RNA–Protein interactions for RNA: ENST00000526469.5

GSDMD-207, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 1,643 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-207ENST00000526469 RANGAP1P46060 587 aaPredicted RBP36.68■■■■□ 3.46
GSDMD-207ENST00000526469 IQGAP2Q13576 1575 aa36.64■■■■□ 3.46
GSDMD-207ENST00000526469 FBLN2P98095 1184 aa36.63■■■■□ 3.45
GSDMD-207ENST00000526469 EFCAB5A4FU69 1503 aa36.62■■■■□ 3.45
GSDMD-207ENST00000526469 ARHGAP35Q9NRY4 1499 aa36.62■■■■□ 3.45
GSDMD-207ENST00000526469 CHD1O14646 1710 aa36.62■■■■□ 3.45
GSDMD-207ENST00000526469 KIAA0586Q9BVV6 1533 aa36.6■■■■□ 3.45
GSDMD-207ENST00000526469 CEP170Q5SW79 1584 aa36.59■■■■□ 3.45
GSDMD-207ENST00000526469 NUP160Q12769 1436 aa36.58■■■■□ 3.45
GSDMD-207ENST00000526469 ARAP1Q96P48 1450 aa36.55■■■■□ 3.44
GSDMD-207ENST00000526469 VPS8Q8N3P4 1428 aa36.52■■■■□ 3.44
GSDMD-207ENST00000526469 SAMD9Q5K651 1589 aa36.5■■■■□ 3.43
GSDMD-207ENST00000526469 UGGT2Q9NYU1 1516 aa36.46■■■■□ 3.43
GSDMD-207ENST00000526469 FHOD3Q2V2M9 1422 aa36.32■■■■□ 3.41
GSDMD-207ENST00000526469 DNAJC5Q9H3Z4 198 aa36.3■■■■□ 3.4
GSDMD-207ENST00000526469 P3H3Q8IVL6 736 aa36.29■■■■□ 3.4
GSDMD-207ENST00000526469 KIAA0556O60303 1618 aa36.27■■■■□ 3.4
GSDMD-207ENST00000526469 FMN1Q68DA7 1419 aa36.25■■■■□ 3.39
GSDMD-207ENST00000526469 DISP1Q96F81 1524 aa36.23■■■■□ 3.39
GSDMD-207ENST00000526469 JPH4Q96JJ6 628 aa36.22■■■■□ 3.39
GSDMD-207ENST00000526469 OSCARQ8IYS5 282 aa36.19■■■■□ 3.38
GSDMD-207ENST00000526469 CLASP1Q7Z460 1538 aa36.18■■■■□ 3.38
GSDMD-207ENST00000526469 CARMIL2Q6F5E8 1435 aa36.18■■■■□ 3.38
GSDMD-207ENST00000526469 SHROOM2Q13796 1616 aa36.17■■■■□ 3.38
GSDMD-207ENST00000526469 APLP2Q06481 763 aa36.16■■■■□ 3.38
GSDMD-207ENST00000526469 PCF11O94913 1555 aaKnown RBP36.15■■■■□ 3.38
GSDMD-207ENST00000526469 FYCO1Q9BQS8 1478 aa36.12■■■■□ 3.37
GSDMD-207ENST00000526469 CASKIN1Q8WXD9 1431 aa36.11■■■■□ 3.37
GSDMD-207ENST00000526469 PRG4Q92954 1404 aaPredicted RBP36.04■■■■□ 3.36
GSDMD-207ENST00000526469 MAP3K1Q13233 1512 aa36.02■■■■□ 3.36
GSDMD-207ENST00000526469 CFAP43Q8NDM7 1665 aa35.96■■■■□ 3.35
GSDMD-207ENST00000526469 HECW1Q76N89 1606 aa35.95■■■■□ 3.35
GSDMD-207ENST00000526469 TIAM1Q13009 1591 aa35.95■■■■□ 3.35
GSDMD-207ENST00000526469 PPARGC1BQ86YN6 1023 aaKnown RBP35.92■■■■□ 3.34
GSDMD-207ENST00000526469 ATP1B4Q9UN42 357 aaPredicted RBP35.9■■■■□ 3.34
GSDMD-207ENST00000526469 RAPGEF6Q8TEU7 1601 aa35.88■■■■□ 3.34
GSDMD-207ENST00000526469 LRRIQ1Q96JM4 1722 aa35.85■■■■□ 3.33
GSDMD-207ENST00000526469 CCDC18Q5T9S5 1454 aa35.84■■■■□ 3.33
GSDMD-207ENST00000526469 TTBK1Q5TCY1 1321 aaPredicted RBP35.81■■■■□ 3.32
GSDMD-207ENST00000526469 TRIM26Q12899 539 aaPredicted RBP35.81■■■■□ 3.32
GSDMD-207ENST00000526469 ERCC6L2Q5T890 1561 aa35.8■■■■□ 3.32
GSDMD-207ENST00000526469 PTPRGP23470 1445 aa35.8■■■■□ 3.32
GSDMD-207ENST00000526469 ABCA8O94911 1581 aa35.76■■■■□ 3.32
GSDMD-207ENST00000526469 LRRC9Q6ZRR7 1453 aa35.76■■■■□ 3.31
GSDMD-207ENST00000526469 EPRSP07814 1512 aaKnown RBP35.74■■■■□ 3.31
GSDMD-207ENST00000526469 PLB1Q6P1J6 1458 aa35.74■■■■□ 3.31
GSDMD-207ENST00000526469 KANK4Q5T7N3 995 aaPredicted RBP35.73■■■■□ 3.31
GSDMD-207ENST00000526469 NUP153P49790 1475 aaKnown RBP35.72■■■■□ 3.31
GSDMD-207ENST00000526469 ARHGEF11O15085 1522 aa35.68■■■■□ 3.3
GSDMD-207ENST00000526469 RIMBP3CA6NJZ7 1639 aa35.67■■■■□ 3.3
GSDMD-207ENST00000526469 RIMBP3BA6NNM3 1639 aa35.67■■■■□ 3.3
GSDMD-207ENST00000526469 RIMBP3Q9UFD9 1639 aa35.67■■■■□ 3.3
GSDMD-207ENST00000526469 CDK13Q14004 1512 aaKnown RBP35.63■■■■□ 3.29
GSDMD-207ENST00000526469 EHBP1L1Q8N3D4 1523 aa35.61■■■■□ 3.29
GSDMD-207ENST00000526469 UACAQ9BZF9 1416 aa35.61■■■■□ 3.29
GSDMD-207ENST00000526469 MTUS2Q5JR59 1369 aa35.59■■■■□ 3.29
GSDMD-207ENST00000526469 PCGF6Q9BYE7 350 aa35.59■■■■□ 3.29
GSDMD-207ENST00000526469 ABCC2Q92887 1545 aa35.54■■■■□ 3.28
GSDMD-207ENST00000526469 SUPT6HQ7KZ85 1726 aaKnown RBP35.51■■■■□ 3.27
GSDMD-207ENST00000526469 CDK11AQ9UQ88 783 aaPredicted RBP35.5■■■■□ 3.27
GSDMD-207ENST00000526469 UHRF1BP1LA0JNW5 1464 aa35.49■■■■□ 3.27
GSDMD-207ENST00000526469 MAGI3Q5TCQ9 1506 aa35.49■■■■□ 3.27
GSDMD-207ENST00000526469 ARID3CA6NKF2 412 aa35.48■■■■□ 3.27
GSDMD-207ENST00000526469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.46■■■■□ 3.27
GSDMD-207ENST00000526469 HNRNPUL2Q1KMD3 747 aaKnown RBP35.46■■■■□ 3.27
GSDMD-207ENST00000526469 ATP10BO94823 1461 aa35.45■■■■□ 3.27
GSDMD-207ENST00000526469 NCOA2Q15596 1464 aa35.38■■■■□ 3.25
GSDMD-207ENST00000526469 TROQ12816 1431 aaPredicted RBP35.37■■■■□ 3.25
GSDMD-207ENST00000526469 RRBP1Q9P2E9 1410 aaKnown RBP35.36■■■■□ 3.25
GSDMD-207ENST00000526469 PHLDB1Q86UU1 1377 aa35.34■■■■□ 3.25
GSDMD-207ENST00000526469 ADCY10Q96PN6 1610 aa35.33■■■■□ 3.25
GSDMD-207ENST00000526469 KDM5BQ9UGL1 1544 aa35.31■■■■□ 3.24
GSDMD-207ENST00000526469 ZCCHC11Q5TAX3 1644 aaKnown RBP35.31■■■■□ 3.24
GSDMD-207ENST00000526469 PLEKHD1A6NEE1 506 aa35.3■■■■□ 3.24
GSDMD-207ENST00000526469 CYB5RLQ6IPT4 315 aa35.3■■■■□ 3.24
GSDMD-207ENST00000526469 CCNB3Q8WWL7 1395 aa35.26■■■■□ 3.24
GSDMD-207ENST00000526469 KIF14Q15058 1648 aa35.24■■■■□ 3.23
GSDMD-207ENST00000526469 MYOM3Q5VTT5 1437 aa35.23■■■■□ 3.23
GSDMD-207ENST00000526469 FGD6Q6ZV73 1430 aa35.19■■■■□ 3.22
GSDMD-207ENST00000526469 ITSN2Q9NZM3 1697 aa35.14■■■■□ 3.22
GSDMD-207ENST00000526469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.12■■■■□ 3.21
GSDMD-207ENST00000526469 MIA2Q96PC5 1412 aa35.1■■■■□ 3.21
GSDMD-207ENST00000526469 PTPN23Q9H3S7 1636 aa35.07■■■■□ 3.2
GSDMD-207ENST00000526469 ABCC10Q5T3U5 1492 aa35.06■■■■□ 3.2
GSDMD-207ENST00000526469 NPM1P06748 294 aaKnown RBP eCLIP35.04■■■■□ 3.2
GSDMD-207ENST00000526469 FAM50AQ14320 339 aaKnown RBP35.02■■■■□ 3.2
GSDMD-207ENST00000526469 CDC42BPAQ5VT25 1732 aa35.01■■■■□ 3.2
GSDMD-207ENST00000526469 TCOF1Q13428 1488 aaKnown RBP35.01■■■■□ 3.2
GSDMD-207ENST00000526469 GPATCH8Q9UKJ3 1502 aaKnown RBP35■■■■□ 3.19
GSDMD-207ENST00000526469 WDR7Q9Y4E6 1490 aa35■■■■□ 3.19
GSDMD-207ENST00000526469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.94■■■■□ 3.18
GSDMD-207ENST00000526469 ASXL2Q76L83 1435 aa34.93■■■■□ 3.18
GSDMD-207ENST00000526469 TTC37Q6PGP7 1564 aa34.92■■■■□ 3.18
GSDMD-207ENST00000526469 PREX2Q70Z35 1606 aa34.92■■■■□ 3.18
GSDMD-207ENST00000526469 MYO5CQ9NQX4 1742 aa34.91■■■■□ 3.18
GSDMD-207ENST00000526469 CFDP1Q9UEE9 299 aaPredicted RBP34.89■■■■□ 3.18
GSDMD-207ENST00000526469 KCNH8Q96L42 1107 aa34.88■■■■□ 3.17
GSDMD-207ENST00000526469 CDC42BPBQ9Y5S2 1711 aa34.85■■■■□ 3.17
GSDMD-207ENST00000526469 ITGAEP38570 1179 aa34.84■■■■□ 3.17
GSDMD-207ENST00000526469 CAMSAP2Q08AD1 1489 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms