RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 KDM6BO15054 1643 aa32.29■■■□□ 2.76
PVT1-220ENST00000524165 WRNQ14191 1432 aaPredicted RBP eCLIP32.28■■■□□ 2.76
PVT1-220ENST00000524165 NPM1P06748 294 aaKnown RBP eCLIP32.24■■■□□ 2.75
PVT1-220ENST00000524165 ERICH3Q5RHP9 1530 aa32.22■■■□□ 2.75
PVT1-220ENST00000524165 JPH4Q96JJ6 628 aa32.21■■■□□ 2.75
PVT1-220ENST00000524165 ADCY10Q96PN6 1610 aa32.13■■■□□ 2.73
PVT1-220ENST00000524165 TSPOAP1O95153 1857 aa32.12■■■□□ 2.73
PVT1-220ENST00000524165 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
PVT1-220ENST00000524165 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
PVT1-220ENST00000524165 RUSC2Q8N2Y8 1516 aa32.07■■■□□ 2.72
PVT1-220ENST00000524165 ADGRL1O94910 1474 aa31.9■■■□□ 2.7
PVT1-220ENST00000524165 HECW2Q9P2P5 1572 aa31.81■■■□□ 2.68
PVT1-220ENST00000524165 KIAA0586Q9BVV6 1533 aa31.8■■■□□ 2.68
PVT1-220ENST00000524165 PPRC1Q5VV67 1664 aaKnown RBP31.8■■■□□ 2.68
PVT1-220ENST00000524165 GLI2P10070 1586 aa31.75■■■□□ 2.67
PVT1-220ENST00000524165 PTPRGP23470 1445 aa31.68■■■□□ 2.66
PVT1-220ENST00000524165 PLB1Q6P1J6 1458 aa31.68■■■□□ 2.66
PVT1-220ENST00000524165 ABCC2Q92887 1545 aa31.68■■■□□ 2.66
PVT1-220ENST00000524165 ASXL2Q76L83 1435 aa31.66■■■□□ 2.66
PVT1-220ENST00000524165 COL17A1Q9UMD9 1497 aaPredicted RBP31.6■■■□□ 2.65
PVT1-220ENST00000524165 CUL7Q14999 1698 aa31.57■■■□□ 2.64
PVT1-220ENST00000524165 TNIKQ9UKE5 1360 aa31.55■■■□□ 2.64
PVT1-220ENST00000524165 MAP3K4Q9Y6R4 1608 aa31.54■■■□□ 2.64
PVT1-220ENST00000524165 UHRF1BP1LA0JNW5 1464 aa31.52■■■□□ 2.64
PVT1-220ENST00000524165 TEX14Q8IWB6 1497 aa31.52■■■□□ 2.64
PVT1-220ENST00000524165 CARMIL2Q6F5E8 1435 aa31.51■■■□□ 2.64
PVT1-220ENST00000524165 IGF1RP08069 1367 aa31.51■■■□□ 2.63
PVT1-220ENST00000524165 FBXO41Q8TF61 875 aa31.48■■■□□ 2.63
PVT1-220ENST00000524165 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
PVT1-220ENST00000524165 EPRSP07814 1512 aaKnown RBP31.47■■■□□ 2.63
PVT1-220ENST00000524165 SUPT5HO00267 1087 aaKnown RBP31.43■■■□□ 2.62
PVT1-220ENST00000524165 UACAQ9BZF9 1416 aa31.41■■■□□ 2.62
PVT1-220ENST00000524165 KIF27Q86VH2 1401 aa31.4■■■□□ 2.62
PVT1-220ENST00000524165 KDM5BQ9UGL1 1544 aa31.39■■■□□ 2.61
PVT1-220ENST00000524165 IQGAP2Q13576 1575 aa31.34■■■□□ 2.61
PVT1-220ENST00000524165 ZCCHC11Q5TAX3 1644 aaKnown RBP31.31■■■□□ 2.6
PVT1-220ENST00000524165 CARMIL1Q5VZK9 1371 aa31.27■■■□□ 2.6
PVT1-220ENST00000524165 DISP1Q96F81 1524 aa31.26■■■□□ 2.59
PVT1-220ENST00000524165 WDR7Q9Y4E6 1490 aa31.19■■■□□ 2.58
PVT1-220ENST00000524165 MAGI3Q5TCQ9 1506 aa31.17■■■□□ 2.58
PVT1-220ENST00000524165 CFAP43Q8NDM7 1665 aa31.15■■■□□ 2.58
PVT1-220ENST00000524165 KIF21BO75037 1637 aa31.14■■■□□ 2.58
PVT1-220ENST00000524165 UGGT2Q9NYU1 1516 aa31.11■■■□□ 2.57
PVT1-220ENST00000524165 CD109Q6YHK3 1445 aa31.1■■■□□ 2.57
PVT1-220ENST00000524165 KIAA0556O60303 1618 aa31.07■■■□□ 2.56
PVT1-220ENST00000524165 PTPRMP28827 1452 aa31■■■□□ 2.55
PVT1-220ENST00000524165 ADAMTSL3P82987 1691 aa31■■■□□ 2.55
PVT1-220ENST00000524165 ARAP3Q8WWN8 1544 aa30.96■■■□□ 2.55
PVT1-220ENST00000524165 LMTK3Q96Q04 1460 aa30.93■■■□□ 2.54
PVT1-220ENST00000524165 KCNH8Q96L42 1107 aa30.92■■■□□ 2.54
PVT1-220ENST00000524165 PCF11O94913 1555 aaKnown RBP30.9■■■□□ 2.54
PVT1-220ENST00000524165 RAPGEF2Q9Y4G8 1499 aa30.89■■■□□ 2.53
PVT1-220ENST00000524165 ABCA8O94911 1581 aa30.86■■■□□ 2.53
PVT1-220ENST00000524165 BCORL1Q5H9F3 1711 aa30.81■■■□□ 2.52
PVT1-220ENST00000524165 PHLDB1Q86UU1 1377 aa30.79■■■□□ 2.52
PVT1-220ENST00000524165 GOLGA3Q08378 1498 aa30.76■■■□□ 2.52
PVT1-220ENST00000524165 MADDQ8WXG6 1647 aa30.76■■■□□ 2.51
PVT1-220ENST00000524165 CTTNBP2Q8WZ74 1663 aa30.75■■■□□ 2.51
PVT1-220ENST00000524165 ABCA9Q8IUA7 1624 aa30.69■■■□□ 2.5
PVT1-220ENST00000524165 RAPGEF3O95398 923 aa30.65■■■□□ 2.5
PVT1-220ENST00000524165 NEO1Q92859 1461 aa30.63■■■□□ 2.49
PVT1-220ENST00000524165 RIMS1Q86UR5 1692 aaKnown RBP30.63■■■□□ 2.49
PVT1-220ENST00000524165 CERKQ8TCT0 537 aa30.63■■■□□ 2.49
PVT1-220ENST00000524165 ARID4BQ4LE39 1312 aaPredicted RBP30.63■■■□□ 2.49
PVT1-220ENST00000524165 SOCS7O14512 581 aa30.62■■■□□ 2.49
PVT1-220ENST00000524165 FRMPD1Q5SYB0 1578 aa30.61■■■□□ 2.49
PVT1-220ENST00000524165 ATP10BO94823 1461 aa30.57■■■□□ 2.48
PVT1-220ENST00000524165 HSPA2P54652 639 aa30.56■■■□□ 2.48
PVT1-220ENST00000524165 ILDR2Q71H61 639 aa30.56■■■□□ 2.48
PVT1-220ENST00000524165 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
PVT1-220ENST00000524165 ARHGEF40Q8TER5 1519 aa30.52■■■□□ 2.48
PVT1-220ENST00000524165 FAM9AQ8IZU1 332 aaPredicted RBP30.5■■■□□ 2.47
PVT1-220ENST00000524165 ARID3CA6NKF2 412 aa30.47■■■□□ 2.47
PVT1-220ENST00000524165 RICTORQ6R327 1708 aa30.44■■■□□ 2.46
PVT1-220ENST00000524165 POGZQ7Z3K3 1410 aa30.42■■■□□ 2.46
PVT1-220ENST00000524165 FANCAO15360 1455 aa30.39■■■□□ 2.46
PVT1-220ENST00000524165 DENND4BO75064 1496 aaPredicted RBP30.38■■■□□ 2.45
PVT1-220ENST00000524165 FHOD3Q2V2M9 1422 aa30.36■■■□□ 2.45
PVT1-220ENST00000524165 AKNAQ7Z591 1439 aa30.34■■■□□ 2.45
PVT1-220ENST00000524165 PLPPR3Q6T4P5 718 aa30.34■■■□□ 2.45
PVT1-220ENST00000524165 RAPGEF6Q8TEU7 1601 aa30.33■■■□□ 2.45
PVT1-220ENST00000524165 FER1L4A9Z1Z3 1794 aa30.32■■■□□ 2.44
PVT1-220ENST00000524165 TTC37Q6PGP7 1564 aa30.32■■■□□ 2.44
PVT1-220ENST00000524165 ZMYM4Q5VZL5 1548 aa30.32■■■□□ 2.44
PVT1-220ENST00000524165 SIGLEC1Q9BZZ2 1709 aa30.31■■■□□ 2.44
PVT1-220ENST00000524165 PRXQ9BXM0 1461 aa30.31■■■□□ 2.44
PVT1-220ENST00000524165 SPATA31D1Q6ZQQ2 1576 aa30.3■■■□□ 2.44
PVT1-220ENST00000524165 CFAP74Q9C0B2 1584 aa30.3■■■□□ 2.44
PVT1-220ENST00000524165 P3H3Q8IVL6 736 aa30.28■■■□□ 2.44
PVT1-220ENST00000524165 EFCAB5A4FU69 1503 aa30.27■■■□□ 2.44
PVT1-220ENST00000524165 PREX1Q8TCU6 1659 aa30.27■■■□□ 2.44
PVT1-220ENST00000524165 ZFYVE16Q7Z3T8 1539 aa30.27■■■□□ 2.44
PVT1-220ENST00000524165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.25■■■□□ 2.43
PVT1-220ENST00000524165 HNRNPUL2Q1KMD3 747 aaKnown RBP30.25■■■□□ 2.43
PVT1-220ENST00000524165 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
PVT1-220ENST00000524165 YEATS2Q9ULM3 1422 aa30.23■■■□□ 2.43
PVT1-220ENST00000524165 DMRT2Q9Y5R5 561 aa30.23■■■□□ 2.43
PVT1-220ENST00000524165 SAMD9Q5K651 1589 aa30.23■■■□□ 2.43
PVT1-220ENST00000524165 STRCQ7RTU9 1775 aa30.2■■■□□ 2.43
PVT1-220ENST00000524165 NUP153P49790 1475 aaKnown RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms