RNA–Protein interactions for RNA: ENST00000528482.6

AP004608.1-203, humanhuman

TSL 5 BASIC

Gene AP004608.1, Length 3,679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-203ENST00000528482 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
AP004608.1-203ENST00000528482 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
AP004608.1-203ENST00000528482 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
AP004608.1-203ENST00000528482 HRCP23327 699 aa25.06■■□□□ 1.6
AP004608.1-203ENST00000528482 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
AP004608.1-203ENST00000528482 PCGF6Q9BYE7 350 aa24.7■■□□□ 1.54
AP004608.1-203ENST00000528482 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
AP004608.1-203ENST00000528482 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
AP004608.1-203ENST00000528482 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
AP004608.1-203ENST00000528482 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
AP004608.1-203ENST00000528482 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
AP004608.1-203ENST00000528482 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
AP004608.1-203ENST00000528482 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
AP004608.1-203ENST00000528482 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
AP004608.1-203ENST00000528482 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
AP004608.1-203ENST00000528482 ZEB1P37275 1124 aaPredicted RBP23.66■■□□□ 1.38
AP004608.1-203ENST00000528482 SCAF1Q9H7N4 1312 aaKnown RBP23.57■■□□□ 1.36
AP004608.1-203ENST00000528482 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
AP004608.1-203ENST00000528482 FAM9AQ8IZU1 332 aaPredicted RBP23.28■■□□□ 1.32
AP004608.1-203ENST00000528482 ABCC9O60706 1549 aa23.22■■□□□ 1.31
AP004608.1-203ENST00000528482 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
AP004608.1-203ENST00000528482 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
AP004608.1-203ENST00000528482 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
AP004608.1-203ENST00000528482 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
AP004608.1-203ENST00000528482 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
AP004608.1-203ENST00000528482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
AP004608.1-203ENST00000528482 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
AP004608.1-203ENST00000528482 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
AP004608.1-203ENST00000528482 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
AP004608.1-203ENST00000528482 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
AP004608.1-203ENST00000528482 CENPBP07199 599 aaPredicted RBP22.83■■□□□ 1.24
AP004608.1-203ENST00000528482 MYT1Q01538 1121 aa22.75■■□□□ 1.23
AP004608.1-203ENST00000528482 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
AP004608.1-203ENST00000528482 CECR2Q9BXF3 1484 aa22.55■■□□□ 1.2
AP004608.1-203ENST00000528482 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
AP004608.1-203ENST00000528482 YTHDC1Q96MU7 727 aaKnown RBP22.45■■□□□ 1.18
AP004608.1-203ENST00000528482 ZNF316A6NFI3 1004 aaPredicted RBP22.44■■□□□ 1.18
AP004608.1-203ENST00000528482 WIZO95785 1651 aa22.42■■□□□ 1.18
AP004608.1-203ENST00000528482 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
AP004608.1-203ENST00000528482 CEP162Q5TB80 1403 aa22.33■■□□□ 1.17
AP004608.1-203ENST00000528482 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
AP004608.1-203ENST00000528482 MIER1Q8N108 512 aa22.27■■□□□ 1.16
AP004608.1-203ENST00000528482 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
AP004608.1-203ENST00000528482 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
AP004608.1-203ENST00000528482 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
AP004608.1-203ENST00000528482 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
AP004608.1-203ENST00000528482 SOGA1O94964 1423 aa22.15■■□□□ 1.14
AP004608.1-203ENST00000528482 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
AP004608.1-203ENST00000528482 NACADO15069 1562 aa22.13■■□□□ 1.13
AP004608.1-203ENST00000528482 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
AP004608.1-203ENST00000528482 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
AP004608.1-203ENST00000528482 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
AP004608.1-203ENST00000528482 EEA1Q15075 1411 aa21.98■■□□□ 1.11
AP004608.1-203ENST00000528482 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
AP004608.1-203ENST00000528482 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
AP004608.1-203ENST00000528482 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
AP004608.1-203ENST00000528482 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.09
AP004608.1-203ENST00000528482 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
AP004608.1-203ENST00000528482 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
AP004608.1-203ENST00000528482 CLIP1P30622 1438 aa21.78■■□□□ 1.08
AP004608.1-203ENST00000528482 APLP2Q06481 763 aa21.77■■□□□ 1.08
AP004608.1-203ENST00000528482 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
AP004608.1-203ENST00000528482 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
AP004608.1-203ENST00000528482 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
AP004608.1-203ENST00000528482 TSHZ2Q9NRE2 1034 aa21.67■■□□□ 1.06
AP004608.1-203ENST00000528482 KIF21BO75037 1637 aa21.65■■□□□ 1.06
AP004608.1-203ENST00000528482 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
AP004608.1-203ENST00000528482 ANP32EQ9BTT0 268 aa21.59■■□□□ 1.05
AP004608.1-203ENST00000528482 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
AP004608.1-203ENST00000528482 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
AP004608.1-203ENST00000528482 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
AP004608.1-203ENST00000528482 KCNH8Q96L42 1107 aa21.45■■□□□ 1.02
AP004608.1-203ENST00000528482 BCANQ96GW7 911 aa21.43■■□□□ 1.02
AP004608.1-203ENST00000528482 KANK4Q5T7N3 995 aaPredicted RBP21.41■■□□□ 1.02
AP004608.1-203ENST00000528482 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.01
AP004608.1-203ENST00000528482 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
AP004608.1-203ENST00000528482 FKBP8Q14318 412 aa21.33■■□□□ 1.01
AP004608.1-203ENST00000528482 ARAP1Q96P48 1450 aa21.3■■□□□ 1
AP004608.1-203ENST00000528482 ITGAEP38570 1179 aa21.3■■□□□ 1
AP004608.1-203ENST00000528482 RRBP1Q9P2E9 1410 aaKnown RBP21.29■■□□□ 1
AP004608.1-203ENST00000528482 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
AP004608.1-203ENST00000528482 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
AP004608.1-203ENST00000528482 CUX2O14529 1486 aa21.24■□□□□ 0.99
AP004608.1-203ENST00000528482 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
AP004608.1-203ENST00000528482 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
AP004608.1-203ENST00000528482 RBM19Q9Y4C8 960 aaKnown RBP21.19■□□□□ 0.98
AP004608.1-203ENST00000528482 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
AP004608.1-203ENST00000528482 PRXQ9BXM0 1461 aa21.18■□□□□ 0.98
AP004608.1-203ENST00000528482 NEFLP07196 543 aa21.17■□□□□ 0.98
AP004608.1-203ENST00000528482 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
AP004608.1-203ENST00000528482 RAB3GAP2Q9H2M9 1393 aa21.16■□□□□ 0.98
AP004608.1-203ENST00000528482 MAPKBP1O60336 1514 aa21.14■□□□□ 0.97
AP004608.1-203ENST00000528482 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
AP004608.1-203ENST00000528482 TRIM52Q96A61 297 aa21.1■□□□□ 0.97
AP004608.1-203ENST00000528482 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
AP004608.1-203ENST00000528482 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
AP004608.1-203ENST00000528482 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
AP004608.1-203ENST00000528482 PPP1R15AO75807 674 aaPredicted RBP21.06■□□□□ 0.96
AP004608.1-203ENST00000528482 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
AP004608.1-203ENST00000528482 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms