RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 KIAA0586Q9BVV6 1533 aa21.89■■□□□ 1.09
CNKSR1-211ENST00000528001 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
CNKSR1-211ENST00000528001 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
CNKSR1-211ENST00000528001 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
CNKSR1-211ENST00000528001 ARAP1Q96P48 1450 aa21.75■■□□□ 1.07
CNKSR1-211ENST00000528001 IQGAP2Q13576 1575 aa21.74■■□□□ 1.07
CNKSR1-211ENST00000528001 KIF21BO75037 1637 aa21.72■■□□□ 1.07
CNKSR1-211ENST00000528001 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
CNKSR1-211ENST00000528001 CTTNBP2Q8WZ74 1663 aa21.68■■□□□ 1.06
CNKSR1-211ENST00000528001 ERCC6L2Q5T890 1561 aa21.67■■□□□ 1.06
CNKSR1-211ENST00000528001 UGGT2Q9NYU1 1516 aa21.67■■□□□ 1.06
CNKSR1-211ENST00000528001 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
CNKSR1-211ENST00000528001 CYB5RLQ6IPT4 315 aa21.63■■□□□ 1.05
CNKSR1-211ENST00000528001 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
CNKSR1-211ENST00000528001 DISP1Q96F81 1524 aa21.58■■□□□ 1.04
CNKSR1-211ENST00000528001 GOLGA3Q08378 1498 aa21.58■■□□□ 1.04
CNKSR1-211ENST00000528001 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
CNKSR1-211ENST00000528001 KIAA0556O60303 1618 aa21.53■■□□□ 1.04
CNKSR1-211ENST00000528001 PTPRGP23470 1445 aa21.49■■□□□ 1.03
CNKSR1-211ENST00000528001 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
CNKSR1-211ENST00000528001 EFCAB5A4FU69 1503 aa21.42■■□□□ 1.02
CNKSR1-211ENST00000528001 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
CNKSR1-211ENST00000528001 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
CNKSR1-211ENST00000528001 ADCY10Q96PN6 1610 aa21.38■■□□□ 1.01
CNKSR1-211ENST00000528001 UACAQ9BZF9 1416 aa21.38■■□□□ 1.01
CNKSR1-211ENST00000528001 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
CNKSR1-211ENST00000528001 MAPKBP1O60336 1514 aa21.31■■□□□ 1
CNKSR1-211ENST00000528001 ABCA8O94911 1581 aa21.31■■□□□ 1
CNKSR1-211ENST00000528001 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
CNKSR1-211ENST00000528001 KDM5BQ9UGL1 1544 aa21.29■■□□□ 1
CNKSR1-211ENST00000528001 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
CNKSR1-211ENST00000528001 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
CNKSR1-211ENST00000528001 FHOD3Q2V2M9 1422 aa21.23■□□□□ 0.99
CNKSR1-211ENST00000528001 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
CNKSR1-211ENST00000528001 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
CNKSR1-211ENST00000528001 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
CNKSR1-211ENST00000528001 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
CNKSR1-211ENST00000528001 RAPGEF6Q8TEU7 1601 aa21.18■□□□□ 0.98
CNKSR1-211ENST00000528001 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
CNKSR1-211ENST00000528001 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
CNKSR1-211ENST00000528001 ABCC10Q5T3U5 1492 aa21.16■□□□□ 0.98
CNKSR1-211ENST00000528001 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
CNKSR1-211ENST00000528001 CLIP1P30622 1438 aa21.15■□□□□ 0.98
CNKSR1-211ENST00000528001 ASXL2Q76L83 1435 aa21.13■□□□□ 0.97
CNKSR1-211ENST00000528001 NUP153P49790 1475 aaKnown RBP21.12■□□□□ 0.97
CNKSR1-211ENST00000528001 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
CNKSR1-211ENST00000528001 ATP10BO94823 1461 aa21.1■□□□□ 0.97
CNKSR1-211ENST00000528001 CEP162Q5TB80 1403 aa21.09■□□□□ 0.97
CNKSR1-211ENST00000528001 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
CNKSR1-211ENST00000528001 GLI2P10070 1586 aa21.07■□□□□ 0.96
CNKSR1-211ENST00000528001 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
CNKSR1-211ENST00000528001 HECW1Q76N89 1606 aa21.06■□□□□ 0.96
CNKSR1-211ENST00000528001 LOC105371045A0A1W2PR82 267 aa21.04■□□□□ 0.96
CNKSR1-211ENST00000528001 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
CNKSR1-211ENST00000528001 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
CNKSR1-211ENST00000528001 FAM69CQ0P6D2 419 aa21.02■□□□□ 0.96
CNKSR1-211ENST00000528001 FYCO1Q9BQS8 1478 aa21■□□□□ 0.95
CNKSR1-211ENST00000528001 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
CNKSR1-211ENST00000528001 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
CNKSR1-211ENST00000528001 MAP3K4Q9Y6R4 1608 aa20.93■□□□□ 0.94
CNKSR1-211ENST00000528001 PLEKHD1A6NEE1 506 aa20.93■□□□□ 0.94
CNKSR1-211ENST00000528001 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
CNKSR1-211ENST00000528001 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
CNKSR1-211ENST00000528001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
CNKSR1-211ENST00000528001 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
CNKSR1-211ENST00000528001 CFAP43Q8NDM7 1665 aa20.91■□□□□ 0.94
CNKSR1-211ENST00000528001 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
CNKSR1-211ENST00000528001 ABCA9Q8IUA7 1624 aa20.88■□□□□ 0.93
CNKSR1-211ENST00000528001 MAGI3Q5TCQ9 1506 aa20.87■□□□□ 0.93
CNKSR1-211ENST00000528001 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
CNKSR1-211ENST00000528001 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
CNKSR1-211ENST00000528001 TEX14Q8IWB6 1497 aa20.86■□□□□ 0.93
CNKSR1-211ENST00000528001 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
CNKSR1-211ENST00000528001 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
CNKSR1-211ENST00000528001 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
CNKSR1-211ENST00000528001 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
CNKSR1-211ENST00000528001 PPRC1Q5VV67 1664 aaKnown RBP20.83■□□□□ 0.93
CNKSR1-211ENST00000528001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.92
CNKSR1-211ENST00000528001 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
CNKSR1-211ENST00000528001 KIF14Q15058 1648 aa20.77■□□□□ 0.92
CNKSR1-211ENST00000528001 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
CNKSR1-211ENST00000528001 MAP3K1Q13233 1512 aa20.76■□□□□ 0.91
CNKSR1-211ENST00000528001 ARAP3Q8WWN8 1544 aa20.74■□□□□ 0.91
CNKSR1-211ENST00000528001 NEO1Q92859 1461 aa20.74■□□□□ 0.91
CNKSR1-211ENST00000528001 TTC37Q6PGP7 1564 aa20.72■□□□□ 0.91
CNKSR1-211ENST00000528001 KDM6BO15054 1643 aa20.71■□□□□ 0.91
CNKSR1-211ENST00000528001 PLCH2O75038 1416 aa20.7■□□□□ 0.9
CNKSR1-211ENST00000528001 TIAM1Q13009 1591 aa20.7■□□□□ 0.9
CNKSR1-211ENST00000528001 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
CNKSR1-211ENST00000528001 CFAP74Q9C0B2 1584 aa20.69■□□□□ 0.9
CNKSR1-211ENST00000528001 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
CNKSR1-211ENST00000528001 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
CNKSR1-211ENST00000528001 FANCAO15360 1455 aa20.64■□□□□ 0.89
CNKSR1-211ENST00000528001 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
CNKSR1-211ENST00000528001 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
CNKSR1-211ENST00000528001 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
CNKSR1-211ENST00000528001 EFCAB2Q5VUJ9 269 aa20.6■□□□□ 0.89
CNKSR1-211ENST00000528001 AKNAQ7Z591 1439 aa20.6■□□□□ 0.89
CNKSR1-211ENST00000528001 GPATCH8Q9UKJ3 1502 aaKnown RBP20.57■□□□□ 0.88
CNKSR1-211ENST00000528001 SUPT6HQ7KZ85 1726 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms