RNA–Protein interactions for RNA: ENST00000523094.5

CLINT1-206, Transcript of clathrin interactor 1, humanhuman

TSL 2 BASIC

Gene CLINT1, Length 3,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-206ENST00000523094 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
CLINT1-206ENST00000523094 DDX10Q13206 875 aaKnown RBP17.6■□□□□ 0.41
CLINT1-206ENST00000523094 MAP3K1Q13233 1512 aa17.58■□□□□ 0.41
CLINT1-206ENST00000523094 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
CLINT1-206ENST00000523094 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
CLINT1-206ENST00000523094 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
CLINT1-206ENST00000523094 LRRC9Q6ZRR7 1453 aa17.53■□□□□ 0.4
CLINT1-206ENST00000523094 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
CLINT1-206ENST00000523094 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.39
CLINT1-206ENST00000523094 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
CLINT1-206ENST00000523094 CFTRP13569 1480 aa17.5■□□□□ 0.39
CLINT1-206ENST00000523094 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
CLINT1-206ENST00000523094 FAM50AQ14320 339 aaKnown RBP17.48■□□□□ 0.39
CLINT1-206ENST00000523094 IGF1RP08069 1367 aa17.48■□□□□ 0.39
CLINT1-206ENST00000523094 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
CLINT1-206ENST00000523094 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
CLINT1-206ENST00000523094 ANP32CO43423 234 aa17.44■□□□□ 0.38
CLINT1-206ENST00000523094 HIRIP3Q9BW71 556 aaPredicted RBP17.44■□□□□ 0.38
CLINT1-206ENST00000523094 CFAP43Q8NDM7 1665 aa17.44■□□□□ 0.38
CLINT1-206ENST00000523094 TRIM52Q96A61 297 aa17.44■□□□□ 0.38
CLINT1-206ENST00000523094 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
CLINT1-206ENST00000523094 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
CLINT1-206ENST00000523094 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
CLINT1-206ENST00000523094 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.38
CLINT1-206ENST00000523094 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
CLINT1-206ENST00000523094 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
CLINT1-206ENST00000523094 POLR3GLQ9BT43 218 aa17.36■□□□□ 0.37
CLINT1-206ENST00000523094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
CLINT1-206ENST00000523094 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
CLINT1-206ENST00000523094 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
CLINT1-206ENST00000523094 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
CLINT1-206ENST00000523094 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
CLINT1-206ENST00000523094 FHOD3Q2V2M9 1422 aa17.28■□□□□ 0.36
CLINT1-206ENST00000523094 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
CLINT1-206ENST00000523094 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
CLINT1-206ENST00000523094 MSH5O43196 834 aa17.25■□□□□ 0.35
CLINT1-206ENST00000523094 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
CLINT1-206ENST00000523094 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■■■□ 25
CLINT1-206ENST00000523094 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
CLINT1-206ENST00000523094 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
CLINT1-206ENST00000523094 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
CLINT1-206ENST00000523094 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLINT1-206ENST00000523094 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
CLINT1-206ENST00000523094 PTPN23Q9H3S7 1636 aa17.2■□□□□ 0.34
CLINT1-206ENST00000523094 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
CLINT1-206ENST00000523094 PTPRKQ15262 1439 aa17.19■□□□□ 0.34
CLINT1-206ENST00000523094 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
CLINT1-206ENST00000523094 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
CLINT1-206ENST00000523094 KDM5BQ9UGL1 1544 aa17.17■□□□□ 0.34
CLINT1-206ENST00000523094 NAIPQ13075 1403 aa17.14■□□□□ 0.33
CLINT1-206ENST00000523094 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
CLINT1-206ENST00000523094 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
CLINT1-206ENST00000523094 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
CLINT1-206ENST00000523094 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
CLINT1-206ENST00000523094 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
CLINT1-206ENST00000523094 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
CLINT1-206ENST00000523094 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
CLINT1-206ENST00000523094 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
CLINT1-206ENST00000523094 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
CLINT1-206ENST00000523094 CUL7Q14999 1698 aa17.09■□□□□ 0.33
CLINT1-206ENST00000523094 ERCC6Q03468 1493 aa17.08■□□□□ 0.33
CLINT1-206ENST00000523094 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.33
CLINT1-206ENST00000523094 NCOA2Q15596 1464 aa17.08■□□□□ 0.32
CLINT1-206ENST00000523094 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
CLINT1-206ENST00000523094 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
CLINT1-206ENST00000523094 PPP4R2Q9NY27 417 aa17.07■□□□□ 0.32
CLINT1-206ENST00000523094 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
CLINT1-206ENST00000523094 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
CLINT1-206ENST00000523094 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
CLINT1-206ENST00000523094 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
CLINT1-206ENST00000523094 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
CLINT1-206ENST00000523094 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLINT1-206ENST00000523094 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
CLINT1-206ENST00000523094 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
CLINT1-206ENST00000523094 SAMD9Q5K651 1589 aa17.01■□□□□ 0.31
CLINT1-206ENST00000523094 EHBP1L1Q8N3D4 1523 aa17■□□□□ 0.31
CLINT1-206ENST00000523094 TOPBP1Q92547 1522 aa17■□□□□ 0.31
CLINT1-206ENST00000523094 NBR1Q14596 966 aa17■□□□□ 0.31
CLINT1-206ENST00000523094 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
CLINT1-206ENST00000523094 HECW1Q76N89 1606 aa17■□□□□ 0.31
CLINT1-206ENST00000523094 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
CLINT1-206ENST00000523094 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
CLINT1-206ENST00000523094 UGGT2Q9NYU1 1516 aa16.98■□□□□ 0.31
CLINT1-206ENST00000523094 GCC2Q8IWJ2 1684 aa16.98■□□□□ 0.31
CLINT1-206ENST00000523094 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
CLINT1-206ENST00000523094 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
CLINT1-206ENST00000523094 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
CLINT1-206ENST00000523094 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
CLINT1-206ENST00000523094 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
CLINT1-206ENST00000523094 NCOA1Q15788 1441 aa16.96■□□□□ 0.3
CLINT1-206ENST00000523094 ZBED9Q6R2W3 1325 aa16.95■□□□□ 0.3
CLINT1-206ENST00000523094 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
CLINT1-206ENST00000523094 CCDC7Q96M83 1385 aa16.95■□□□□ 0.3
CLINT1-206ENST00000523094 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
CLINT1-206ENST00000523094 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
CLINT1-206ENST00000523094 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
CLINT1-206ENST00000523094 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
CLINT1-206ENST00000523094 KDM6BO15054 1643 aa16.94■□□□□ 0.3
CLINT1-206ENST00000523094 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
CLINT1-206ENST00000523094 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms