RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
TNPO1-212ENST00000520850 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
TNPO1-212ENST00000520850 EEA1Q15075 1411 aa27.36■■□□□ 1.97
TNPO1-212ENST00000520850 ARAP1Q96P48 1450 aa27.34■■□□□ 1.97
TNPO1-212ENST00000520850 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
TNPO1-212ENST00000520850 PRXQ9BXM0 1461 aa27.31■■□□□ 1.96
TNPO1-212ENST00000520850 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
TNPO1-212ENST00000520850 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
TNPO1-212ENST00000520850 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
TNPO1-212ENST00000520850 IQGAP2Q13576 1575 aa27.15■■□□□ 1.94
TNPO1-212ENST00000520850 CARMIL2Q6F5E8 1435 aa27.08■■□□□ 1.93
TNPO1-212ENST00000520850 UGGT2Q9NYU1 1516 aa27.07■■□□□ 1.92
TNPO1-212ENST00000520850 CTTNBP2Q8WZ74 1663 aa27.02■■□□□ 1.92
TNPO1-212ENST00000520850 FAM9AQ8IZU1 332 aaPredicted RBP27■■□□□ 1.91
TNPO1-212ENST00000520850 TNIKQ9UKE5 1360 aa26.99■■□□□ 1.91
TNPO1-212ENST00000520850 DISP1Q96F81 1524 aa26.99■■□□□ 1.91
TNPO1-212ENST00000520850 KIF21BO75037 1637 aa26.98■■□□□ 1.91
TNPO1-212ENST00000520850 PTPRGP23470 1445 aa26.96■■□□□ 1.91
TNPO1-212ENST00000520850 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
TNPO1-212ENST00000520850 KIAA0556O60303 1618 aa26.88■■□□□ 1.89
TNPO1-212ENST00000520850 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
TNPO1-212ENST00000520850 UHRF1BP1LA0JNW5 1464 aa26.81■■□□□ 1.88
TNPO1-212ENST00000520850 ADCY10Q96PN6 1610 aa26.79■■□□□ 1.88
TNPO1-212ENST00000520850 UACAQ9BZF9 1416 aa26.78■■□□□ 1.88
TNPO1-212ENST00000520850 SAMD9Q5K651 1589 aa26.74■■□□□ 1.87
TNPO1-212ENST00000520850 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
TNPO1-212ENST00000520850 TRHP20396 242 aaPredicted RBP26.73■■□□□ 1.87
TNPO1-212ENST00000520850 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
TNPO1-212ENST00000520850 ABCC2Q92887 1545 aa26.71■■□□□ 1.87
TNPO1-212ENST00000520850 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
TNPO1-212ENST00000520850 EFCAB5A4FU69 1503 aa26.65■■□□□ 1.86
TNPO1-212ENST00000520850 KDM5BQ9UGL1 1544 aa26.65■■□□□ 1.86
TNPO1-212ENST00000520850 ABCA8O94911 1581 aa26.63■■□□□ 1.85
TNPO1-212ENST00000520850 P3H3Q8IVL6 736 aa26.61■■□□□ 1.85
TNPO1-212ENST00000520850 PLB1Q6P1J6 1458 aa26.61■■□□□ 1.85
TNPO1-212ENST00000520850 ABCC10Q5T3U5 1492 aa26.58■■□□□ 1.85
TNPO1-212ENST00000520850 EHMT2Q96KQ7 1210 aa26.53■■□□□ 1.84
TNPO1-212ENST00000520850 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
TNPO1-212ENST00000520850 FHOD3Q2V2M9 1422 aa26.51■■□□□ 1.83
TNPO1-212ENST00000520850 ASXL2Q76L83 1435 aa26.51■■□□□ 1.83
TNPO1-212ENST00000520850 FAM69CQ0P6D2 419 aa26.49■■□□□ 1.83
TNPO1-212ENST00000520850 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
TNPO1-212ENST00000520850 ZCCHC11Q5TAX3 1644 aaKnown RBP26.48■■□□□ 1.83
TNPO1-212ENST00000520850 KIF13AQ9H1H9 1805 aa26.48■■□□□ 1.83
TNPO1-212ENST00000520850 DIP2BQ9P265 1576 aa26.46■■□□□ 1.83
TNPO1-212ENST00000520850 RAPGEF6Q8TEU7 1601 aa26.45■■□□□ 1.82
TNPO1-212ENST00000520850 FMN1Q68DA7 1419 aa26.44■■□□□ 1.82
TNPO1-212ENST00000520850 ATP10BO94823 1461 aa26.43■■□□□ 1.82
TNPO1-212ENST00000520850 GLI2P10070 1586 aa26.42■■□□□ 1.82
TNPO1-212ENST00000520850 WDR7Q9Y4E6 1490 aa26.38■■□□□ 1.81
TNPO1-212ENST00000520850 NUP153P49790 1475 aaKnown RBP26.37■■□□□ 1.81
TNPO1-212ENST00000520850 EPRSP07814 1512 aaKnown RBP26.37■■□□□ 1.81
TNPO1-212ENST00000520850 CLIP1P30622 1438 aa26.32■■□□□ 1.8
TNPO1-212ENST00000520850 PLEKHD1A6NEE1 506 aa26.24■■□□□ 1.79
TNPO1-212ENST00000520850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.24■■□□□ 1.79
TNPO1-212ENST00000520850 HNRNPUL2Q1KMD3 747 aaKnown RBP26.24■■□□□ 1.79
TNPO1-212ENST00000520850 ARID3CA6NKF2 412 aa26.23■■□□□ 1.79
TNPO1-212ENST00000520850 MAP3K4Q9Y6R4 1608 aa26.23■■□□□ 1.79
TNPO1-212ENST00000520850 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
TNPO1-212ENST00000520850 KCNH8Q96L42 1107 aa26.22■■□□□ 1.79
TNPO1-212ENST00000520850 CASKIN1Q8WXD9 1431 aa26.22■■□□□ 1.79
TNPO1-212ENST00000520850 HECW1Q76N89 1606 aa26.21■■□□□ 1.79
TNPO1-212ENST00000520850 CEP162Q5TB80 1403 aa26.19■■□□□ 1.78
TNPO1-212ENST00000520850 CDK11AQ9UQ88 783 aaPredicted RBP26.17■■□□□ 1.78
TNPO1-212ENST00000520850 CFAP43Q8NDM7 1665 aa26.17■■□□□ 1.78
TNPO1-212ENST00000520850 CD109Q6YHK3 1445 aa26.16■■□□□ 1.78
TNPO1-212ENST00000520850 MAGI3Q5TCQ9 1506 aa26.16■■□□□ 1.78
TNPO1-212ENST00000520850 TEX14Q8IWB6 1497 aa26.16■■□□□ 1.78
TNPO1-212ENST00000520850 PPRC1Q5VV67 1664 aaKnown RBP26.15■■□□□ 1.78
TNPO1-212ENST00000520850 TSPOAP1O95153 1857 aa26.14■■□□□ 1.78
TNPO1-212ENST00000520850 ATP1B4Q9UN42 357 aaPredicted RBP26.13■■□□□ 1.77
TNPO1-212ENST00000520850 FYCO1Q9BQS8 1478 aa26.12■■□□□ 1.77
TNPO1-212ENST00000520850 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
TNPO1-212ENST00000520850 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
TNPO1-212ENST00000520850 CDK13Q14004 1512 aaKnown RBP26.1■■□□□ 1.77
TNPO1-212ENST00000520850 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
TNPO1-212ENST00000520850 PHLDB1Q86UU1 1377 aa26.07■■□□□ 1.76
TNPO1-212ENST00000520850 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
TNPO1-212ENST00000520850 TROQ12816 1431 aaPredicted RBP26.02■■□□□ 1.76
TNPO1-212ENST00000520850 KDM6BO15054 1643 aa26.02■■□□□ 1.76
TNPO1-212ENST00000520850 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.99■■□□□ 1.75
TNPO1-212ENST00000520850 NEO1Q92859 1461 aa25.96■■□□□ 1.75
TNPO1-212ENST00000520850 ARAP3Q8WWN8 1544 aa25.94■■□□□ 1.74
TNPO1-212ENST00000520850 COL17A1Q9UMD9 1497 aaPredicted RBP25.94■■□□□ 1.74
TNPO1-212ENST00000520850 PLCH2O75038 1416 aa25.92■■□□□ 1.74
TNPO1-212ENST00000520850 VPS8Q8N3P4 1428 aa25.91■■□□□ 1.74
TNPO1-212ENST00000520850 KIF14Q15058 1648 aa25.9■■□□□ 1.74
TNPO1-212ENST00000520850 TTC37Q6PGP7 1564 aa25.88■■□□□ 1.73
TNPO1-212ENST00000520850 FANCAO15360 1455 aa25.84■■□□□ 1.73
TNPO1-212ENST00000520850 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.73
TNPO1-212ENST00000520850 AKNAQ7Z591 1439 aa25.82■■□□□ 1.72
TNPO1-212ENST00000520850 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
TNPO1-212ENST00000520850 MAP3K1Q13233 1512 aa25.8■■□□□ 1.72
TNPO1-212ENST00000520850 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
TNPO1-212ENST00000520850 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
TNPO1-212ENST00000520850 EHBP1L1Q8N3D4 1523 aa25.73■■□□□ 1.71
TNPO1-212ENST00000520850 DENND4BO75064 1496 aaPredicted RBP25.73■■□□□ 1.71
TNPO1-212ENST00000520850 TIAM1Q13009 1591 aa25.72■■□□□ 1.71
TNPO1-212ENST00000520850 RAPGEF3O95398 923 aa25.71■■□□□ 1.71
TNPO1-212ENST00000520850 GPATCH8Q9UKJ3 1502 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms