RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
SF3B2-204ENST00000525207 IGF1RP08069 1367 aa16.44■□□□□ 0.22
SF3B2-204ENST00000525207 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-204ENST00000525207 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
SF3B2-204ENST00000525207 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
SF3B2-204ENST00000525207 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-204ENST00000525207 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
SF3B2-204ENST00000525207 JPH4Q96JJ6 628 aa16.35■□□□□ 0.21
SF3B2-204ENST00000525207 IQGAP2Q13576 1575 aa16.33■□□□□ 0.2
SF3B2-204ENST00000525207 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
SF3B2-204ENST00000525207 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
SF3B2-204ENST00000525207 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
SF3B2-204ENST00000525207 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
SF3B2-204ENST00000525207 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
SF3B2-204ENST00000525207 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
SF3B2-204ENST00000525207 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
SF3B2-204ENST00000525207 DISP1Q96F81 1524 aa16.2■□□□□ 0.18
SF3B2-204ENST00000525207 DIP2BQ9P265 1576 aa16.2■□□□□ 0.18
SF3B2-204ENST00000525207 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
SF3B2-204ENST00000525207 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
SF3B2-204ENST00000525207 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
SF3B2-204ENST00000525207 PTPRGP23470 1445 aa16.16■□□□□ 0.18
SF3B2-204ENST00000525207 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
SF3B2-204ENST00000525207 ABCC2Q92887 1545 aa16.13■□□□□ 0.17
SF3B2-204ENST00000525207 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
SF3B2-204ENST00000525207 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
SF3B2-204ENST00000525207 UACAQ9BZF9 1416 aa16.08■□□□□ 0.16
SF3B2-204ENST00000525207 ZCCHC11Q5TAX3 1644 aaKnown RBP16.05■□□□□ 0.16
SF3B2-204ENST00000525207 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
SF3B2-204ENST00000525207 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
SF3B2-204ENST00000525207 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
SF3B2-204ENST00000525207 EEA1Q15075 1411 aa16.03■□□□□ 0.16
SF3B2-204ENST00000525207 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
SF3B2-204ENST00000525207 FAM69CQ0P6D2 419 aa16.03■□□□□ 0.16
SF3B2-204ENST00000525207 ASXL2Q76L83 1435 aa16.02■□□□□ 0.16
SF3B2-204ENST00000525207 GLI2P10070 1586 aa16.02■□□□□ 0.16
SF3B2-204ENST00000525207 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
SF3B2-204ENST00000525207 ABCA8O94911 1581 aa16■□□□□ 0.15
SF3B2-204ENST00000525207 PPRC1Q5VV67 1664 aaKnown RBP16■□□□□ 0.15
SF3B2-204ENST00000525207 KDM6BO15054 1643 aa15.99■□□□□ 0.15
SF3B2-204ENST00000525207 SAMD9Q5K651 1589 aa15.99■□□□□ 0.15
SF3B2-204ENST00000525207 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
SF3B2-204ENST00000525207 KIF21BO75037 1637 aa15.96■□□□□ 0.15
SF3B2-204ENST00000525207 EPRSP07814 1512 aaKnown RBP15.95■□□□□ 0.14
SF3B2-204ENST00000525207 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
SF3B2-204ENST00000525207 WDR7Q9Y4E6 1490 aa15.94■□□□□ 0.14
SF3B2-204ENST00000525207 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
SF3B2-204ENST00000525207 RAPGEF6Q8TEU7 1601 aa15.87■□□□□ 0.13
SF3B2-204ENST00000525207 TEX14Q8IWB6 1497 aa15.85■□□□□ 0.13
SF3B2-204ENST00000525207 EFCAB5A4FU69 1503 aa15.85■□□□□ 0.13
SF3B2-204ENST00000525207 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
SF3B2-204ENST00000525207 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
SF3B2-204ENST00000525207 ATP10BO94823 1461 aa15.8■□□□□ 0.12
SF3B2-204ENST00000525207 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
SF3B2-204ENST00000525207 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
SF3B2-204ENST00000525207 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
SF3B2-204ENST00000525207 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-204ENST00000525207 ABCA9Q8IUA7 1624 aa15.78■□□□□ 0.12
SF3B2-204ENST00000525207 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
SF3B2-204ENST00000525207 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
SF3B2-204ENST00000525207 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
SF3B2-204ENST00000525207 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
SF3B2-204ENST00000525207 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
SF3B2-204ENST00000525207 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
SF3B2-204ENST00000525207 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
SF3B2-204ENST00000525207 ARAP3Q8WWN8 1544 aa15.66■□□□□ 0.1
SF3B2-204ENST00000525207 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
SF3B2-204ENST00000525207 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
SF3B2-204ENST00000525207 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
SF3B2-204ENST00000525207 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
SF3B2-204ENST00000525207 NEO1Q92859 1461 aa15.63■□□□□ 0.09
SF3B2-204ENST00000525207 FRMPD1Q5SYB0 1578 aa15.62■□□□□ 0.09
SF3B2-204ENST00000525207 KDM4FA0A1W2PPD8 638 aa15.62■□□□□ 0.09
SF3B2-204ENST00000525207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.62■□□□□ 0.09
SF3B2-204ENST00000525207 CFAP74Q9C0B2 1584 aa15.62■□□□□ 0.09
SF3B2-204ENST00000525207 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
SF3B2-204ENST00000525207 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
SF3B2-204ENST00000525207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
SF3B2-204ENST00000525207 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
SF3B2-204ENST00000525207 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
SF3B2-204ENST00000525207 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.08
SF3B2-204ENST00000525207 RICTORQ6R327 1708 aa15.57■□□□□ 0.08
SF3B2-204ENST00000525207 MYO5CQ9NQX4 1742 aa15.54■□□□□ 0.08
SF3B2-204ENST00000525207 KIF14Q15058 1648 aa15.54■□□□□ 0.08
SF3B2-204ENST00000525207 ARHGEF40Q8TER5 1519 aa15.54■□□□□ 0.08
SF3B2-204ENST00000525207 FANCAO15360 1455 aa15.54■□□□□ 0.08
SF3B2-204ENST00000525207 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
SF3B2-204ENST00000525207 ZMYM4Q5VZL5 1548 aa15.51■□□□□ 0.07
SF3B2-204ENST00000525207 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
SF3B2-204ENST00000525207 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
SF3B2-204ENST00000525207 TROQ12816 1431 aaPredicted RBP15.49■□□□□ 0.07
SF3B2-204ENST00000525207 AKNAQ7Z591 1439 aa15.49■□□□□ 0.07
SF3B2-204ENST00000525207 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
SF3B2-204ENST00000525207 FYCO1Q9BQS8 1478 aa15.48■□□□□ 0.07
SF3B2-204ENST00000525207 PLCH2O75038 1416 aa15.47■□□□□ 0.07
SF3B2-204ENST00000525207 RAPGEF3O95398 923 aa15.47■□□□□ 0.07
SF3B2-204ENST00000525207 CLIP1P30622 1438 aa15.46■□□□□ 0.07
SF3B2-204ENST00000525207 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
SF3B2-204ENST00000525207 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.06
SF3B2-204ENST00000525207 PREX2Q70Z35 1606 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms