RNA–Protein interactions for RNA: ENST00000525839.6

ARHGEF4-212, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF4, Length 3,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-212ENST00000525839 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF4-212ENST00000525839 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
ARHGEF4-212ENST00000525839 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF4-212ENST00000525839 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
ARHGEF4-212ENST00000525839 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
ARHGEF4-212ENST00000525839 ERICH6BQ5W0A0 696 aa17.28■□□□□ 0.36
ARHGEF4-212ENST00000525839 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
ARHGEF4-212ENST00000525839 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
ARHGEF4-212ENST00000525839 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
ARHGEF4-212ENST00000525839 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
ARHGEF4-212ENST00000525839 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
ARHGEF4-212ENST00000525839 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
ARHGEF4-212ENST00000525839 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
ARHGEF4-212ENST00000525839 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF4-212ENST00000525839 NBR1Q14596 966 aa17.18■□□□□ 0.34
ARHGEF4-212ENST00000525839 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
ARHGEF4-212ENST00000525839 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
ARHGEF4-212ENST00000525839 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF4-212ENST00000525839 MAP3K1Q13233 1512 aa17.14■□□□□ 0.34
ARHGEF4-212ENST00000525839 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
ARHGEF4-212ENST00000525839 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
ARHGEF4-212ENST00000525839 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
ARHGEF4-212ENST00000525839 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
ARHGEF4-212ENST00000525839 LRRC9Q6ZRR7 1453 aa17.11■□□□□ 0.33
ARHGEF4-212ENST00000525839 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
ARHGEF4-212ENST00000525839 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
ARHGEF4-212ENST00000525839 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF4-212ENST00000525839 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
ARHGEF4-212ENST00000525839 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF4-212ENST00000525839 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
ARHGEF4-212ENST00000525839 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
ARHGEF4-212ENST00000525839 CCDC184Q52MB2 194 aa17.01■□□□□ 0.31
ARHGEF4-212ENST00000525839 WASHC2AQ641Q2 1341 aa17■□□□□ 0.31
ARHGEF4-212ENST00000525839 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
ARHGEF4-212ENST00000525839 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
ARHGEF4-212ENST00000525839 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
ARHGEF4-212ENST00000525839 CUX1P39880 1505 aa16.98■□□□□ 0.31
ARHGEF4-212ENST00000525839 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
ARHGEF4-212ENST00000525839 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF4-212ENST00000525839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.95■□□□□ 0.3
ARHGEF4-212ENST00000525839 FAM9BQ8IZU0 186 aa16.95■□□□□ 0.3
ARHGEF4-212ENST00000525839 KDM5BQ9UGL1 1544 aa16.94■□□□□ 0.3
ARHGEF4-212ENST00000525839 CFAP43Q8NDM7 1665 aa16.94■□□□□ 0.3
ARHGEF4-212ENST00000525839 HSPA5P11021 654 aaKnown RBP16.94■□□□□ 0.3
ARHGEF4-212ENST00000525839 CNTLNQ9NXG0 1405 aa16.93■□□□□ 0.3
ARHGEF4-212ENST00000525839 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
ARHGEF4-212ENST00000525839 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
ARHGEF4-212ENST00000525839 UACAQ9BZF9 1416 aa16.93■□□□□ 0.3
ARHGEF4-212ENST00000525839 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
ARHGEF4-212ENST00000525839 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
ARHGEF4-212ENST00000525839 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF4-212ENST00000525839 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
ARHGEF4-212ENST00000525839 PCF11O94913 1555 aaKnown RBP16.88■□□□□ 0.29
ARHGEF4-212ENST00000525839 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
ARHGEF4-212ENST00000525839 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
ARHGEF4-212ENST00000525839 IGF1RP08069 1367 aa16.86■□□□□ 0.29
ARHGEF4-212ENST00000525839 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF4-212ENST00000525839 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
ARHGEF4-212ENST00000525839 AKNAQ7Z591 1439 aa16.85■□□□□ 0.29
ARHGEF4-212ENST00000525839 SMG6Q86US8 1419 aaKnown RBP16.84■□□□□ 0.29
ARHGEF4-212ENST00000525839 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.29
ARHGEF4-212ENST00000525839 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
ARHGEF4-212ENST00000525839 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
ARHGEF4-212ENST00000525839 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
ARHGEF4-212ENST00000525839 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF4-212ENST00000525839 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
ARHGEF4-212ENST00000525839 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
ARHGEF4-212ENST00000525839 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
ARHGEF4-212ENST00000525839 C11orf95C9JLR9 678 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF4-212ENST00000525839 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
ARHGEF4-212ENST00000525839 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
ARHGEF4-212ENST00000525839 NAIPQ13075 1403 aa16.79■□□□□ 0.28
ARHGEF4-212ENST00000525839 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
ARHGEF4-212ENST00000525839 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
ARHGEF4-212ENST00000525839 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
ARHGEF4-212ENST00000525839 NEFMP07197 916 aa16.78■□□□□ 0.28
ARHGEF4-212ENST00000525839 UBE2Q2Q8WVN8 375 aa16.77■□□□□ 0.28
ARHGEF4-212ENST00000525839 WASHC2CQ9Y4E1 1318 aa16.77■□□□□ 0.27
ARHGEF4-212ENST00000525839 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
ARHGEF4-212ENST00000525839 FMN1Q68DA7 1419 aa16.75■□□□□ 0.27
ARHGEF4-212ENST00000525839 FHOD3Q2V2M9 1422 aa16.74■□□□□ 0.27
ARHGEF4-212ENST00000525839 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
ARHGEF4-212ENST00000525839 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
ARHGEF4-212ENST00000525839 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
ARHGEF4-212ENST00000525839 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF4-212ENST00000525839 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF4-212ENST00000525839 CFTRP13569 1480 aa16.68■□□□□ 0.26
ARHGEF4-212ENST00000525839 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
ARHGEF4-212ENST00000525839 L3MBTL2Q969R5 705 aa16.68■□□□□ 0.26
ARHGEF4-212ENST00000525839 TCERG1O14776 1098 aaKnown RBP16.67■□□□□ 0.26
ARHGEF4-212ENST00000525839 PDE4AP27815 886 aa16.66■□□□□ 0.26
ARHGEF4-212ENST00000525839 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
ARHGEF4-212ENST00000525839 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
ARHGEF4-212ENST00000525839 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
ARHGEF4-212ENST00000525839 EFCAB5A4FU69 1503 aa16.64■□□□□ 0.25
ARHGEF4-212ENST00000525839 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
ARHGEF4-212ENST00000525839 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
ARHGEF4-212ENST00000525839 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
ARHGEF4-212ENST00000525839 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
ARHGEF4-212ENST00000525839 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms