RNA–Protein interactions for RNA: ENST00000528482.6

AP004608.1-203, humanhuman

TSL 5 BASIC

Gene AP004608.1, Length 3,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-203ENST00000528482 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
AP004608.1-203ENST00000528482 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
AP004608.1-203ENST00000528482 ANP32CO43423 234 aa20.99■□□□□ 0.95
AP004608.1-203ENST00000528482 CCER2I3L3R5 266 aa20.98■□□□□ 0.95
AP004608.1-203ENST00000528482 MSH5O43196 834 aa20.97■□□□□ 0.95
AP004608.1-203ENST00000528482 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
AP004608.1-203ENST00000528482 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
AP004608.1-203ENST00000528482 CUX1P39880 1505 aa20.88■□□□□ 0.93
AP004608.1-203ENST00000528482 TIAM1Q13009 1591 aa20.88■□□□□ 0.93
AP004608.1-203ENST00000528482 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
AP004608.1-203ENST00000528482 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
AP004608.1-203ENST00000528482 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
AP004608.1-203ENST00000528482 IRX6P78412 446 aaPredicted RBP20.82■□□□□ 0.92
AP004608.1-203ENST00000528482 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
AP004608.1-203ENST00000528482 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
AP004608.1-203ENST00000528482 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
AP004608.1-203ENST00000528482 MAP3K1Q13233 1512 aa20.8■□□□□ 0.92
AP004608.1-203ENST00000528482 HNRNPUQ00839 825 aaKnown RBP eCLIP20.77■□□□□ 0.92
AP004608.1-203ENST00000528482 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
AP004608.1-203ENST00000528482 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
AP004608.1-203ENST00000528482 IGF1RP08069 1367 aa20.69■□□□□ 0.9
AP004608.1-203ENST00000528482 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
AP004608.1-203ENST00000528482 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
AP004608.1-203ENST00000528482 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
AP004608.1-203ENST00000528482 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
AP004608.1-203ENST00000528482 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
AP004608.1-203ENST00000528482 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
AP004608.1-203ENST00000528482 CFTRP13569 1480 aa20.58■□□□□ 0.88
AP004608.1-203ENST00000528482 ERICH6BQ5W0A0 696 aa20.57■□□□□ 0.88
AP004608.1-203ENST00000528482 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
AP004608.1-203ENST00000528482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.55■□□□□ 0.88
AP004608.1-203ENST00000528482 MYT1LQ9UL68 1186 aa20.53■□□□□ 0.88
AP004608.1-203ENST00000528482 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
AP004608.1-203ENST00000528482 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
AP004608.1-203ENST00000528482 NCAPD3P42695 1498 aa20.52■□□□□ 0.88
AP004608.1-203ENST00000528482 HMGXB3Q12766 1538 aa20.52■□□□□ 0.88
AP004608.1-203ENST00000528482 FHOD3Q2V2M9 1422 aa20.52■□□□□ 0.88
AP004608.1-203ENST00000528482 UACAQ9BZF9 1416 aa20.52■□□□□ 0.88
AP004608.1-203ENST00000528482 WASHC2AQ641Q2 1341 aa20.52■□□□□ 0.88
AP004608.1-203ENST00000528482 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
AP004608.1-203ENST00000528482 FGD6Q6ZV73 1430 aa20.49■□□□□ 0.87
AP004608.1-203ENST00000528482 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
AP004608.1-203ENST00000528482 HFM1A2PYH4 1435 aa20.47■□□□□ 0.87
AP004608.1-203ENST00000528482 PTPRKQ15262 1439 aa20.47■□□□□ 0.87
AP004608.1-203ENST00000528482 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
AP004608.1-203ENST00000528482 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
AP004608.1-203ENST00000528482 KDM5BQ9UGL1 1544 aa20.45■□□□□ 0.86
AP004608.1-203ENST00000528482 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
AP004608.1-203ENST00000528482 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
AP004608.1-203ENST00000528482 PTPN23Q9H3S7 1636 aa20.44■□□□□ 0.86
AP004608.1-203ENST00000528482 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.86
AP004608.1-203ENST00000528482 NBR1Q14596 966 aa20.41■□□□□ 0.86
AP004608.1-203ENST00000528482 NOP58Q9Y2X3 529 aaKnown RBP20.41■□□□□ 0.86
AP004608.1-203ENST00000528482 NAIPQ13075 1403 aa20.41■□□□□ 0.86
AP004608.1-203ENST00000528482 EIF4G2P78344 907 aaKnown RBP eCLIP20.4■□□□□ 0.86
AP004608.1-203ENST00000528482 MRS2Q9HD23 443 aa20.39■□□□□ 0.86
AP004608.1-203ENST00000528482 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
AP004608.1-203ENST00000528482 CNTLNQ9NXG0 1405 aa20.39■□□□□ 0.85
AP004608.1-203ENST00000528482 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
AP004608.1-203ENST00000528482 PAK3O75914 559 aaPredicted RBP20.37■□□□□ 0.85
AP004608.1-203ENST00000528482 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
AP004608.1-203ENST00000528482 NCOA2Q15596 1464 aa20.36■□□□□ 0.85
AP004608.1-203ENST00000528482 FMN1Q68DA7 1419 aa20.34■□□□□ 0.85
AP004608.1-203ENST00000528482 EFCAB5A4FU69 1503 aa20.34■□□□□ 0.85
AP004608.1-203ENST00000528482 C11orf95C9JLR9 678 aaPredicted RBP20.33■□□□□ 0.85
AP004608.1-203ENST00000528482 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
AP004608.1-203ENST00000528482 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
AP004608.1-203ENST00000528482 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
AP004608.1-203ENST00000528482 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
AP004608.1-203ENST00000528482 MYOM3Q5VTT5 1437 aa20.28■□□□□ 0.84
AP004608.1-203ENST00000528482 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
AP004608.1-203ENST00000528482 NCOA1Q15788 1441 aa20.26■□□□□ 0.83
AP004608.1-203ENST00000528482 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
AP004608.1-203ENST00000528482 L3MBTL2Q969R5 705 aa20.26■□□□□ 0.83
AP004608.1-203ENST00000528482 DENND4BO75064 1496 aaPredicted RBP20.23■□□□□ 0.83
AP004608.1-203ENST00000528482 ANP32AP39687 249 aaKnown RBP20.23■□□□□ 0.83
AP004608.1-203ENST00000528482 AKNAQ7Z591 1439 aa20.23■□□□□ 0.83
AP004608.1-203ENST00000528482 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
AP004608.1-203ENST00000528482 IPO9Q96P70 1041 aaKnown RBP20.21■□□□□ 0.83
AP004608.1-203ENST00000528482 FOXD1Q16676 465 aa20.21■□□□□ 0.83
AP004608.1-203ENST00000528482 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
AP004608.1-203ENST00000528482 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
AP004608.1-203ENST00000528482 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
AP004608.1-203ENST00000528482 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
AP004608.1-203ENST00000528482 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
AP004608.1-203ENST00000528482 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
AP004608.1-203ENST00000528482 KIF7Q2M1P5 1343 aa20.17■□□□□ 0.82
AP004608.1-203ENST00000528482 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
AP004608.1-203ENST00000528482 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
AP004608.1-203ENST00000528482 HECW1Q76N89 1606 aa20.17■□□□□ 0.82
AP004608.1-203ENST00000528482 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
AP004608.1-203ENST00000528482 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
AP004608.1-203ENST00000528482 NBPF8Q3BBV2 869 aa20.16■□□□□ 0.82
AP004608.1-203ENST00000528482 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
AP004608.1-203ENST00000528482 KDM6BO15054 1643 aa20.14■□□□□ 0.81
AP004608.1-203ENST00000528482 SENP3-EIF4A1A0A087X0R7 540 aa20.13■□□□□ 0.81
AP004608.1-203ENST00000528482 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
AP004608.1-203ENST00000528482 EHBP1L1Q8N3D4 1523 aa20.11■□□□□ 0.81
AP004608.1-203ENST00000528482 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
AP004608.1-203ENST00000528482 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms