RNA–Protein interactions for RNA: ENST00000523094.5

CLINT1-206, Transcript of clathrin interactor 1, humanhuman

TSL 2 BASIC

Gene CLINT1, Length 3,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-206ENST00000523094 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
CLINT1-206ENST00000523094 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
CLINT1-206ENST00000523094 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
CLINT1-206ENST00000523094 ZCCHC6Q5VYS8 1495 aaKnown RBP20.76■□□□□ 0.91
CLINT1-206ENST00000523094 HRCP23327 699 aa20.7■□□□□ 0.9
CLINT1-206ENST00000523094 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
CLINT1-206ENST00000523094 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
CLINT1-206ENST00000523094 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
CLINT1-206ENST00000523094 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
CLINT1-206ENST00000523094 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
CLINT1-206ENST00000523094 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
CLINT1-206ENST00000523094 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
CLINT1-206ENST00000523094 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.8
CLINT1-206ENST00000523094 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
CLINT1-206ENST00000523094 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
CLINT1-206ENST00000523094 ABCC9O60706 1549 aa19.68■□□□□ 0.74
CLINT1-206ENST00000523094 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
CLINT1-206ENST00000523094 RSF1Q96T23 1441 aaPredicted RBP19.52■□□□□ 0.71
CLINT1-206ENST00000523094 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
CLINT1-206ENST00000523094 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
CLINT1-206ENST00000523094 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
CLINT1-206ENST00000523094 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
CLINT1-206ENST00000523094 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
CLINT1-206ENST00000523094 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
CLINT1-206ENST00000523094 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
CLINT1-206ENST00000523094 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
CLINT1-206ENST00000523094 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
CLINT1-206ENST00000523094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
CLINT1-206ENST00000523094 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
CLINT1-206ENST00000523094 CCER1Q8TC90 406 aaPredicted RBP19.01■□□□□ 0.63
CLINT1-206ENST00000523094 WIZO95785 1651 aa18.97■□□□□ 0.63
CLINT1-206ENST00000523094 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
CLINT1-206ENST00000523094 NACADO15069 1562 aa18.91■□□□□ 0.62
CLINT1-206ENST00000523094 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
CLINT1-206ENST00000523094 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
CLINT1-206ENST00000523094 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
CLINT1-206ENST00000523094 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.6
CLINT1-206ENST00000523094 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
CLINT1-206ENST00000523094 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
CLINT1-206ENST00000523094 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
CLINT1-206ENST00000523094 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
CLINT1-206ENST00000523094 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
CLINT1-206ENST00000523094 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
CLINT1-206ENST00000523094 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
CLINT1-206ENST00000523094 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
CLINT1-206ENST00000523094 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
CLINT1-206ENST00000523094 SOGA1O94964 1423 aa18.61■□□□□ 0.57
CLINT1-206ENST00000523094 MYT1Q01538 1121 aa18.59■□□□□ 0.57
CLINT1-206ENST00000523094 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
CLINT1-206ENST00000523094 EEA1Q15075 1411 aa18.55■□□□□ 0.56
CLINT1-206ENST00000523094 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
CLINT1-206ENST00000523094 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
CLINT1-206ENST00000523094 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
CLINT1-206ENST00000523094 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
CLINT1-206ENST00000523094 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
CLINT1-206ENST00000523094 GOLGA3Q08378 1498 aa18.47■□□□□ 0.55
CLINT1-206ENST00000523094 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
CLINT1-206ENST00000523094 MIER1Q8N108 512 aa18.42■□□□□ 0.54
CLINT1-206ENST00000523094 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
CLINT1-206ENST00000523094 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
CLINT1-206ENST00000523094 KIF21BO75037 1637 aa18.3■□□□□ 0.52
CLINT1-206ENST00000523094 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
CLINT1-206ENST00000523094 CLIP1P30622 1438 aa18.28■□□□□ 0.52
CLINT1-206ENST00000523094 APLP2Q06481 763 aa18.27■□□□□ 0.52
CLINT1-206ENST00000523094 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
CLINT1-206ENST00000523094 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
CLINT1-206ENST00000523094 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
CLINT1-206ENST00000523094 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
CLINT1-206ENST00000523094 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
CLINT1-206ENST00000523094 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
CLINT1-206ENST00000523094 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
CLINT1-206ENST00000523094 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
CLINT1-206ENST00000523094 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.47
CLINT1-206ENST00000523094 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
CLINT1-206ENST00000523094 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
CLINT1-206ENST00000523094 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
CLINT1-206ENST00000523094 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
CLINT1-206ENST00000523094 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
CLINT1-206ENST00000523094 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
CLINT1-206ENST00000523094 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
CLINT1-206ENST00000523094 PRXQ9BXM0 1461 aa17.89■□□□□ 0.45
CLINT1-206ENST00000523094 BCANQ96GW7 911 aa17.88■□□□□ 0.45
CLINT1-206ENST00000523094 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
CLINT1-206ENST00000523094 ITGAEP38570 1179 aa17.88■□□□□ 0.45
CLINT1-206ENST00000523094 CUX2O14529 1486 aa17.86■□□□□ 0.45
CLINT1-206ENST00000523094 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
CLINT1-206ENST00000523094 NEFLP07196 543 aa17.82■□□□□ 0.44
CLINT1-206ENST00000523094 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
CLINT1-206ENST00000523094 ATP1B4Q9UN42 357 aaPredicted RBP17.79■□□□□ 0.44
CLINT1-206ENST00000523094 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
CLINT1-206ENST00000523094 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
CLINT1-206ENST00000523094 MAPKBP1O60336 1514 aa17.71■□□□□ 0.43
CLINT1-206ENST00000523094 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
CLINT1-206ENST00000523094 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
CLINT1-206ENST00000523094 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
CLINT1-206ENST00000523094 CUX1P39880 1505 aa17.7■□□□□ 0.42
CLINT1-206ENST00000523094 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
CLINT1-206ENST00000523094 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
CLINT1-206ENST00000523094 FKBP8Q14318 412 aa17.61■□□□□ 0.41
CLINT1-206ENST00000523094 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms