RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 PRG4Q92954 1404 aaPredicted RBP21.59■■□□□ 1.05
HDAC2-217ENST00000524334 SHROOM2Q13796 1616 aa21.56■■□□□ 1.04
HDAC2-217ENST00000524334 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
HDAC2-217ENST00000524334 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
HDAC2-217ENST00000524334 ERCC6L2Q5T890 1561 aa21.51■■□□□ 1.03
HDAC2-217ENST00000524334 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
HDAC2-217ENST00000524334 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
HDAC2-217ENST00000524334 EEA1Q15075 1411 aa21.45■■□□□ 1.02
HDAC2-217ENST00000524334 PRXQ9BXM0 1461 aa21.44■■□□□ 1.02
HDAC2-217ENST00000524334 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
HDAC2-217ENST00000524334 CARMIL2Q6F5E8 1435 aa21.42■■□□□ 1.02
HDAC2-217ENST00000524334 IQGAP2Q13576 1575 aa21.39■■□□□ 1.01
HDAC2-217ENST00000524334 PTPRGP23470 1445 aa21.36■■□□□ 1.01
HDAC2-217ENST00000524334 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
HDAC2-217ENST00000524334 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
HDAC2-217ENST00000524334 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1.01
HDAC2-217ENST00000524334 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
HDAC2-217ENST00000524334 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
HDAC2-217ENST00000524334 DISP1Q96F81 1524 aa21.27■■□□□ 1
HDAC2-217ENST00000524334 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
HDAC2-217ENST00000524334 UACAQ9BZF9 1416 aa21.17■□□□□ 0.98
HDAC2-217ENST00000524334 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
HDAC2-217ENST00000524334 KIAA0556O60303 1618 aa21.15■□□□□ 0.98
HDAC2-217ENST00000524334 ADCY10Q96PN6 1610 aa21.15■□□□□ 0.98
HDAC2-217ENST00000524334 UHRF1BP1LA0JNW5 1464 aa21.15■□□□□ 0.98
HDAC2-217ENST00000524334 ABCC2Q92887 1545 aa21.12■□□□□ 0.97
HDAC2-217ENST00000524334 MAPKBP1O60336 1514 aa21.11■□□□□ 0.97
HDAC2-217ENST00000524334 KIF21BO75037 1637 aa21.11■□□□□ 0.97
HDAC2-217ENST00000524334 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
HDAC2-217ENST00000524334 FAM69CQ0P6D2 419 aa21.09■□□□□ 0.97
HDAC2-217ENST00000524334 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
HDAC2-217ENST00000524334 ABCC10Q5T3U5 1492 aa21.07■□□□□ 0.96
HDAC2-217ENST00000524334 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
HDAC2-217ENST00000524334 PLB1Q6P1J6 1458 aa21.03■□□□□ 0.96
HDAC2-217ENST00000524334 EHMT2Q96KQ7 1210 aa21.03■□□□□ 0.96
HDAC2-217ENST00000524334 KDM5BQ9UGL1 1544 aa21.03■□□□□ 0.96
HDAC2-217ENST00000524334 ASXL2Q76L83 1435 aa21■□□□□ 0.95
HDAC2-217ENST00000524334 SAMD9Q5K651 1589 aa20.97■□□□□ 0.95
HDAC2-217ENST00000524334 ABCA8O94911 1581 aa20.96■□□□□ 0.95
HDAC2-217ENST00000524334 DIP2BQ9P265 1576 aa20.93■□□□□ 0.94
HDAC2-217ENST00000524334 EFCAB5A4FU69 1503 aa20.92■□□□□ 0.94
HDAC2-217ENST00000524334 FHOD3Q2V2M9 1422 aa20.9■□□□□ 0.94
HDAC2-217ENST00000524334 ZCCHC11Q5TAX3 1644 aaKnown RBP20.88■□□□□ 0.93
HDAC2-217ENST00000524334 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
HDAC2-217ENST00000524334 WDR7Q9Y4E6 1490 aa20.87■□□□□ 0.93
HDAC2-217ENST00000524334 EPRSP07814 1512 aaKnown RBP20.86■□□□□ 0.93
HDAC2-217ENST00000524334 ATP10BO94823 1461 aa20.86■□□□□ 0.93
HDAC2-217ENST00000524334 GLI2P10070 1586 aa20.85■□□□□ 0.93
HDAC2-217ENST00000524334 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
HDAC2-217ENST00000524334 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
HDAC2-217ENST00000524334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
HDAC2-217ENST00000524334 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
HDAC2-217ENST00000524334 FMN1Q68DA7 1419 aa20.8■□□□□ 0.92
HDAC2-217ENST00000524334 RAPGEF6Q8TEU7 1601 aa20.8■□□□□ 0.92
HDAC2-217ENST00000524334 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
HDAC2-217ENST00000524334 NUP153P49790 1475 aaKnown RBP20.78■□□□□ 0.92
HDAC2-217ENST00000524334 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
HDAC2-217ENST00000524334 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
HDAC2-217ENST00000524334 CD109Q6YHK3 1445 aa20.73■□□□□ 0.91
HDAC2-217ENST00000524334 TEX14Q8IWB6 1497 aa20.72■□□□□ 0.91
HDAC2-217ENST00000524334 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
HDAC2-217ENST00000524334 CLIP1P30622 1438 aa20.69■□□□□ 0.9
HDAC2-217ENST00000524334 MAP3K4Q9Y6R4 1608 aa20.68■□□□□ 0.9
HDAC2-217ENST00000524334 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
HDAC2-217ENST00000524334 KDM6BO15054 1643 aa20.64■□□□□ 0.9
HDAC2-217ENST00000524334 TSPOAP1O95153 1857 aa20.63■□□□□ 0.89
HDAC2-217ENST00000524334 CASKIN1Q8WXD9 1431 aa20.61■□□□□ 0.89
HDAC2-217ENST00000524334 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
HDAC2-217ENST00000524334 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
HDAC2-217ENST00000524334 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
HDAC2-217ENST00000524334 PPRC1Q5VV67 1664 aaKnown RBP20.6■□□□□ 0.89
HDAC2-217ENST00000524334 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
HDAC2-217ENST00000524334 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
HDAC2-217ENST00000524334 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
HDAC2-217ENST00000524334 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
HDAC2-217ENST00000524334 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
HDAC2-217ENST00000524334 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
HDAC2-217ENST00000524334 FYCO1Q9BQS8 1478 aa20.52■□□□□ 0.88
HDAC2-217ENST00000524334 NEO1Q92859 1461 aa20.5■□□□□ 0.87
HDAC2-217ENST00000524334 ARAP3Q8WWN8 1544 aa20.5■□□□□ 0.87
HDAC2-217ENST00000524334 TROQ12816 1431 aaPredicted RBP20.5■□□□□ 0.87
HDAC2-217ENST00000524334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.874e-25■□□□□ 8.9
HDAC2-217ENST00000524334 PCF11O94913 1555 aaKnown RBP20.46■□□□□ 0.87
HDAC2-217ENST00000524334 PLCH2O75038 1416 aa20.45■□□□□ 0.86
HDAC2-217ENST00000524334 EFCAB2Q5VUJ9 269 aa20.44■□□□□ 0.86
HDAC2-217ENST00000524334 FANCAO15360 1455 aa20.43■□□□□ 0.86
HDAC2-217ENST00000524334 RAPGEF3O95398 923 aa20.42■□□□□ 0.86
HDAC2-217ENST00000524334 AKNAQ7Z591 1439 aa20.42■□□□□ 0.86
HDAC2-217ENST00000524334 TTC37Q6PGP7 1564 aa20.39■□□□□ 0.85
HDAC2-217ENST00000524334 KIF14Q15058 1648 aa20.38■□□□□ 0.85
HDAC2-217ENST00000524334 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
HDAC2-217ENST00000524334 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
HDAC2-217ENST00000524334 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
HDAC2-217ENST00000524334 LRRIQ1Q96JM4 1722 aa20.33■□□□□ 0.85
HDAC2-217ENST00000524334 KDM4FA0A1W2PPD8 638 aa20.33■□□□□ 0.85
HDAC2-217ENST00000524334 SCAPERQ9BY12 1400 aa20.32■□□□□ 0.84
HDAC2-217ENST00000524334 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
HDAC2-217ENST00000524334 ADGRL1O94910 1474 aa20.3■□□□□ 0.84
HDAC2-217ENST00000524334 ARHGAP5Q13017 1502 aa20.29■□□□□ 0.84
HDAC2-217ENST00000524334 CCNB3Q8WWL7 1395 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms