RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
CNKSR1-211ENST00000528001 CCDC180Q9P1Z9 1646 aa28.13■■■□□ 2.09
CNKSR1-211ENST00000528001 ABCC9O60706 1549 aa27.21■■□□□ 1.95
CNKSR1-211ENST00000528001 NACADO15069 1562 aa26.41■■□□□ 1.82
CNKSR1-211ENST00000528001 MYO15BQ96JP2 1530 aa26.41■■□□□ 1.82
CNKSR1-211ENST00000528001 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
CNKSR1-211ENST00000528001 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
CNKSR1-211ENST00000528001 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
CNKSR1-211ENST00000528001 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
CNKSR1-211ENST00000528001 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
CNKSR1-211ENST00000528001 BICRAQ9NZM4 1560 aa25.54■■□□□ 1.68
CNKSR1-211ENST00000528001 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
CNKSR1-211ENST00000528001 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
CNKSR1-211ENST00000528001 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
CNKSR1-211ENST00000528001 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
CNKSR1-211ENST00000528001 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
CNKSR1-211ENST00000528001 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
CNKSR1-211ENST00000528001 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
CNKSR1-211ENST00000528001 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
CNKSR1-211ENST00000528001 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
CNKSR1-211ENST00000528001 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
CNKSR1-211ENST00000528001 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
CNKSR1-211ENST00000528001 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
CNKSR1-211ENST00000528001 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
CNKSR1-211ENST00000528001 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
CNKSR1-211ENST00000528001 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
CNKSR1-211ENST00000528001 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
CNKSR1-211ENST00000528001 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
CNKSR1-211ENST00000528001 WIZO95785 1651 aa24.04■■□□□ 1.44
CNKSR1-211ENST00000528001 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
CNKSR1-211ENST00000528001 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
CNKSR1-211ENST00000528001 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
CNKSR1-211ENST00000528001 NESP48681 1621 aa23.59■■□□□ 1.37
CNKSR1-211ENST00000528001 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
CNKSR1-211ENST00000528001 CFTRP13569 1480 aa23.54■■□□□ 1.36
CNKSR1-211ENST00000528001 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
CNKSR1-211ENST00000528001 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
CNKSR1-211ENST00000528001 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
CNKSR1-211ENST00000528001 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
CNKSR1-211ENST00000528001 PRDM2Q13029 1718 aa23.33■■□□□ 1.33
CNKSR1-211ENST00000528001 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
CNKSR1-211ENST00000528001 CUX2O14529 1486 aa23.31■■□□□ 1.32
CNKSR1-211ENST00000528001 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
CNKSR1-211ENST00000528001 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
CNKSR1-211ENST00000528001 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
CNKSR1-211ENST00000528001 WDR62O43379 1518 aa23.19■■□□□ 1.3
CNKSR1-211ENST00000528001 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
CNKSR1-211ENST00000528001 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
CNKSR1-211ENST00000528001 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
CNKSR1-211ENST00000528001 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
CNKSR1-211ENST00000528001 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
CNKSR1-211ENST00000528001 CUX1P39880 1505 aa22.82■■□□□ 1.24
CNKSR1-211ENST00000528001 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
CNKSR1-211ENST00000528001 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
CNKSR1-211ENST00000528001 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
CNKSR1-211ENST00000528001 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
CNKSR1-211ENST00000528001 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
CNKSR1-211ENST00000528001 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
CNKSR1-211ENST00000528001 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
CNKSR1-211ENST00000528001 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
CNKSR1-211ENST00000528001 SOGA1O94964 1423 aa22.67■■□□□ 1.22
CNKSR1-211ENST00000528001 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
CNKSR1-211ENST00000528001 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
CNKSR1-211ENST00000528001 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
CNKSR1-211ENST00000528001 EIF4G3O43432 1585 aaKnown RBP22.58■■□□□ 1.2
CNKSR1-211ENST00000528001 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
CNKSR1-211ENST00000528001 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
CNKSR1-211ENST00000528001 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
CNKSR1-211ENST00000528001 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
CNKSR1-211ENST00000528001 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
CNKSR1-211ENST00000528001 GAPVD1Q14C86 1478 aa22.44■■□□□ 1.18
CNKSR1-211ENST00000528001 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
CNKSR1-211ENST00000528001 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
CNKSR1-211ENST00000528001 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
CNKSR1-211ENST00000528001 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
CNKSR1-211ENST00000528001 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
CNKSR1-211ENST00000528001 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
CNKSR1-211ENST00000528001 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
CNKSR1-211ENST00000528001 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
CNKSR1-211ENST00000528001 CHD1O14646 1710 aa22.22■■□□□ 1.15
CNKSR1-211ENST00000528001 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
CNKSR1-211ENST00000528001 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
CNKSR1-211ENST00000528001 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
CNKSR1-211ENST00000528001 IGF1RP08069 1367 aa22.16■■□□□ 1.14
CNKSR1-211ENST00000528001 FBLN2P98095 1184 aa22.14■■□□□ 1.13
CNKSR1-211ENST00000528001 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
CNKSR1-211ENST00000528001 CUL7Q14999 1698 aa22.14■■□□□ 1.13
CNKSR1-211ENST00000528001 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
CNKSR1-211ENST00000528001 NUP160Q12769 1436 aa22.06■■□□□ 1.12
CNKSR1-211ENST00000528001 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
CNKSR1-211ENST00000528001 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
CNKSR1-211ENST00000528001 EEA1Q15075 1411 aa22.01■■□□□ 1.11
CNKSR1-211ENST00000528001 RUSC2Q8N2Y8 1516 aa22■■□□□ 1.11
CNKSR1-211ENST00000528001 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
CNKSR1-211ENST00000528001 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
CNKSR1-211ENST00000528001 RAPGEF2Q9Y4G8 1499 aa21.93■■□□□ 1.1
CNKSR1-211ENST00000528001 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
CNKSR1-211ENST00000528001 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
CNKSR1-211ENST00000528001 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.09
CNKSR1-211ENST00000528001 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms