RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 NISCHQ9Y2I1 1504 aa24.46■■□□□ 1.51
CD74-208ENST00000522246 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
CD74-208ENST00000522246 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
CD74-208ENST00000522246 ABCC9O60706 1549 aa20.45■□□□□ 0.86
CD74-208ENST00000522246 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
CD74-208ENST00000522246 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
CD74-208ENST00000522246 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
CD74-208ENST00000522246 NACADO15069 1562 aa20.11■□□□□ 0.81
CD74-208ENST00000522246 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
CD74-208ENST00000522246 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
CD74-208ENST00000522246 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
CD74-208ENST00000522246 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
CD74-208ENST00000522246 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
CD74-208ENST00000522246 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
CD74-208ENST00000522246 CECR2Q9BXF3 1484 aa18.95■□□□□ 0.62
CD74-208ENST00000522246 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
CD74-208ENST00000522246 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
CD74-208ENST00000522246 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
CD74-208ENST00000522246 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
CD74-208ENST00000522246 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
CD74-208ENST00000522246 EIF4G1Q04637 1599 aaKnown RBP18.75■□□□□ 0.59
CD74-208ENST00000522246 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
CD74-208ENST00000522246 SMARCA2P51531 1590 aa18.64■□□□□ 0.58
CD74-208ENST00000522246 WIZO95785 1651 aa18.63■□□□□ 0.57
CD74-208ENST00000522246 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
CD74-208ENST00000522246 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
CD74-208ENST00000522246 CC2D2AQ9P2K1 1620 aa18.52■□□□□ 0.56
CD74-208ENST00000522246 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
CD74-208ENST00000522246 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
CD74-208ENST00000522246 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
CD74-208ENST00000522246 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
CD74-208ENST00000522246 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
CD74-208ENST00000522246 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
CD74-208ENST00000522246 CFTRP13569 1480 aa18.04■□□□□ 0.48
CD74-208ENST00000522246 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
CD74-208ENST00000522246 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
CD74-208ENST00000522246 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
CD74-208ENST00000522246 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
CD74-208ENST00000522246 NESP48681 1621 aa17.84■□□□□ 0.45
CD74-208ENST00000522246 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
CD74-208ENST00000522246 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
CD74-208ENST00000522246 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
CD74-208ENST00000522246 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
CD74-208ENST00000522246 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
CD74-208ENST00000522246 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
CD74-208ENST00000522246 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
CD74-208ENST00000522246 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
CD74-208ENST00000522246 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
CD74-208ENST00000522246 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
CD74-208ENST00000522246 CUX1P39880 1505 aa17.62■□□□□ 0.41
CD74-208ENST00000522246 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
CD74-208ENST00000522246 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
CD74-208ENST00000522246 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
CD74-208ENST00000522246 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
CD74-208ENST00000522246 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
CD74-208ENST00000522246 EEA1Q15075 1411 aa17.47■□□□□ 0.39
CD74-208ENST00000522246 WDR62O43379 1518 aa17.47■□□□□ 0.39
CD74-208ENST00000522246 SOGA1O94964 1423 aa17.46■□□□□ 0.39
CD74-208ENST00000522246 POLA1P09884 1462 aaPredicted RBP17.45■□□□□ 0.38
CD74-208ENST00000522246 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
CD74-208ENST00000522246 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
CD74-208ENST00000522246 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
CD74-208ENST00000522246 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
CD74-208ENST00000522246 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
CD74-208ENST00000522246 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
CD74-208ENST00000522246 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
CD74-208ENST00000522246 CUX2O14529 1486 aa17.35■□□□□ 0.37
CD74-208ENST00000522246 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
CD74-208ENST00000522246 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
CD74-208ENST00000522246 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
CD74-208ENST00000522246 IGF1RP08069 1367 aa17.26■□□□□ 0.35
CD74-208ENST00000522246 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
CD74-208ENST00000522246 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
CD74-208ENST00000522246 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
CD74-208ENST00000522246 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
CD74-208ENST00000522246 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
CD74-208ENST00000522246 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
CD74-208ENST00000522246 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
CD74-208ENST00000522246 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
CD74-208ENST00000522246 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
CD74-208ENST00000522246 KIF21BO75037 1637 aa17.16■□□□□ 0.34
CD74-208ENST00000522246 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
CD74-208ENST00000522246 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
CD74-208ENST00000522246 CUL7Q14999 1698 aa17.13■□□□□ 0.33
CD74-208ENST00000522246 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
CD74-208ENST00000522246 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
CD74-208ENST00000522246 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
CD74-208ENST00000522246 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
CD74-208ENST00000522246 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
CD74-208ENST00000522246 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
CD74-208ENST00000522246 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
CD74-208ENST00000522246 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
CD74-208ENST00000522246 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
CD74-208ENST00000522246 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
CD74-208ENST00000522246 ADAMTS12P58397 1594 aa16.99■□□□□ 0.31
CD74-208ENST00000522246 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
CD74-208ENST00000522246 FBLN2P98095 1184 aa16.93■□□□□ 0.3
CD74-208ENST00000522246 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
CD74-208ENST00000522246 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
CD74-208ENST00000522246 CLIP1P30622 1438 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms