RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
CD74-208ENST00000522246 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
CD74-208ENST00000522246 NUP160Q12769 1436 aa16.82■□□□□ 0.28
CD74-208ENST00000522246 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
CD74-208ENST00000522246 IQGAP2Q13576 1575 aa16.77■□□□□ 0.28
CD74-208ENST00000522246 CHD1O14646 1710 aa16.77■□□□□ 0.28
CD74-208ENST00000522246 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
CD74-208ENST00000522246 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
CD74-208ENST00000522246 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
CD74-208ENST00000522246 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
CD74-208ENST00000522246 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
CD74-208ENST00000522246 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
CD74-208ENST00000522246 CARMIL2Q6F5E8 1435 aa16.68■□□□□ 0.26
CD74-208ENST00000522246 SAMD9Q5K651 1589 aa16.67■□□□□ 0.26
CD74-208ENST00000522246 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
CD74-208ENST00000522246 VPS8Q8N3P4 1428 aa16.66■□□□□ 0.26
CD74-208ENST00000522246 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
CD74-208ENST00000522246 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
CD74-208ENST00000522246 CLASP1Q7Z460 1538 aa16.62■□□□□ 0.25
CD74-208ENST00000522246 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
CD74-208ENST00000522246 APLP2Q06481 763 aa16.61■□□□□ 0.25
CD74-208ENST00000522246 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
CD74-208ENST00000522246 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
CD74-208ENST00000522246 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
CD74-208ENST00000522246 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
CD74-208ENST00000522246 CASKIN1Q8WXD9 1431 aa16.54■□□□□ 0.24
CD74-208ENST00000522246 PTPRGP23470 1445 aa16.51■□□□□ 0.23
CD74-208ENST00000522246 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
CD74-208ENST00000522246 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
CD74-208ENST00000522246 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
CD74-208ENST00000522246 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
CD74-208ENST00000522246 PCF11O94913 1555 aaKnown RBP16.43■□□□□ 0.22
CD74-208ENST00000522246 HECW1Q76N89 1606 aa16.42■□□□□ 0.22
CD74-208ENST00000522246 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
CD74-208ENST00000522246 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
CD74-208ENST00000522246 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
CD74-208ENST00000522246 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
CD74-208ENST00000522246 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
CD74-208ENST00000522246 ABCA8O94911 1581 aa16.38■□□□□ 0.21
CD74-208ENST00000522246 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
CD74-208ENST00000522246 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
CD74-208ENST00000522246 EPRSP07814 1512 aaKnown RBP16.36■□□□□ 0.21
CD74-208ENST00000522246 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
CD74-208ENST00000522246 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
CD74-208ENST00000522246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
CD74-208ENST00000522246 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
CD74-208ENST00000522246 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
CD74-208ENST00000522246 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
CD74-208ENST00000522246 LRRC9Q6ZRR7 1453 aa16.33■□□□□ 0.2
CD74-208ENST00000522246 CFAP43Q8NDM7 1665 aa16.33■□□□□ 0.2
CD74-208ENST00000522246 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
CD74-208ENST00000522246 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
CD74-208ENST00000522246 ABCC2Q92887 1545 aa16.32■□□□□ 0.2
CD74-208ENST00000522246 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
CD74-208ENST00000522246 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
CD74-208ENST00000522246 ATP10BO94823 1461 aa16.29■□□□□ 0.2
CD74-208ENST00000522246 LRRIQ1Q96JM4 1722 aa16.28■□□□□ 0.2
CD74-208ENST00000522246 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
CD74-208ENST00000522246 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
CD74-208ENST00000522246 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
CD74-208ENST00000522246 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
CD74-208ENST00000522246 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
CD74-208ENST00000522246 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
CD74-208ENST00000522246 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
CD74-208ENST00000522246 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
CD74-208ENST00000522246 TROQ12816 1431 aaPredicted RBP16.23■□□□□ 0.19
CD74-208ENST00000522246 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
CD74-208ENST00000522246 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
CD74-208ENST00000522246 ADCY10Q96PN6 1610 aa16.19■□□□□ 0.18
CD74-208ENST00000522246 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
CD74-208ENST00000522246 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
CD74-208ENST00000522246 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
CD74-208ENST00000522246 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
CD74-208ENST00000522246 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
CD74-208ENST00000522246 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
CD74-208ENST00000522246 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
CD74-208ENST00000522246 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
CD74-208ENST00000522246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.17
CD74-208ENST00000522246 KIF14Q15058 1648 aa16.1■□□□□ 0.17
CD74-208ENST00000522246 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
CD74-208ENST00000522246 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
CD74-208ENST00000522246 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
CD74-208ENST00000522246 ASXL2Q76L83 1435 aa16.09■□□□□ 0.17
CD74-208ENST00000522246 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
CD74-208ENST00000522246 FGD6Q6ZV73 1430 aa16.07■□□□□ 0.16
CD74-208ENST00000522246 ABCC10Q5T3U5 1492 aa16.06■□□□□ 0.16
CD74-208ENST00000522246 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
CD74-208ENST00000522246 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
CD74-208ENST00000522246 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
CD74-208ENST00000522246 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
CD74-208ENST00000522246 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
CD74-208ENST00000522246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16■□□□□ 0.15
CD74-208ENST00000522246 TCOF1Q13428 1488 aaKnown RBP16■□□□□ 0.15
CD74-208ENST00000522246 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
CD74-208ENST00000522246 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
CD74-208ENST00000522246 PLCH2O75038 1416 aa15.99■□□□□ 0.15
CD74-208ENST00000522246 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
CD74-208ENST00000522246 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
CD74-208ENST00000522246 ARAP3Q8WWN8 1544 aa15.97■□□□□ 0.15
CD74-208ENST00000522246 ZNF777Q9ULD5 760 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms