RNA–Protein interactions for RNA: ENST00000523366.1

ERGIC1-213, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 5

Gene ERGIC1, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-213ENST00000523366 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
ERGIC1-213ENST00000523366 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
ERGIC1-213ENST00000523366 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
ERGIC1-213ENST00000523366 RAPGEF2Q9Y4G8 1499 aa17.47■□□□□ 0.39
ERGIC1-213ENST00000523366 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
ERGIC1-213ENST00000523366 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
ERGIC1-213ENST00000523366 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
ERGIC1-213ENST00000523366 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
ERGIC1-213ENST00000523366 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
ERGIC1-213ENST00000523366 EEA1Q15075 1411 aa17.36■□□□□ 0.37
ERGIC1-213ENST00000523366 CTTNBP2Q8WZ74 1663 aa17.36■□□□□ 0.37
ERGIC1-213ENST00000523366 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
ERGIC1-213ENST00000523366 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
ERGIC1-213ENST00000523366 KIF21BO75037 1637 aa17.25■□□□□ 0.35
ERGIC1-213ENST00000523366 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
ERGIC1-213ENST00000523366 PTPRGP23470 1445 aa17.23■□□□□ 0.35
ERGIC1-213ENST00000523366 ADCY10Q96PN6 1610 aa17.23■□□□□ 0.35
ERGIC1-213ENST00000523366 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
ERGIC1-213ENST00000523366 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
ERGIC1-213ENST00000523366 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
ERGIC1-213ENST00000523366 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
ERGIC1-213ENST00000523366 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
ERGIC1-213ENST00000523366 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
ERGIC1-213ENST00000523366 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
ERGIC1-213ENST00000523366 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
ERGIC1-213ENST00000523366 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
ERGIC1-213ENST00000523366 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
ERGIC1-213ENST00000523366 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
ERGIC1-213ENST00000523366 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
ERGIC1-213ENST00000523366 PLB1Q6P1J6 1458 aa17.08■□□□□ 0.32
ERGIC1-213ENST00000523366 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
ERGIC1-213ENST00000523366 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
ERGIC1-213ENST00000523366 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
ERGIC1-213ENST00000523366 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
ERGIC1-213ENST00000523366 ABCA8O94911 1581 aa17.06■□□□□ 0.32
ERGIC1-213ENST00000523366 KDM5BQ9UGL1 1544 aa17.04■□□□□ 0.32
ERGIC1-213ENST00000523366 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
ERGIC1-213ENST00000523366 FHOD3Q2V2M9 1422 aa17.02■□□□□ 0.31
ERGIC1-213ENST00000523366 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
ERGIC1-213ENST00000523366 DIP2BQ9P265 1576 aa17■□□□□ 0.31
ERGIC1-213ENST00000523366 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
ERGIC1-213ENST00000523366 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
ERGIC1-213ENST00000523366 FAM69CQ0P6D2 419 aa16.97■□□□□ 0.31
ERGIC1-213ENST00000523366 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
ERGIC1-213ENST00000523366 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
ERGIC1-213ENST00000523366 TSPOAP1O95153 1857 aa16.94■□□□□ 0.3
ERGIC1-213ENST00000523366 ATP10BO94823 1461 aa16.93■□□□□ 0.3
ERGIC1-213ENST00000523366 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
ERGIC1-213ENST00000523366 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
ERGIC1-213ENST00000523366 GLI2P10070 1586 aa16.89■□□□□ 0.3
ERGIC1-213ENST00000523366 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
ERGIC1-213ENST00000523366 WDR7Q9Y4E6 1490 aa16.87■□□□□ 0.29
ERGIC1-213ENST00000523366 PPRC1Q5VV67 1664 aaKnown RBP16.87■□□□□ 0.29
ERGIC1-213ENST00000523366 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
ERGIC1-213ENST00000523366 KCNH8Q96L42 1107 aa16.83■□□□□ 0.28
ERGIC1-213ENST00000523366 MAP3K4Q9Y6R4 1608 aa16.83■□□□□ 0.28
ERGIC1-213ENST00000523366 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
ERGIC1-213ENST00000523366 CLIP1P30622 1438 aa16.81■□□□□ 0.28
ERGIC1-213ENST00000523366 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
ERGIC1-213ENST00000523366 CDK13Q14004 1512 aaKnown RBP16.79■□□□□ 0.28
ERGIC1-213ENST00000523366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
ERGIC1-213ENST00000523366 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
ERGIC1-213ENST00000523366 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
ERGIC1-213ENST00000523366 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
ERGIC1-213ENST00000523366 PCF11O94913 1555 aaKnown RBP16.74■□□□□ 0.27
ERGIC1-213ENST00000523366 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
ERGIC1-213ENST00000523366 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
ERGIC1-213ENST00000523366 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
ERGIC1-213ENST00000523366 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
ERGIC1-213ENST00000523366 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
ERGIC1-213ENST00000523366 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
ERGIC1-213ENST00000523366 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.27
ERGIC1-213ENST00000523366 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
ERGIC1-213ENST00000523366 KDM6BO15054 1643 aa16.7■□□□□ 0.26
ERGIC1-213ENST00000523366 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
ERGIC1-213ENST00000523366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERGIC1-213ENST00000523366 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
ERGIC1-213ENST00000523366 TTC37Q6PGP7 1564 aa16.65■□□□□ 0.26
ERGIC1-213ENST00000523366 KIF14Q15058 1648 aa16.63■□□□□ 0.25
ERGIC1-213ENST00000523366 TROQ12816 1431 aaPredicted RBP16.62■□□□□ 0.25
ERGIC1-213ENST00000523366 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
ERGIC1-213ENST00000523366 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
ERGIC1-213ENST00000523366 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
ERGIC1-213ENST00000523366 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
ERGIC1-213ENST00000523366 NEO1Q92859 1461 aa16.55■□□□□ 0.24
ERGIC1-213ENST00000523366 PLCH2O75038 1416 aa16.54■□□□□ 0.24
ERGIC1-213ENST00000523366 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
ERGIC1-213ENST00000523366 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
ERGIC1-213ENST00000523366 PHLDB1Q86UU1 1377 aa16.52■□□□□ 0.24
ERGIC1-213ENST00000523366 FANCAO15360 1455 aa16.52■□□□□ 0.23
ERGIC1-213ENST00000523366 AKNAQ7Z591 1439 aa16.52■□□□□ 0.23
ERGIC1-213ENST00000523366 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
ERGIC1-213ENST00000523366 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
ERGIC1-213ENST00000523366 FRMPD1Q5SYB0 1578 aa16.51■□□□□ 0.23
ERGIC1-213ENST00000523366 RICTORQ6R327 1708 aa16.5■□□□□ 0.23
ERGIC1-213ENST00000523366 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
ERGIC1-213ENST00000523366 CFAP74Q9C0B2 1584 aa16.48■□□□□ 0.23
ERGIC1-213ENST00000523366 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
ERGIC1-213ENST00000523366 EFCAB2Q5VUJ9 269 aa16.46■□□□□ 0.23
ERGIC1-213ENST00000523366 TIAM1Q13009 1591 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms