RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
TNPO1-212ENST00000520850 CCDC180Q9P1Z9 1646 aa35.14■■■■□ 3.22
TNPO1-212ENST00000520850 ABCC9O60706 1549 aa34.23■■■■□ 3.07
TNPO1-212ENST00000520850 NACADO15069 1562 aa33.09■■■□□ 2.89
TNPO1-212ENST00000520850 RB1CC1Q8TDY2 1594 aa33.05■■■□□ 2.88
TNPO1-212ENST00000520850 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
TNPO1-212ENST00000520850 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
TNPO1-212ENST00000520850 DCAF8L2P0C7V8 631 aa32.9■■■□□ 2.86
TNPO1-212ENST00000520850 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.85
TNPO1-212ENST00000520850 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
TNPO1-212ENST00000520850 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
TNPO1-212ENST00000520850 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.71
TNPO1-212ENST00000520850 SCRIBQ14160 1630 aa31.9■■■□□ 2.7
TNPO1-212ENST00000520850 SHROOM4Q9ULL8 1493 aa31.85■■■□□ 2.69
TNPO1-212ENST00000520850 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
TNPO1-212ENST00000520850 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
TNPO1-212ENST00000520850 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
TNPO1-212ENST00000520850 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.53
TNPO1-212ENST00000520850 BAZ1AQ9NRL2 1556 aaPredicted RBP30.64■■■□□ 2.5
TNPO1-212ENST00000520850 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
TNPO1-212ENST00000520850 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
TNPO1-212ENST00000520850 ATAD2BQ9ULI0 1458 aa30.5■■■□□ 2.47
TNPO1-212ENST00000520850 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
TNPO1-212ENST00000520850 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
TNPO1-212ENST00000520850 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
TNPO1-212ENST00000520850 HMGXB3Q12766 1538 aa30.35■■■□□ 2.45
TNPO1-212ENST00000520850 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
TNPO1-212ENST00000520850 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
TNPO1-212ENST00000520850 WIZO95785 1651 aa30.04■■■□□ 2.4
TNPO1-212ENST00000520850 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
TNPO1-212ENST00000520850 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
TNPO1-212ENST00000520850 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.33
TNPO1-212ENST00000520850 NESP48681 1621 aa29.63■■■□□ 2.33
TNPO1-212ENST00000520850 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
TNPO1-212ENST00000520850 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
TNPO1-212ENST00000520850 CFTRP13569 1480 aa29.46■■■□□ 2.31
TNPO1-212ENST00000520850 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.31
TNPO1-212ENST00000520850 CUX2O14529 1486 aa29.33■■■□□ 2.29
TNPO1-212ENST00000520850 KIF21AQ7Z4S6 1674 aa29.27■■■□□ 2.28
TNPO1-212ENST00000520850 SUPT5HO00267 1087 aaKnown RBP29.26■■■□□ 2.27
TNPO1-212ENST00000520850 FANCD2Q9BXW9 1451 aa29.22■■■□□ 2.27
TNPO1-212ENST00000520850 THOC2Q8NI27 1593 aaKnown RBP29.22■■■□□ 2.27
TNPO1-212ENST00000520850 CEP164Q9UPV0 1460 aa29.17■■■□□ 2.26
TNPO1-212ENST00000520850 PRDM2Q13029 1718 aa29.14■■■□□ 2.26
TNPO1-212ENST00000520850 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.26
TNPO1-212ENST00000520850 WDR62O43379 1518 aa29.06■■■□□ 2.24
TNPO1-212ENST00000520850 URB2Q14146 1524 aaKnown RBP28.9■■■□□ 2.22
TNPO1-212ENST00000520850 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
TNPO1-212ENST00000520850 TOPBP1Q92547 1522 aa28.75■■■□□ 2.19
TNPO1-212ENST00000520850 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
TNPO1-212ENST00000520850 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
TNPO1-212ENST00000520850 CUX1P39880 1505 aa28.52■■■□□ 2.16
TNPO1-212ENST00000520850 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
TNPO1-212ENST00000520850 TARBP1Q13395 1621 aaKnown RBP28.44■■■□□ 2.14
TNPO1-212ENST00000520850 SOGA1O94964 1423 aa28.43■■■□□ 2.14
TNPO1-212ENST00000520850 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
TNPO1-212ENST00000520850 FGD5Q6ZNL6 1462 aa28.41■■■□□ 2.14
TNPO1-212ENST00000520850 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.14
TNPO1-212ENST00000520850 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
TNPO1-212ENST00000520850 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
TNPO1-212ENST00000520850 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
TNPO1-212ENST00000520850 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
TNPO1-212ENST00000520850 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
TNPO1-212ENST00000520850 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
TNPO1-212ENST00000520850 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.112e-7■■■■■ 32.2
TNPO1-212ENST00000520850 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
TNPO1-212ENST00000520850 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
TNPO1-212ENST00000520850 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
TNPO1-212ENST00000520850 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
TNPO1-212ENST00000520850 GRIN2BQ13224 1484 aa28.09■■■□□ 2.09
TNPO1-212ENST00000520850 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
TNPO1-212ENST00000520850 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
TNPO1-212ENST00000520850 MAGI1Q96QZ7 1491 aaPredicted RBP28.04■■■□□ 2.08
TNPO1-212ENST00000520850 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
TNPO1-212ENST00000520850 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
TNPO1-212ENST00000520850 SYNJ2O15056 1496 aa27.91■■■□□ 2.06
TNPO1-212ENST00000520850 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
TNPO1-212ENST00000520850 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
TNPO1-212ENST00000520850 FBLN2P98095 1184 aa27.88■■■□□ 2.05
TNPO1-212ENST00000520850 CHD1O14646 1710 aa27.87■■■□□ 2.05
TNPO1-212ENST00000520850 KIF27Q86VH2 1401 aa27.83■■■□□ 2.05
TNPO1-212ENST00000520850 FHAD1B1AJZ9 1412 aa27.8■■■□□ 2.04
TNPO1-212ENST00000520850 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
TNPO1-212ENST00000520850 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
TNPO1-212ENST00000520850 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
TNPO1-212ENST00000520850 IGF1RP08069 1367 aa27.73■■■□□ 2.03
TNPO1-212ENST00000520850 GRIN2AQ12879 1464 aa27.7■■■□□ 2.03
TNPO1-212ENST00000520850 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
TNPO1-212ENST00000520850 NUP160Q12769 1436 aa27.63■■■□□ 2.01
TNPO1-212ENST00000520850 CUL7Q14999 1698 aa27.59■■■□□ 2.01
TNPO1-212ENST00000520850 ARHGEF11O15085 1522 aa27.57■■■□□ 2
TNPO1-212ENST00000520850 CARMIL1Q5VZK9 1371 aa27.55■■■□□ 2
TNPO1-212ENST00000520850 RIMBP3CA6NJZ7 1639 aa27.55■■■□□ 2
TNPO1-212ENST00000520850 RIMBP3BA6NNM3 1639 aa27.55■■■□□ 2
TNPO1-212ENST00000520850 RIMBP3Q9UFD9 1639 aa27.55■■■□□ 2
TNPO1-212ENST00000520850 CEP170Q5SW79 1584 aa27.52■■■□□ 2
TNPO1-212ENST00000520850 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
TNPO1-212ENST00000520850 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
TNPO1-212ENST00000520850 SHROOM2Q13796 1616 aa27.39■■□□□ 1.98
TNPO1-212ENST00000520850 KIAA0586Q9BVV6 1533 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms