RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
SPIDR-213ENST00000521214 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
SPIDR-213ENST00000521214 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
SPIDR-213ENST00000521214 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-213ENST00000521214 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
SPIDR-213ENST00000521214 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
SPIDR-213ENST00000521214 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
SPIDR-213ENST00000521214 PRXQ9BXM0 1461 aa11.88□□□□□ -0.51
SPIDR-213ENST00000521214 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
SPIDR-213ENST00000521214 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
SPIDR-213ENST00000521214 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
SPIDR-213ENST00000521214 KIF21BO75037 1637 aa11.81□□□□□ -0.52
SPIDR-213ENST00000521214 VPS8Q8N3P4 1428 aa11.8□□□□□ -0.52
SPIDR-213ENST00000521214 SNAPC4Q5SXM2 1469 aa11.79□□□□□ -0.52
SPIDR-213ENST00000521214 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
SPIDR-213ENST00000521214 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-213ENST00000521214 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
SPIDR-213ENST00000521214 JPH4Q96JJ6 628 aa11.74□□□□□ -0.53
SPIDR-213ENST00000521214 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
SPIDR-213ENST00000521214 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
SPIDR-213ENST00000521214 IFT140Q96RY7 1462 aa11.71□□□□□ -0.53
SPIDR-213ENST00000521214 YTHDC1Q96MU7 727 aaKnown RBP11.71□□□□□ -0.54
SPIDR-213ENST00000521214 MTUS2Q5JR59 1369 aa11.71□□□□□ -0.54
SPIDR-213ENST00000521214 ERICH3Q5RHP9 1530 aa11.7□□□□□ -0.54
SPIDR-213ENST00000521214 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
SPIDR-213ENST00000521214 FHAD1B1AJZ9 1412 aa11.68□□□□□ -0.54
SPIDR-213ENST00000521214 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
SPIDR-213ENST00000521214 ANP32EQ9BTT0 268 aa11.66□□□□□ -0.54
SPIDR-213ENST00000521214 WDR62O43379 1518 aa11.66□□□□□ -0.54
SPIDR-213ENST00000521214 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
SPIDR-213ENST00000521214 THOC2Q8NI27 1593 aaKnown RBP11.64□□□□□ -0.55
SPIDR-213ENST00000521214 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
SPIDR-213ENST00000521214 ABCA5Q8WWZ7 1642 aa11.63□□□□□ -0.55
SPIDR-213ENST00000521214 ZNF644Q9H582 1327 aaPredicted RBP11.61□□□□□ -0.55
SPIDR-213ENST00000521214 PHLDB1Q86UU1 1377 aa11.6□□□□□ -0.55
SPIDR-213ENST00000521214 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
SPIDR-213ENST00000521214 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
SPIDR-213ENST00000521214 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
SPIDR-213ENST00000521214 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
SPIDR-213ENST00000521214 DIEXFQ68CQ4 756 aaKnown RBP11.58□□□□□ -0.56
SPIDR-213ENST00000521214 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.56
SPIDR-213ENST00000521214 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
SPIDR-213ENST00000521214 CUL7Q14999 1698 aa11.56□□□□□ -0.56
SPIDR-213ENST00000521214 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-213ENST00000521214 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
SPIDR-213ENST00000521214 ADAMTS12P58397 1594 aa11.56□□□□□ -0.56
SPIDR-213ENST00000521214 CCNB3Q8WWL7 1395 aa11.55□□□□□ -0.56
SPIDR-213ENST00000521214 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
SPIDR-213ENST00000521214 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
SPIDR-213ENST00000521214 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
SPIDR-213ENST00000521214 IQGAP2Q13576 1575 aa11.54□□□□□ -0.56
SPIDR-213ENST00000521214 FOXD1Q16676 465 aa11.54□□□□□ -0.56
SPIDR-213ENST00000521214 PLEKHD1A6NEE1 506 aa11.53□□□□□ -0.56
SPIDR-213ENST00000521214 SIN3AQ96ST3 1273 aa11.52□□□□□ -0.56
SPIDR-213ENST00000521214 HIRIP3Q9BW71 556 aaPredicted RBP11.52□□□□□ -0.56
SPIDR-213ENST00000521214 CFDP1Q9UEE9 299 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-213ENST00000521214 CDK11AQ9UQ88 783 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-213ENST00000521214 PTPRGP23470 1445 aa11.51□□□□□ -0.57
SPIDR-213ENST00000521214 LRRC9Q6ZRR7 1453 aa11.51□□□□□ -0.57
SPIDR-213ENST00000521214 SENP3Q9H4L4 574 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-213ENST00000521214 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
SPIDR-213ENST00000521214 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
SPIDR-213ENST00000521214 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
SPIDR-213ENST00000521214 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
SPIDR-213ENST00000521214 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
SPIDR-213ENST00000521214 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
SPIDR-213ENST00000521214 HNRNPMP52272 730 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■■■■□ 25.9
SPIDR-213ENST00000521214 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
SPIDR-213ENST00000521214 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
SPIDR-213ENST00000521214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■■■□□ 15.2
SPIDR-213ENST00000521214 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
SPIDR-213ENST00000521214 ERCC6L2Q5T890 1561 aa11.46□□□□□ -0.57
SPIDR-213ENST00000521214 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
SPIDR-213ENST00000521214 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
SPIDR-213ENST00000521214 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
SPIDR-213ENST00000521214 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
SPIDR-213ENST00000521214 EPRSP07814 1512 aaKnown RBP11.42□□□□□ -0.58
SPIDR-213ENST00000521214 CHD1O14646 1710 aa11.42□□□□□ -0.58
SPIDR-213ENST00000521214 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
SPIDR-213ENST00000521214 FYCO1Q9BQS8 1478 aa11.42□□□□□ -0.58
SPIDR-213ENST00000521214 EFCAB5A4FU69 1503 aa11.41□□□□□ -0.58
SPIDR-213ENST00000521214 MAGI3Q5TCQ9 1506 aa11.4□□□□□ -0.58
SPIDR-213ENST00000521214 PLPPR3Q6T4P5 718 aa11.4□□□□□ -0.58
SPIDR-213ENST00000521214 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
SPIDR-213ENST00000521214 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
SPIDR-213ENST00000521214 NUP160Q12769 1436 aa11.38□□□□□ -0.59
SPIDR-213ENST00000521214 FGD6Q6ZV73 1430 aa11.38□□□□□ -0.59
SPIDR-213ENST00000521214 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
SPIDR-213ENST00000521214 PTPRKQ15262 1439 aa11.36□□□□□ -0.59
SPIDR-213ENST00000521214 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
SPIDR-213ENST00000521214 SAMD9Q5K651 1589 aa11.35□□□□□ -0.59
SPIDR-213ENST00000521214 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
SPIDR-213ENST00000521214 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
SPIDR-213ENST00000521214 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
SPIDR-213ENST00000521214 UGGT2Q9NYU1 1516 aa11.33□□□□□ -0.6
SPIDR-213ENST00000521214 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
SPIDR-213ENST00000521214 AFAP1Q8N556 730 aa11.33□□□□□ -0.6
SPIDR-213ENST00000521214 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
SPIDR-213ENST00000521214 DHX57Q6P158 1386 aaKnown RBP11.33□□□□□ -0.6
SPIDR-213ENST00000521214 LRRIQ1Q96JM4 1722 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms