RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 KIAA0586Q9BVV6 1533 aa21.07■□□□□ 0.96
VEGFA-225ENST00000523950 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
VEGFA-225ENST00000523950 PRXQ9BXM0 1461 aa21.03■□□□□ 0.96
VEGFA-225ENST00000523950 JPH4Q96JJ6 628 aa20.99■□□□□ 0.95
VEGFA-225ENST00000523950 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
VEGFA-225ENST00000523950 IQGAP2Q13576 1575 aa20.97■□□□□ 0.95
VEGFA-225ENST00000523950 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
VEGFA-225ENST00000523950 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.95
VEGFA-225ENST00000523950 CYB5RLQ6IPT4 315 aa20.95■□□□□ 0.94
VEGFA-225ENST00000523950 CTTNBP2Q8WZ74 1663 aa20.95■□□□□ 0.94
VEGFA-225ENST00000523950 KIF21BO75037 1637 aa20.88■□□□□ 0.93
VEGFA-225ENST00000523950 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
VEGFA-225ENST00000523950 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
VEGFA-225ENST00000523950 FAM9AQ8IZU1 332 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-225ENST00000523950 DISP1Q96F81 1524 aa20.78■□□□□ 0.92
VEGFA-225ENST00000523950 KIAA0556O60303 1618 aa20.77■□□□□ 0.92
VEGFA-225ENST00000523950 GOLGA3Q08378 1498 aa20.76■□□□□ 0.91
VEGFA-225ENST00000523950 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
VEGFA-225ENST00000523950 PTPRGP23470 1445 aa20.72■□□□□ 0.91
VEGFA-225ENST00000523950 SAMD9Q5K651 1589 aa20.66■□□□□ 0.9
VEGFA-225ENST00000523950 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
VEGFA-225ENST00000523950 UHRF1BP1LA0JNW5 1464 aa20.62■□□□□ 0.89
VEGFA-225ENST00000523950 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
VEGFA-225ENST00000523950 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
VEGFA-225ENST00000523950 ABCC2Q92887 1545 aa20.59■□□□□ 0.89
VEGFA-225ENST00000523950 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
VEGFA-225ENST00000523950 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
VEGFA-225ENST00000523950 MAPKBP1O60336 1514 aa20.57■□□□□ 0.88
VEGFA-225ENST00000523950 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-225ENST00000523950 ABCA8O94911 1581 aa20.53■□□□□ 0.88
VEGFA-225ENST00000523950 KDM5BQ9UGL1 1544 aa20.51■□□□□ 0.87
VEGFA-225ENST00000523950 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-225ENST00000523950 PLB1Q6P1J6 1458 aa20.5■□□□□ 0.87
VEGFA-225ENST00000523950 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
VEGFA-225ENST00000523950 P3H3Q8IVL6 736 aa20.47■□□□□ 0.87
VEGFA-225ENST00000523950 ZCCHC11Q5TAX3 1644 aaKnown RBP20.46■□□□□ 0.87
VEGFA-225ENST00000523950 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
VEGFA-225ENST00000523950 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-225ENST00000523950 RAPGEF6Q8TEU7 1601 aa20.44■□□□□ 0.86
VEGFA-225ENST00000523950 KIF13AQ9H1H9 1805 aa20.43■□□□□ 0.86
VEGFA-225ENST00000523950 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
VEGFA-225ENST00000523950 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
VEGFA-225ENST00000523950 DIP2BQ9P265 1576 aa20.41■□□□□ 0.86
VEGFA-225ENST00000523950 ASXL2Q76L83 1435 aa20.4■□□□□ 0.86
VEGFA-225ENST00000523950 FMN1Q68DA7 1419 aa20.38■□□□□ 0.85
VEGFA-225ENST00000523950 GLI2P10070 1586 aa20.34■□□□□ 0.85
VEGFA-225ENST00000523950 NUP153P49790 1475 aaKnown RBP20.33■□□□□ 0.85
VEGFA-225ENST00000523950 WDR7Q9Y4E6 1490 aa20.33■□□□□ 0.85
VEGFA-225ENST00000523950 ATP10BO94823 1461 aa20.32■□□□□ 0.84
VEGFA-225ENST00000523950 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
VEGFA-225ENST00000523950 CLIP1P30622 1438 aa20.32■□□□□ 0.84
VEGFA-225ENST00000523950 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
VEGFA-225ENST00000523950 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
VEGFA-225ENST00000523950 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
VEGFA-225ENST00000523950 CEP162Q5TB80 1403 aa20.23■□□□□ 0.83
VEGFA-225ENST00000523950 CFAP43Q8NDM7 1665 aa20.22■□□□□ 0.83
VEGFA-225ENST00000523950 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
VEGFA-225ENST00000523950 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
VEGFA-225ENST00000523950 PCF11O94913 1555 aaKnown RBP20.2■□□□□ 0.82
VEGFA-225ENST00000523950 TSPOAP1O95153 1857 aa20.2■□□□□ 0.82
VEGFA-225ENST00000523950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-225ENST00000523950 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
VEGFA-225ENST00000523950 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
VEGFA-225ENST00000523950 PPRC1Q5VV67 1664 aaKnown RBP20.17■□□□□ 0.82
VEGFA-225ENST00000523950 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
VEGFA-225ENST00000523950 CCDC18Q5T9S5 1454 aa20.17■□□□□ 0.82
VEGFA-225ENST00000523950 CDK13Q14004 1512 aaKnown RBP20.17■□□□□ 0.82
VEGFA-225ENST00000523950 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
VEGFA-225ENST00000523950 TEX14Q8IWB6 1497 aa20.15■□□□□ 0.82
VEGFA-225ENST00000523950 ABCA9Q8IUA7 1624 aa20.15■□□□□ 0.82
VEGFA-225ENST00000523950 LRRIQ1Q96JM4 1722 aa20.15■□□□□ 0.82
VEGFA-225ENST00000523950 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
VEGFA-225ENST00000523950 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-225ENST00000523950 MAGI3Q5TCQ9 1506 aa20.12■□□□□ 0.81
VEGFA-225ENST00000523950 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-225ENST00000523950 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
VEGFA-225ENST00000523950 KDM6BO15054 1643 aa20.08■□□□□ 0.8
VEGFA-225ENST00000523950 TROQ12816 1431 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-225ENST00000523950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■□□□ 12.9
VEGFA-225ENST00000523950 KIF14Q15058 1648 aa20.04■□□□□ 0.8
VEGFA-225ENST00000523950 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
VEGFA-225ENST00000523950 TTC37Q6PGP7 1564 aa20■□□□□ 0.79
VEGFA-225ENST00000523950 PHLDB1Q86UU1 1377 aa20■□□□□ 0.79
VEGFA-225ENST00000523950 CFAP74Q9C0B2 1584 aa19.99■□□□□ 0.79
VEGFA-225ENST00000523950 NEO1Q92859 1461 aa19.99■□□□□ 0.79
VEGFA-225ENST00000523950 MYO5CQ9NQX4 1742 aa19.96■□□□□ 0.79
VEGFA-225ENST00000523950 ARAP3Q8WWN8 1544 aa19.96■□□□□ 0.79
VEGFA-225ENST00000523950 PLCH2O75038 1416 aa19.93■□□□□ 0.78
VEGFA-225ENST00000523950 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
VEGFA-225ENST00000523950 EHBP1L1Q8N3D4 1523 aa19.92■□□□□ 0.78
VEGFA-225ENST00000523950 FANCAO15360 1455 aa19.91■□□□□ 0.78
VEGFA-225ENST00000523950 MTUS2Q5JR59 1369 aa19.9■□□□□ 0.78
VEGFA-225ENST00000523950 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
VEGFA-225ENST00000523950 TIAM1Q13009 1591 aa19.9■□□□□ 0.78
VEGFA-225ENST00000523950 PREX2Q70Z35 1606 aa19.87■□□□□ 0.77
VEGFA-225ENST00000523950 AKNAQ7Z591 1439 aa19.86■□□□□ 0.77
VEGFA-225ENST00000523950 CDC42BPAQ5VT25 1732 aa19.85■□□□□ 0.77
VEGFA-225ENST00000523950 CDC42BPBQ9Y5S2 1711 aa19.85■□□□□ 0.77
VEGFA-225ENST00000523950 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
VEGFA-225ENST00000523950 EFCAB2Q5VUJ9 269 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms