RNA–Protein interactions for RNA: ENST00000523366.1

ERGIC1-213, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 5

Gene ERGIC1, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-213ENST00000523366 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
ERGIC1-213ENST00000523366 CCDC180Q9P1Z9 1646 aa22.48■■□□□ 1.19
ERGIC1-213ENST00000523366 ABCC9O60706 1549 aa22.04■■□□□ 1.12
ERGIC1-213ENST00000523366 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
ERGIC1-213ENST00000523366 NACADO15069 1562 aa21.12■□□□□ 0.97
ERGIC1-213ENST00000523366 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
ERGIC1-213ENST00000523366 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
ERGIC1-213ENST00000523366 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
ERGIC1-213ENST00000523366 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
ERGIC1-213ENST00000523366 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
ERGIC1-213ENST00000523366 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
ERGIC1-213ENST00000523366 BICRAQ9NZM4 1560 aa20.61■□□□□ 0.89
ERGIC1-213ENST00000523366 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
ERGIC1-213ENST00000523366 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
ERGIC1-213ENST00000523366 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
ERGIC1-213ENST00000523366 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
ERGIC1-213ENST00000523366 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
ERGIC1-213ENST00000523366 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
ERGIC1-213ENST00000523366 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
ERGIC1-213ENST00000523366 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
ERGIC1-213ENST00000523366 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
ERGIC1-213ENST00000523366 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
ERGIC1-213ENST00000523366 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
ERGIC1-213ENST00000523366 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
ERGIC1-213ENST00000523366 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
ERGIC1-213ENST00000523366 HMGXB3Q12766 1538 aa19.39■□□□□ 0.69
ERGIC1-213ENST00000523366 WIZO95785 1651 aa19.33■□□□□ 0.69
ERGIC1-213ENST00000523366 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.68
ERGIC1-213ENST00000523366 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
ERGIC1-213ENST00000523366 NESP48681 1621 aa19.11■□□□□ 0.65
ERGIC1-213ENST00000523366 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
ERGIC1-213ENST00000523366 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
ERGIC1-213ENST00000523366 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
ERGIC1-213ENST00000523366 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
ERGIC1-213ENST00000523366 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
ERGIC1-213ENST00000523366 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
ERGIC1-213ENST00000523366 CFTRP13569 1480 aa18.83■□□□□ 0.6
ERGIC1-213ENST00000523366 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
ERGIC1-213ENST00000523366 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
ERGIC1-213ENST00000523366 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
ERGIC1-213ENST00000523366 CUX2O14529 1486 aa18.74■□□□□ 0.59
ERGIC1-213ENST00000523366 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
ERGIC1-213ENST00000523366 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
ERGIC1-213ENST00000523366 CEP164Q9UPV0 1460 aa18.67■□□□□ 0.58
ERGIC1-213ENST00000523366 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
ERGIC1-213ENST00000523366 WDR62O43379 1518 aa18.61■□□□□ 0.57
ERGIC1-213ENST00000523366 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
ERGIC1-213ENST00000523366 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
ERGIC1-213ENST00000523366 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
ERGIC1-213ENST00000523366 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
ERGIC1-213ENST00000523366 CUX1P39880 1505 aa18.32■□□□□ 0.52
ERGIC1-213ENST00000523366 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
ERGIC1-213ENST00000523366 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
ERGIC1-213ENST00000523366 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
ERGIC1-213ENST00000523366 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
ERGIC1-213ENST00000523366 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
ERGIC1-213ENST00000523366 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
ERGIC1-213ENST00000523366 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
ERGIC1-213ENST00000523366 SOGA1O94964 1423 aa18.19■□□□□ 0.5
ERGIC1-213ENST00000523366 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5
ERGIC1-213ENST00000523366 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
ERGIC1-213ENST00000523366 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
ERGIC1-213ENST00000523366 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
ERGIC1-213ENST00000523366 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
ERGIC1-213ENST00000523366 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
ERGIC1-213ENST00000523366 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
ERGIC1-213ENST00000523366 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
ERGIC1-213ENST00000523366 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
ERGIC1-213ENST00000523366 ABCA5Q8WWZ7 1642 aa17.99■□□□□ 0.47
ERGIC1-213ENST00000523366 CHD1O14646 1710 aa17.99■□□□□ 0.47
ERGIC1-213ENST00000523366 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
ERGIC1-213ENST00000523366 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
ERGIC1-213ENST00000523366 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
ERGIC1-213ENST00000523366 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
ERGIC1-213ENST00000523366 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
ERGIC1-213ENST00000523366 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
ERGIC1-213ENST00000523366 FBLN2P98095 1184 aa17.88■□□□□ 0.45
ERGIC1-213ENST00000523366 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
ERGIC1-213ENST00000523366 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
ERGIC1-213ENST00000523366 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
ERGIC1-213ENST00000523366 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
ERGIC1-213ENST00000523366 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
ERGIC1-213ENST00000523366 FHAD1B1AJZ9 1412 aa17.75■□□□□ 0.43
ERGIC1-213ENST00000523366 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
ERGIC1-213ENST00000523366 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
ERGIC1-213ENST00000523366 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
ERGIC1-213ENST00000523366 IGF1RP08069 1367 aa17.74■□□□□ 0.43
ERGIC1-213ENST00000523366 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
ERGIC1-213ENST00000523366 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
ERGIC1-213ENST00000523366 ARHGEF11O15085 1522 aa17.72■□□□□ 0.43
ERGIC1-213ENST00000523366 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
ERGIC1-213ENST00000523366 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
ERGIC1-213ENST00000523366 CEP170Q5SW79 1584 aa17.69■□□□□ 0.42
ERGIC1-213ENST00000523366 NUP160Q12769 1436 aa17.67■□□□□ 0.42
ERGIC1-213ENST00000523366 CUL7Q14999 1698 aa17.64■□□□□ 0.41
ERGIC1-213ENST00000523366 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
ERGIC1-213ENST00000523366 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
ERGIC1-213ENST00000523366 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
ERGIC1-213ENST00000523366 SHROOM2Q13796 1616 aa17.57■□□□□ 0.4
ERGIC1-213ENST00000523366 CYB5RLQ6IPT4 315 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms