RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
VEGFA-223ENST00000523125 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-223ENST00000523125 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
VEGFA-223ENST00000523125 KIAA0586Q9BVV6 1533 aa21.35■■□□□ 1.01
VEGFA-223ENST00000523125 IQGAP2Q13576 1575 aa21.2■□□□□ 0.98
VEGFA-223ENST00000523125 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
VEGFA-223ENST00000523125 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
VEGFA-223ENST00000523125 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
VEGFA-223ENST00000523125 CARMIL2Q6F5E8 1435 aa21.1■□□□□ 0.97
VEGFA-223ENST00000523125 DISP1Q96F81 1524 aa21.09■□□□□ 0.97
VEGFA-223ENST00000523125 CTTNBP2Q8WZ74 1663 aa21.09■□□□□ 0.97
VEGFA-223ENST00000523125 PTPRGP23470 1445 aa21.09■□□□□ 0.97
VEGFA-223ENST00000523125 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
VEGFA-223ENST00000523125 UGGT2Q9NYU1 1516 aa21.08■□□□□ 0.96
VEGFA-223ENST00000523125 TNIKQ9UKE5 1360 aa21.07■□□□□ 0.96
VEGFA-223ENST00000523125 PRXQ9BXM0 1461 aa21.07■□□□□ 0.96
VEGFA-223ENST00000523125 NPM1P06748 294 aaKnown RBP eCLIP21.05■□□□□ 0.96
VEGFA-223ENST00000523125 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
VEGFA-223ENST00000523125 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
VEGFA-223ENST00000523125 KIAA0556O60303 1618 aa21.01■□□□□ 0.95
VEGFA-223ENST00000523125 DIP2BQ9P265 1576 aa21■□□□□ 0.95
VEGFA-223ENST00000523125 UHRF1BP1LA0JNW5 1464 aa20.97■□□□□ 0.95
VEGFA-223ENST00000523125 ABCC2Q92887 1545 aa20.97■□□□□ 0.95
VEGFA-223ENST00000523125 FAM69CQ0P6D2 419 aa20.95■□□□□ 0.94
VEGFA-223ENST00000523125 UACAQ9BZF9 1416 aa20.95■□□□□ 0.94
VEGFA-223ENST00000523125 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
VEGFA-223ENST00000523125 TSPOAP1O95153 1857 aa20.9■□□□□ 0.94
VEGFA-223ENST00000523125 KDM5BQ9UGL1 1544 aa20.88■□□□□ 0.93
VEGFA-223ENST00000523125 GOLGA3Q08378 1498 aa20.88■□□□□ 0.93
VEGFA-223ENST00000523125 ZCCHC11Q5TAX3 1644 aaKnown RBP20.87■□□□□ 0.93
VEGFA-223ENST00000523125 EEA1Q15075 1411 aa20.87■□□□□ 0.93
VEGFA-223ENST00000523125 ASXL2Q76L83 1435 aa20.87■□□□□ 0.93
VEGFA-223ENST00000523125 PLB1Q6P1J6 1458 aa20.84■□□□□ 0.93
VEGFA-223ENST00000523125 ABCA8O94911 1581 aa20.82■□□□□ 0.92
VEGFA-223ENST00000523125 GLI2P10070 1586 aa20.81■□□□□ 0.92
VEGFA-223ENST00000523125 PPRC1Q5VV67 1664 aaKnown RBP20.8■□□□□ 0.92
VEGFA-223ENST00000523125 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
VEGFA-223ENST00000523125 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
VEGFA-223ENST00000523125 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-223ENST00000523125 EPRSP07814 1512 aaKnown RBP20.75■□□□□ 0.91
VEGFA-223ENST00000523125 KIF21BO75037 1637 aa20.75■□□□□ 0.91
VEGFA-223ENST00000523125 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
VEGFA-223ENST00000523125 KDM6BO15054 1643 aa20.74■□□□□ 0.91
VEGFA-223ENST00000523125 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
VEGFA-223ENST00000523125 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
VEGFA-223ENST00000523125 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.89
VEGFA-223ENST00000523125 ATP10BO94823 1461 aa20.63■□□□□ 0.89
VEGFA-223ENST00000523125 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
VEGFA-223ENST00000523125 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-223ENST00000523125 FHOD3Q2V2M9 1422 aa20.59■□□□□ 0.89
VEGFA-223ENST00000523125 COL17A1Q9UMD9 1497 aaPredicted RBP20.58■□□□□ 0.89
VEGFA-223ENST00000523125 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
VEGFA-223ENST00000523125 TEX14Q8IWB6 1497 aa20.57■□□□□ 0.88
VEGFA-223ENST00000523125 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
VEGFA-223ENST00000523125 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
VEGFA-223ENST00000523125 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-223ENST00000523125 NUP153P49790 1475 aaKnown RBP20.55■□□□□ 0.88
VEGFA-223ENST00000523125 CD109Q6YHK3 1445 aa20.54■□□□□ 0.88
VEGFA-223ENST00000523125 MAGI3Q5TCQ9 1506 aa20.53■□□□□ 0.88
VEGFA-223ENST00000523125 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
VEGFA-223ENST00000523125 UBTFP17480 764 aaKnown RBP20.5■□□□□ 0.87
VEGFA-223ENST00000523125 ABCA9Q8IUA7 1624 aa20.49■□□□□ 0.87
VEGFA-223ENST00000523125 ARHGAP35Q9NRY4 1499 aa20.44■□□□□ 0.86
VEGFA-223ENST00000523125 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
VEGFA-223ENST00000523125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
VEGFA-223ENST00000523125 HNRNPUL2Q1KMD3 747 aaKnown RBP20.42■□□□□ 0.86
VEGFA-223ENST00000523125 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
VEGFA-223ENST00000523125 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
VEGFA-223ENST00000523125 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
VEGFA-223ENST00000523125 PLEKHD1A6NEE1 506 aa20.35■□□□□ 0.85
VEGFA-223ENST00000523125 LRRIQ1Q96JM4 1722 aa20.34■□□□□ 0.85
VEGFA-223ENST00000523125 HECW1Q76N89 1606 aa20.33■□□□□ 0.84
VEGFA-223ENST00000523125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.842e-6■■□□□ 12.9
VEGFA-223ENST00000523125 NEO1Q92859 1461 aa20.32■□□□□ 0.84
VEGFA-223ENST00000523125 PHLDB1Q86UU1 1377 aa20.32■□□□□ 0.84
VEGFA-223ENST00000523125 ADGRL1O94910 1474 aa20.31■□□□□ 0.84
VEGFA-223ENST00000523125 TTC37Q6PGP7 1564 aa20.31■□□□□ 0.84
VEGFA-223ENST00000523125 FRMPD1Q5SYB0 1578 aa20.27■□□□□ 0.84
VEGFA-223ENST00000523125 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-223ENST00000523125 RAPGEF3O95398 923 aa20.24■□□□□ 0.83
VEGFA-223ENST00000523125 RICTORQ6R327 1708 aa20.23■□□□□ 0.83
VEGFA-223ENST00000523125 CFAP74Q9C0B2 1584 aa20.23■□□□□ 0.83
VEGFA-223ENST00000523125 FANCAO15360 1455 aa20.22■□□□□ 0.83
VEGFA-223ENST00000523125 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
VEGFA-223ENST00000523125 KIF14Q15058 1648 aa20.21■□□□□ 0.83
VEGFA-223ENST00000523125 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
VEGFA-223ENST00000523125 MYO5CQ9NQX4 1742 aa20.2■□□□□ 0.82
VEGFA-223ENST00000523125 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
VEGFA-223ENST00000523125 PLCH2O75038 1416 aa20.18■□□□□ 0.82
VEGFA-223ENST00000523125 CDK11AQ9UQ88 783 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-223ENST00000523125 CLIP1P30622 1438 aa20.17■□□□□ 0.82
VEGFA-223ENST00000523125 TROQ12816 1431 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-223ENST00000523125 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-223ENST00000523125 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
VEGFA-223ENST00000523125 FYCO1Q9BQS8 1478 aa20.12■□□□□ 0.81
VEGFA-223ENST00000523125 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
VEGFA-223ENST00000523125 CDC42BPBQ9Y5S2 1711 aa20.11■□□□□ 0.81
VEGFA-223ENST00000523125 ARHGEF40Q8TER5 1519 aa20.11■□□□□ 0.81
VEGFA-223ENST00000523125 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
VEGFA-223ENST00000523125 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms