RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
SSBP3-210ENST00000525990 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
SSBP3-210ENST00000525990 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
SSBP3-210ENST00000525990 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
SSBP3-210ENST00000525990 KIF13AQ9H1H9 1805 aa20.83■□□□□ 0.92
SSBP3-210ENST00000525990 ADCY10Q96PN6 1610 aa20.81■□□□□ 0.92
SSBP3-210ENST00000525990 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
SSBP3-210ENST00000525990 RAPGEF2Q9Y4G8 1499 aa20.72■□□□□ 0.91
SSBP3-210ENST00000525990 CTTNBP2Q8WZ74 1663 aa20.7■□□□□ 0.9
SSBP3-210ENST00000525990 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
SSBP3-210ENST00000525990 DISP1Q96F81 1524 aa20.66■□□□□ 0.9
SSBP3-210ENST00000525990 MAPKBP1O60336 1514 aa20.65■□□□□ 0.9
SSBP3-210ENST00000525990 DIP2BQ9P265 1576 aa20.63■□□□□ 0.89
SSBP3-210ENST00000525990 PTPRGP23470 1445 aa20.62■□□□□ 0.89
SSBP3-210ENST00000525990 UGGT2Q9NYU1 1516 aa20.62■□□□□ 0.89
SSBP3-210ENST00000525990 CARMIL2Q6F5E8 1435 aa20.61■□□□□ 0.89
SSBP3-210ENST00000525990 KIAA0556O60303 1618 aa20.61■□□□□ 0.89
SSBP3-210ENST00000525990 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
SSBP3-210ENST00000525990 ABCC10Q5T3U5 1492 aa20.59■□□□□ 0.89
SSBP3-210ENST00000525990 TSPOAP1O95153 1857 aa20.58■□□□□ 0.88
SSBP3-210ENST00000525990 NPM1P06748 294 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSBP3-210ENST00000525990 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
SSBP3-210ENST00000525990 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
SSBP3-210ENST00000525990 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
SSBP3-210ENST00000525990 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
SSBP3-210ENST00000525990 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
SSBP3-210ENST00000525990 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
SSBP3-210ENST00000525990 ASXL2Q76L83 1435 aa20.45■□□□□ 0.86
SSBP3-210ENST00000525990 PPRC1Q5VV67 1664 aaKnown RBP20.44■□□□□ 0.86
SSBP3-210ENST00000525990 PLB1Q6P1J6 1458 aa20.43■□□□□ 0.86
SSBP3-210ENST00000525990 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
SSBP3-210ENST00000525990 KDM6BO15054 1643 aa20.39■□□□□ 0.86
SSBP3-210ENST00000525990 ABCA8O94911 1581 aa20.39■□□□□ 0.85
SSBP3-210ENST00000525990 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
SSBP3-210ENST00000525990 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
SSBP3-210ENST00000525990 GLI2P10070 1586 aa20.38■□□□□ 0.85
SSBP3-210ENST00000525990 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
SSBP3-210ENST00000525990 MAP3K4Q9Y6R4 1608 aa20.35■□□□□ 0.85
SSBP3-210ENST00000525990 SAMD9Q5K651 1589 aa20.34■□□□□ 0.85
SSBP3-210ENST00000525990 EPRSP07814 1512 aaKnown RBP20.34■□□□□ 0.85
SSBP3-210ENST00000525990 P3H3Q8IVL6 736 aa20.32■□□□□ 0.84
SSBP3-210ENST00000525990 EEA1Q15075 1411 aa20.32■□□□□ 0.84
SSBP3-210ENST00000525990 KIF21BO75037 1637 aa20.28■□□□□ 0.84
SSBP3-210ENST00000525990 WDR7Q9Y4E6 1490 aa20.28■□□□□ 0.84
SSBP3-210ENST00000525990 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-210ENST00000525990 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
SSBP3-210ENST00000525990 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
SSBP3-210ENST00000525990 RAPGEF6Q8TEU7 1601 aa20.23■□□□□ 0.83
SSBP3-210ENST00000525990 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
SSBP3-210ENST00000525990 CFAP43Q8NDM7 1665 aa20.21■□□□□ 0.83
SSBP3-210ENST00000525990 COL17A1Q9UMD9 1497 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-210ENST00000525990 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
SSBP3-210ENST00000525990 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
SSBP3-210ENST00000525990 ATP10BO94823 1461 aa20.18■□□□□ 0.82
SSBP3-210ENST00000525990 KCNH8Q96L42 1107 aa20.15■□□□□ 0.82
SSBP3-210ENST00000525990 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.81
SSBP3-210ENST00000525990 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
SSBP3-210ENST00000525990 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
SSBP3-210ENST00000525990 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
SSBP3-210ENST00000525990 MAGI3Q5TCQ9 1506 aa20.09■□□□□ 0.81
SSBP3-210ENST00000525990 ABCA9Q8IUA7 1624 aa20.09■□□□□ 0.81
SSBP3-210ENST00000525990 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
SSBP3-210ENST00000525990 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.8
SSBP3-210ENST00000525990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-210ENST00000525990 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
SSBP3-210ENST00000525990 CDK13Q14004 1512 aaKnown RBP20.01■□□□□ 0.79
SSBP3-210ENST00000525990 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
SSBP3-210ENST00000525990 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
SSBP3-210ENST00000525990 ADGRL1O94910 1474 aa19.98■□□□□ 0.79
SSBP3-210ENST00000525990 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
SSBP3-210ENST00000525990 ARAP3Q8WWN8 1544 aa19.93■□□□□ 0.78
SSBP3-210ENST00000525990 HECW1Q76N89 1606 aa19.93■□□□□ 0.78
SSBP3-210ENST00000525990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.92■□□□□ 0.782e-8■■■□□ 17.5
SSBP3-210ENST00000525990 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
SSBP3-210ENST00000525990 NEO1Q92859 1461 aa19.87■□□□□ 0.77
SSBP3-210ENST00000525990 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
SSBP3-210ENST00000525990 RICTORQ6R327 1708 aa19.86■□□□□ 0.77
SSBP3-210ENST00000525990 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
SSBP3-210ENST00000525990 KIF14Q15058 1648 aa19.85■□□□□ 0.77
SSBP3-210ENST00000525990 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
SSBP3-210ENST00000525990 PCF11O94913 1555 aaKnown RBP19.85■□□□□ 0.77
SSBP3-210ENST00000525990 RAPGEF3O95398 923 aa19.84■□□□□ 0.77
SSBP3-210ENST00000525990 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.76
SSBP3-210ENST00000525990 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
SSBP3-210ENST00000525990 FANCAO15360 1455 aa19.8■□□□□ 0.76
SSBP3-210ENST00000525990 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
SSBP3-210ENST00000525990 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
SSBP3-210ENST00000525990 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
SSBP3-210ENST00000525990 ARHGEF40Q8TER5 1519 aa19.74■□□□□ 0.75
SSBP3-210ENST00000525990 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
SSBP3-210ENST00000525990 ADAMTSL3P82987 1691 aa19.72■□□□□ 0.75
SSBP3-210ENST00000525990 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
SSBP3-210ENST00000525990 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
SSBP3-210ENST00000525990 PLCH2O75038 1416 aa19.71■□□□□ 0.75
SSBP3-210ENST00000525990 TROQ12816 1431 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-210ENST00000525990 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
SSBP3-210ENST00000525990 CLIP1P30622 1438 aa19.7■□□□□ 0.74
SSBP3-210ENST00000525990 ZMYM4Q5VZL5 1548 aa19.7■□□□□ 0.74
SSBP3-210ENST00000525990 HECW2Q9P2P5 1572 aa19.68■□□□□ 0.74
SSBP3-210ENST00000525990 MADDQ8WXG6 1647 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms