RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
COPB1-206ENST00000529210 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
COPB1-206ENST00000529210 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
COPB1-206ENST00000529210 CARMIL1Q5VZK9 1371 aa20.77■□□□□ 0.92
COPB1-206ENST00000529210 PRG4Q92954 1404 aaPredicted RBP20.76■□□□□ 0.91
COPB1-206ENST00000529210 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
COPB1-206ENST00000529210 RAPGEF2Q9Y4G8 1499 aa20.63■□□□□ 0.89
COPB1-206ENST00000529210 IQGAP2Q13576 1575 aa20.6■□□□□ 0.89
COPB1-206ENST00000529210 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
COPB1-206ENST00000529210 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
COPB1-206ENST00000529210 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.88
COPB1-206ENST00000529210 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.87
COPB1-206ENST00000529210 TNIKQ9UKE5 1360 aa20.49■□□□□ 0.87
COPB1-206ENST00000529210 MAPKBP1O60336 1514 aa20.49■□□□□ 0.87
COPB1-206ENST00000529210 DISP1Q96F81 1524 aa20.49■□□□□ 0.87
COPB1-206ENST00000529210 PTPRGP23470 1445 aa20.47■□□□□ 0.87
COPB1-206ENST00000529210 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
COPB1-206ENST00000529210 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
COPB1-206ENST00000529210 EEA1Q15075 1411 aa20.43■□□□□ 0.86
COPB1-206ENST00000529210 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
COPB1-206ENST00000529210 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
COPB1-206ENST00000529210 NPM1P06748 294 aaKnown RBP eCLIP20.41■□□□□ 0.86
COPB1-206ENST00000529210 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
COPB1-206ENST00000529210 ABCC2Q92887 1545 aa20.37■□□□□ 0.85
COPB1-206ENST00000529210 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
COPB1-206ENST00000529210 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
COPB1-206ENST00000529210 DIP2BQ9P265 1576 aa20.36■□□□□ 0.85
COPB1-206ENST00000529210 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
COPB1-206ENST00000529210 KDM5BQ9UGL1 1544 aa20.3■□□□□ 0.84
COPB1-206ENST00000529210 FAM69CQ0P6D2 419 aa20.28■□□□□ 0.84
COPB1-206ENST00000529210 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.84
COPB1-206ENST00000529210 ASXL2Q76L83 1435 aa20.24■□□□□ 0.83
COPB1-206ENST00000529210 GLI2P10070 1586 aa20.24■□□□□ 0.83
COPB1-206ENST00000529210 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
COPB1-206ENST00000529210 ABCA8O94911 1581 aa20.23■□□□□ 0.83
COPB1-206ENST00000529210 KIF21BO75037 1637 aa20.22■□□□□ 0.83
COPB1-206ENST00000529210 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
COPB1-206ENST00000529210 SAMD9Q5K651 1589 aa20.21■□□□□ 0.83
COPB1-206ENST00000529210 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
COPB1-206ENST00000529210 PPRC1Q5VV67 1664 aaKnown RBP20.12■□□□□ 0.81
COPB1-206ENST00000529210 WDR7Q9Y4E6 1490 aa20.11■□□□□ 0.81
COPB1-206ENST00000529210 MAP3K4Q9Y6R4 1608 aa20.1■□□□□ 0.81
COPB1-206ENST00000529210 TSPOAP1O95153 1857 aa20.1■□□□□ 0.81
COPB1-206ENST00000529210 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
COPB1-206ENST00000529210 KDM6BO15054 1643 aa20.07■□□□□ 0.8
COPB1-206ENST00000529210 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
COPB1-206ENST00000529210 RAPGEF6Q8TEU7 1601 aa20.04■□□□□ 0.8
COPB1-206ENST00000529210 ATP10BO94823 1461 aa20.03■□□□□ 0.8
COPB1-206ENST00000529210 P3H3Q8IVL6 736 aa20.02■□□□□ 0.8
COPB1-206ENST00000529210 CFAP43Q8NDM7 1665 aa20.01■□□□□ 0.79
COPB1-206ENST00000529210 TEX14Q8IWB6 1497 aa20.01■□□□□ 0.79
COPB1-206ENST00000529210 FHOD3Q2V2M9 1422 aa19.99■□□□□ 0.79
COPB1-206ENST00000529210 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
COPB1-206ENST00000529210 NUP153P49790 1475 aaKnown RBP19.97■□□□□ 0.79
COPB1-206ENST00000529210 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
COPB1-206ENST00000529210 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
COPB1-206ENST00000529210 ABCA9Q8IUA7 1624 aa19.91■□□□□ 0.78
COPB1-206ENST00000529210 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
COPB1-206ENST00000529210 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
COPB1-206ENST00000529210 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
COPB1-206ENST00000529210 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
COPB1-206ENST00000529210 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
COPB1-206ENST00000529210 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
COPB1-206ENST00000529210 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.76
COPB1-206ENST00000529210 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
COPB1-206ENST00000529210 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
COPB1-206ENST00000529210 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
COPB1-206ENST00000529210 HECW1Q76N89 1606 aa19.79■□□□□ 0.76
COPB1-206ENST00000529210 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
COPB1-206ENST00000529210 NEO1Q92859 1461 aa19.78■□□□□ 0.76
COPB1-206ENST00000529210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
COPB1-206ENST00000529210 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
COPB1-206ENST00000529210 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
COPB1-206ENST00000529210 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
COPB1-206ENST00000529210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.754e-7■■■■□ 24.7
COPB1-206ENST00000529210 KDM4FA0A1W2PPD8 638 aa19.72■□□□□ 0.75
COPB1-206ENST00000529210 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
COPB1-206ENST00000529210 CFAP74Q9C0B2 1584 aa19.68■□□□□ 0.74
COPB1-206ENST00000529210 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
COPB1-206ENST00000529210 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
COPB1-206ENST00000529210 CDK11AQ9UQ88 783 aaPredicted RBP19.66■□□□□ 0.74
COPB1-206ENST00000529210 ADGRL1O94910 1474 aa19.65■□□□□ 0.74
COPB1-206ENST00000529210 CLIP1P30622 1438 aa19.64■□□□□ 0.73
COPB1-206ENST00000529210 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
COPB1-206ENST00000529210 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
COPB1-206ENST00000529210 FRMPD1Q5SYB0 1578 aa19.64■□□□□ 0.73
COPB1-206ENST00000529210 FANCAO15360 1455 aa19.63■□□□□ 0.73
COPB1-206ENST00000529210 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
COPB1-206ENST00000529210 PLCH2O75038 1416 aa19.62■□□□□ 0.73
COPB1-206ENST00000529210 AKNAQ7Z591 1439 aa19.62■□□□□ 0.73
COPB1-206ENST00000529210 FYCO1Q9BQS8 1478 aa19.61■□□□□ 0.73
COPB1-206ENST00000529210 RICTORQ6R327 1708 aa19.6■□□□□ 0.73
COPB1-206ENST00000529210 KIF14Q15058 1648 aa19.6■□□□□ 0.73
COPB1-206ENST00000529210 DENND4BO75064 1496 aaPredicted RBP19.59■□□□□ 0.73
COPB1-206ENST00000529210 RAPGEF3O95398 923 aa19.58■□□□□ 0.72
COPB1-206ENST00000529210 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
COPB1-206ENST00000529210 MYO5CQ9NQX4 1742 aa19.58■□□□□ 0.72
COPB1-206ENST00000529210 ZMYM4Q5VZL5 1548 aa19.56■□□□□ 0.72
COPB1-206ENST00000529210 ARHGEF40Q8TER5 1519 aa19.53■□□□□ 0.72
COPB1-206ENST00000529210 MAGI2Q86UL8 1455 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms