RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
CTSB-214ENST00000527243 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
CTSB-214ENST00000527243 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
CTSB-214ENST00000527243 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
CTSB-214ENST00000527243 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
CTSB-214ENST00000527243 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
CTSB-214ENST00000527243 EEA1Q15075 1411 aa18.9■□□□□ 0.62
CTSB-214ENST00000527243 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
CTSB-214ENST00000527243 IQGAP2Q13576 1575 aa18.83■□□□□ 0.6
CTSB-214ENST00000527243 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
CTSB-214ENST00000527243 DISP1Q96F81 1524 aa18.76■□□□□ 0.59
CTSB-214ENST00000527243 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
CTSB-214ENST00000527243 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
CTSB-214ENST00000527243 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
CTSB-214ENST00000527243 CTTNBP2Q8WZ74 1663 aa18.7■□□□□ 0.58
CTSB-214ENST00000527243 PTPRGP23470 1445 aa18.7■□□□□ 0.58
CTSB-214ENST00000527243 KIF21BO75037 1637 aa18.68■□□□□ 0.58
CTSB-214ENST00000527243 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
CTSB-214ENST00000527243 ADCY10Q96PN6 1610 aa18.64■□□□□ 0.57
CTSB-214ENST00000527243 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
CTSB-214ENST00000527243 UHRF1BP1LA0JNW5 1464 aa18.59■□□□□ 0.57
CTSB-214ENST00000527243 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
CTSB-214ENST00000527243 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
CTSB-214ENST00000527243 SAMD9Q5K651 1589 aa18.55■□□□□ 0.56
CTSB-214ENST00000527243 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
CTSB-214ENST00000527243 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
CTSB-214ENST00000527243 ABCC2Q92887 1545 aa18.55■□□□□ 0.56
CTSB-214ENST00000527243 NPM1P06748 294 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTSB-214ENST00000527243 PLB1Q6P1J6 1458 aa18.51■□□□□ 0.55
CTSB-214ENST00000527243 KDM5BQ9UGL1 1544 aa18.5■□□□□ 0.55
CTSB-214ENST00000527243 ABCA8O94911 1581 aa18.5■□□□□ 0.55
CTSB-214ENST00000527243 ABCC10Q5T3U5 1492 aa18.47■□□□□ 0.55
CTSB-214ENST00000527243 P3H3Q8IVL6 736 aa18.47■□□□□ 0.55
CTSB-214ENST00000527243 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
CTSB-214ENST00000527243 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
CTSB-214ENST00000527243 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
CTSB-214ENST00000527243 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
CTSB-214ENST00000527243 ASXL2Q76L83 1435 aa18.42■□□□□ 0.54
CTSB-214ENST00000527243 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
CTSB-214ENST00000527243 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
CTSB-214ENST00000527243 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
CTSB-214ENST00000527243 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.53
CTSB-214ENST00000527243 FAM69CQ0P6D2 419 aa18.39■□□□□ 0.53
CTSB-214ENST00000527243 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
CTSB-214ENST00000527243 ATP10BO94823 1461 aa18.35■□□□□ 0.53
CTSB-214ENST00000527243 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
CTSB-214ENST00000527243 GLI2P10070 1586 aa18.34■□□□□ 0.53
CTSB-214ENST00000527243 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.53
CTSB-214ENST00000527243 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
CTSB-214ENST00000527243 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
CTSB-214ENST00000527243 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
CTSB-214ENST00000527243 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
CTSB-214ENST00000527243 CLIP1P30622 1438 aa18.23■□□□□ 0.51
CTSB-214ENST00000527243 MAP3K4Q9Y6R4 1608 aa18.21■□□□□ 0.51
CTSB-214ENST00000527243 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
CTSB-214ENST00000527243 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
CTSB-214ENST00000527243 CDK13Q14004 1512 aaKnown RBP18.17■□□□□ 0.5
CTSB-214ENST00000527243 LOC105371045A0A1W2PR82 267 aa18.16■□□□□ 0.5
CTSB-214ENST00000527243 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
CTSB-214ENST00000527243 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
CTSB-214ENST00000527243 MAGI3Q5TCQ9 1506 aa18.15■□□□□ 0.5
CTSB-214ENST00000527243 TSPOAP1O95153 1857 aa18.15■□□□□ 0.5
CTSB-214ENST00000527243 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
CTSB-214ENST00000527243 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
CTSB-214ENST00000527243 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
CTSB-214ENST00000527243 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
CTSB-214ENST00000527243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
CTSB-214ENST00000527243 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
CTSB-214ENST00000527243 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
CTSB-214ENST00000527243 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
CTSB-214ENST00000527243 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
CTSB-214ENST00000527243 COL17A1Q9UMD9 1497 aaPredicted RBP18.1■□□□□ 0.49
CTSB-214ENST00000527243 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
CTSB-214ENST00000527243 KDM6BO15054 1643 aa18.08■□□□□ 0.48
CTSB-214ENST00000527243 ATP1B4Q9UN42 357 aaPredicted RBP18.07■□□□□ 0.48
CTSB-214ENST00000527243 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
CTSB-214ENST00000527243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.05■□□□□ 0.48
CTSB-214ENST00000527243 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
CTSB-214ENST00000527243 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
CTSB-214ENST00000527243 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
CTSB-214ENST00000527243 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
CTSB-214ENST00000527243 TTC37Q6PGP7 1564 aa18■□□□□ 0.47
CTSB-214ENST00000527243 NEO1Q92859 1461 aa18■□□□□ 0.47
CTSB-214ENST00000527243 ARAP3Q8WWN8 1544 aa17.99■□□□□ 0.47
CTSB-214ENST00000527243 KIF14Q15058 1648 aa17.96■□□□□ 0.47
CTSB-214ENST00000527243 PLCH2O75038 1416 aa17.96■□□□□ 0.47
CTSB-214ENST00000527243 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
CTSB-214ENST00000527243 FANCAO15360 1455 aa17.93■□□□□ 0.46
CTSB-214ENST00000527243 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
CTSB-214ENST00000527243 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
CTSB-214ENST00000527243 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
CTSB-214ENST00000527243 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
CTSB-214ENST00000527243 DENND4BO75064 1496 aaPredicted RBP17.85■□□□□ 0.45
CTSB-214ENST00000527243 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
CTSB-214ENST00000527243 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
CTSB-214ENST00000527243 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
CTSB-214ENST00000527243 EHBP1L1Q8N3D4 1523 aa17.82■□□□□ 0.44
CTSB-214ENST00000527243 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
CTSB-214ENST00000527243 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
CTSB-214ENST00000527243 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms