAA1-212ENST00000529638 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
GPAA1-212ENST00000529638 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
GPAA1-212ENST00000529638 ABCA8O94911 1581 aa27.79■■■□□ 2.04
GPAA1-212ENST00000529638 EPRSP07814 1512 aaKnown RBP27.79■■■□□ 2.04
GPAA1-212ENST00000529638 NUP153P49790 1475 aaKnown RBP27.79■■■□□ 2.04
GPAA1-212ENST00000529638 LRRIQ1Q96JM4 1722 aa27.78■■■□□ 2.04
GPAA1-212ENST00000529638 CDK13Q14004 1512 aaKnown RBP27.7■■■□□ 2.03
GPAA1-212ENST00000529638 UACAQ9BZF9 1416 aa27.7■■■□□ 2.02
GPAA1-212ENST00000529638 PCGF6Q9BYE7 350 aa27.68■■■□□ 2.02
GPAA1-212ENST00000529638 MTUS2Q5JR59 1369 aa27.68■■■□□ 2.02
GPAA1-212ENST00000529638 EHBP1L1Q8N3D4 1523 aa27.67■■■□□ 2.02
GPAA1-212ENST00000529638 ABCC2Q92887 1545 aa27.63■■■□□ 2.01
GPAA1-212ENST00000529638 ARID3CA6NKF2 412 aa27.62■■■□□ 2.01
GPAA1-212ENST00000529638 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
GPAA1-212ENST00000529638 UHRF1BP1LA0JNW5 1464 aa27.6■■■□□ 2.01
GPAA1-212ENST00000529638 CDK11AQ9UQ88 783 aaPredicted RBP27.59■■■□□ 2.01
GPAA1-212ENST00000529638 ATP10BO94823 1461 aa27.58■■■□□ 2.01
GPAA1-212ENST00000529638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
GPAA1-212ENST00000529638 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
GPAA1-212ENST00000529638 SUPT6HQ7KZ85 1726 aaKnown RBP27.54■■■□□ 2
GPAA1-212ENST00000529638 NCOA2Q15596 1464 aa27.51■■■□□ 2
GPAA1-212ENST00000529638 ARHGEF11O15085 1522 aa27.51■■□□□ 1.99
GPAA1-212ENST00000529638 PHLDB1Q86UU1 1377 aa27.51■■□□□ 1.99
GPAA1-212ENST00000529638 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
GPAA1-212ENST00000529638 RRBP1Q9P2E9 1410 aaKnown RBP27.51■■□□□ 1.99
GPAA1-212ENST00000529638 KDM5BQ9UGL1 1544 aa27.47■■□□□ 1.99
GPAA1-212ENST00000529638 PLEKHD1A6NEE1 506 aa27.44■■□□□ 1.98
GPAA1-212ENST00000529638 ADCY10Q96PN6 1610 aa27.44■■□□□ 1.98
GPAA1-212ENST00000529638 CCNB3Q8WWL7 1395 aa27.43■■□□□ 1.98
GPAA1-212ENST00000529638 MYOM3Q5VTT5 1437 aa27.4■■□□□ 1.98
GPAA1-212ENST00000529638 ZCCHC11Q5TAX3 1644 aaKnown RBP27.39■■□□□ 1.98
GPAA1-212ENST00000529638 RIMBP3CA6NJZ7 1639 aa27.37■■□□□ 1.97
GPAA1-212ENST00000529638 RIMBP3BA6NNM3 1639 aa27.37■■□□□ 1.97
GPAA1-212ENST00000529638 RIMBP3Q9UFD9 1639 aa27.37■■□□□ 1.97
GPAA1-212ENST00000529638 FGD6Q6ZV73 1430 aa27.36■■□□□ 1.97
GPAA1-212ENST00000529638 KIF14Q15058 1648 aa27.35■■□□□ 1.97
GPAA1-212ENST00000529638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.31■■□□□ 1.96
GPAA1-212ENST00000529638 MIA2Q96PC5 1412 aa27.28■■□□□ 1.96
GPAA1-212ENST00000529638 ABCC10Q5T3U5 1492 aa27.28■■□□□ 1.96
GPAA1-212ENST00000529638 FAM50AQ14320 339 aaKnown RBP27.23■■□□□ 1.95
GPAA1-212ENST00000529638 ITSN2Q9NZM3 1697 aa27.23■■□□□ 1.95
GPAA1-212ENST00000529638 TCOF1Q13428 1488 aaKnown RBP27.23■■□□□ 1.95
GPAA1-212ENST00000529638 NPM1P06748 294 aaKnown RBP eCLIP27.22■■□□□ 1.95
GPAA1-212ENST00000529638 PTPN23Q9H3S7 1636 aa27.22■■□□□ 1.95
GPAA1-212ENST00000529638 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
GPAA1-212ENST00000529638 WDR7Q9Y4E6 1490 aa27.22■■□□□ 1.95
GPAA1-212ENST00000529638 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.94
GPAA1-212ENST00000529638 ASXL2Q76L83 1435 aa27.17■■□□□ 1.94
GPAA1-212ENST00000529638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.94
GPAA1-212ENST00000529638 TTC37Q6PGP7 1564 aa27.14■■□□□ 1.93
GPAA1-212ENST00000529638 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.93
GPAA1-212ENST00000529638 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
GPAA1-212ENST00000529638 KCNH8Q96L42 1107 aa27.13■■□□□ 1.93
GPAA1-212ENST00000529638 PREX2Q70Z35 1606 aa27.1■■□□□ 1.93
GPAA1-212ENST00000529638 ITGAEP38570 1179 aa27.09■■□□□ 1.93
GPAA1-212ENST00000529638 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
GPAA1-212ENST00000529638 CAMSAP2Q08AD1 1489 aa27.07■■□□□ 1.92
GPAA1-212ENST00000529638 MAPKBP1O60336 1514 aa27.07■■□□□ 1.92
GPAA1-212ENST00000529638 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms