RNA–Protein interactions for RNA: ENST00000520207.2

SORBS3-208, Transcript of sorbin and SH3 domain containing 3, human

TSL 2

Gene SORBS3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-208	ENST00000520207	JPH4	Q96JJ6	628 aa		34.32	■■■■□ 3.08
SORBS3-208	ENST00000520207	CUL7	Q14999	1698 aa		34.28	■■■■□ 3.08
SORBS3-208	ENST00000520207	KIAA0586	Q9BVV6	1533 aa		34.15	■■■■□ 3.06
SORBS3-208	ENST00000520207	CARMIL1	Q5VZK9	1371 aa		34.13	■■■■□ 3.05
SORBS3-208	ENST00000520207	ADCY10	Q96PN6	1610 aa		33.94	■■■■□ 3.02
SORBS3-208	ENST00000520207	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.92	■■■■□ 3.02
SORBS3-208	ENST00000520207	KIF13A	Q9H1H9	1805 aa		33.9	■■■■□ 3.02
SORBS3-208	ENST00000520207	NPM1	P06748	294 aa	Known RBP eCLIP	33.9	■■■■□ 3.02
SORBS3-208	ENST00000520207	IQGAP2	Q13576	1575 aa		33.89	■■■■□ 3.02
SORBS3-208	ENST00000520207	RAPGEF2	Q9Y4G8	1499 aa		33.85	■■■■□ 3.01
SORBS3-208	ENST00000520207	PTPRG	P23470	1445 aa		33.83	■■■■□ 3.01
SORBS3-208	ENST00000520207	CARMIL2	Q6F5E8	1435 aa		33.82	■■■■□ 3
SORBS3-208	ENST00000520207	MAPKBP1	O60336	1514 aa		33.81	■■■■□ 3
SORBS3-208	ENST00000520207	TNIK	Q9UKE5	1360 aa		33.77	■■■■□ 3
SORBS3-208	ENST00000520207	FAM69C	Q0P6D2	419 aa		33.77	■■■■□ 3
SORBS3-208	ENST00000520207	ABCC10	Q5T3U5	1492 aa		33.76	■■■■□ 3
SORBS3-208	ENST00000520207	DIP2B	Q9P265	1576 aa		33.72	■■■□□ 2.99
SORBS3-208	ENST00000520207	DISP1	Q96F81	1524 aa		33.72	■■■□□ 2.99
SORBS3-208	ENST00000520207	UGGT2	Q9NYU1	1516 aa		33.66	■■■□□ 2.98
SORBS3-208	ENST00000520207	ABCC2	Q92887	1545 aa		33.62	■■■□□ 2.97
SORBS3-208	ENST00000520207	KIAA0556	O60303	1618 aa		33.61	■■■□□ 2.97
SORBS3-208	ENST00000520207	CTTNBP2	Q8WZ74	1663 aa		33.6	■■■□□ 2.97
SORBS3-208	ENST00000520207	UACA	Q9BZF9	1416 aa		33.57	■■■□□ 2.96
SORBS3-208	ENST00000520207	UHRF1BP1L	A0JNW5	1464 aa		33.54	■■■□□ 2.96
SORBS3-208	ENST00000520207	PRX	Q9BXM0	1461 aa		33.54	■■■□□ 2.96
SORBS3-208	ENST00000520207	TSPOAP1	O95153	1857 aa		33.53	■■■□□ 2.96
SORBS3-208	ENST00000520207	ASXL2	Q76L83	1435 aa		33.51	■■■□□ 2.95
SORBS3-208	ENST00000520207	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.48	■■■□□ 2.95
SORBS3-208	ENST00000520207	PLB1	Q6P1J6	1458 aa		33.44	■■■□□ 2.94
SORBS3-208	ENST00000520207	KDM6B	O15054	1643 aa		33.4	■■■□□ 2.94
SORBS3-208	ENST00000520207	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.4	■■■□□ 2.94
SORBS3-208	ENST00000520207	KDM5B	Q9UGL1	1544 aa		33.4	■■■□□ 2.94
SORBS3-208	ENST00000520207	GOLGA3	Q08378	1498 aa		33.39	■■■□□ 2.94
SORBS3-208	ENST00000520207	CSRNP3	Q8WYN3	585 aa		33.34	■■■□□ 2.93
SORBS3-208	ENST00000520207	GLI2	P10070	1586 aa		33.33	■■■□□ 2.93
SORBS3-208	ENST00000520207	EPRS	P07814	1512 aa	Known RBP	33.29	■■■□□ 2.92
SORBS3-208	ENST00000520207	PPRC1	Q5VV67	1664 aa	Known RBP	33.28	■■■□□ 2.92
SORBS3-208	ENST00000520207	ABCA8	O94911	1581 aa		33.26	■■■□□ 2.91
SORBS3-208	ENST00000520207	P3H3	Q8IVL6	736 aa		33.25	■■■□□ 2.91
SORBS3-208	ENST00000520207	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.23	■■■□□ 2.91
SORBS3-208	ENST00000520207	WDR7	Q9Y4E6	1490 aa		33.2	■■■□□ 2.91
SORBS3-208	ENST00000520207	EEA1	Q15075	1411 aa		33.19	■■■□□ 2.9
SORBS3-208	ENST00000520207	MAP3K4	Q9Y6R4	1608 aa		33.19	■■■□□ 2.9
SORBS3-208	ENST00000520207	ARID3C	A6NKF2	412 aa		33.14	■■■□□ 2.9
SORBS3-208	ENST00000520207	RANGAP1	P46060	587 aa	Predicted RBP	33.12	■■■□□ 2.89
SORBS3-208	ENST00000520207	SAMD9	Q5K651	1589 aa		33.11	■■■□□ 2.89
SORBS3-208	ENST00000520207	KCNH8	Q96L42	1107 aa		33.08	■■■□□ 2.89
SORBS3-208	ENST00000520207	TEX14	Q8IWB6	1497 aa		33.07	■■■□□ 2.88
SORBS3-208	ENST00000520207	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.05	■■■□□ 2.88
SORBS3-208	ENST00000520207	ATP10B	O94823	1461 aa		32.98	■■■□□ 2.87
SORBS3-208	ENST00000520207	CFAP43	Q8NDM7	1665 aa		32.97	■■■□□ 2.87
SORBS3-208	ENST00000520207	CD109	Q6YHK3	1445 aa		32.97	■■■□□ 2.87
SORBS3-208	ENST00000520207	KIF21B	O75037	1637 aa		32.97	■■■□□ 2.87
SORBS3-208	ENST00000520207	FHOD3	Q2V2M9	1422 aa		32.96	■■■□□ 2.87
SORBS3-208	ENST00000520207	RAPGEF6	Q8TEU7	1601 aa		32.96	■■■□□ 2.87
SORBS3-208	ENST00000520207	KDM4F	A0A1W2PPD8	638 aa		32.95	■■■□□ 2.87
SORBS3-208	ENST00000520207	EHMT2	Q96KQ7	1210 aa		32.95	■■■□□ 2.87
SORBS3-208	ENST00000520207	CHIC1	Q5VXU3	224 aa		32.93	■■■□□ 2.86
SORBS3-208	ENST00000520207	MAGI3	Q5TCQ9	1506 aa		32.91	■■■□□ 2.86
SORBS3-208	ENST00000520207	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.87	■■■□□ 2.85
SORBS3-208	ENST00000520207	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.87	■■■□□ 2.85
SORBS3-208	ENST00000520207	NUP153	P49790	1475 aa	Known RBP	32.84	■■■□□ 2.85
SORBS3-208	ENST00000520207	EFCAB5	A4FU69	1503 aa		32.8	■■■□□ 2.84
SORBS3-208	ENST00000520207	ADGRL1	O94910	1474 aa		32.78	■■■□□ 2.84
SORBS3-208	ENST00000520207	UBTF	P17480	764 aa	Known RBP	32.77	■■■□□ 2.84
SORBS3-208	ENST00000520207	ABCA9	Q8IUA7	1624 aa		32.76	■■■□□ 2.83
SORBS3-208	ENST00000520207	ARAP3	Q8WWN8	1544 aa		32.63	■■■□□ 2.81
SORBS3-208	ENST00000520207	PLEKHD1	A6NEE1	506 aa		32.61	■■■□□ 2.81
SORBS3-208	ENST00000520207	CDK13	Q14004	1512 aa	Known RBP	32.6	■■■□□ 2.81
SORBS3-208	ENST00000520207	ARHGAP35	Q9NRY4	1499 aa		32.58	■■■□□ 2.81
SORBS3-208	ENST00000520207	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.55	■■■□□ 2.8
SORBS3-208	ENST00000520207	NEO1	Q92859	1461 aa		32.54	■■■□□ 2.8
SORBS3-208	ENST00000520207	RAPGEF3	O95398	923 aa		32.53	■■■□□ 2.8
SORBS3-208	ENST00000520207	PHLDB1	Q86UU1	1377 aa		32.53	■■■□□ 2.8
SORBS3-208	ENST00000520207	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
SORBS3-208	ENST00000520207	FMN1	Q68DA7	1419 aa		32.5	■■■□□ 2.79
SORBS3-208	ENST00000520207	TTC37	Q6PGP7	1564 aa		32.49	■■■□□ 2.79
SORBS3-208	ENST00000520207	HECW1	Q76N89	1606 aa		32.48	■■■□□ 2.79
SORBS3-208	ENST00000520207	FRMPD1	Q5SYB0	1578 aa		32.46	■■■□□ 2.79
SORBS3-208	ENST00000520207	FANCA	O15360	1455 aa		32.42	■■■□□ 2.78
SORBS3-208	ENST00000520207	AKNA	Q7Z591	1439 aa		32.39	■■■□□ 2.78
SORBS3-208	ENST00000520207	CFAP74	Q9C0B2	1584 aa		32.37	■■■□□ 2.77
SORBS3-208	ENST00000520207	DENND4B	O75064	1496 aa	Predicted RBP	32.35	■■■□□ 2.77
SORBS3-208	ENST00000520207	RICTOR	Q6R327	1708 aa		32.32	■■■□□ 2.76
SORBS3-208	ENST00000520207	LRRIQ1	Q96JM4	1722 aa		32.3	■■■□□ 2.76
SORBS3-208	ENST00000520207	KIF14	Q15058	1648 aa		32.29	■■■□□ 2.76
SORBS3-208	ENST00000520207	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.28	■■■□□ 2.76
SORBS3-208	ENST00000520207	HECW2	Q9P2P5	1572 aa		32.27	■■■□□ 2.76
SORBS3-208	ENST00000520207	PLCH2	O75038	1416 aa		32.26	■■■□□ 2.76
SORBS3-208	ENST00000520207	ARHGEF40	Q8TER5	1519 aa		32.26	■■■□□ 2.76
SORBS3-208	ENST00000520207	PCF11	O94913	1555 aa	Known RBP	32.26	■■■□□ 2.75
SORBS3-208	ENST00000520207	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.26	■■■□□ 2.75
SORBS3-208	ENST00000520207	MYO5C	Q9NQX4	1742 aa		32.23	■■■□□ 2.75
SORBS3-208	ENST00000520207	TRO	Q12816	1431 aa	Predicted RBP	32.23	■■■□□ 2.75
SORBS3-208	ENST00000520207	ADAMTSL3	P82987	1691 aa		32.21	■■■□□ 2.75
SORBS3-208	ENST00000520207	CLIP1	P30622	1438 aa		32.19	■■■□□ 2.74
SORBS3-208	ENST00000520207	SCAPER	Q9BY12	1400 aa		32.19	■■■□□ 2.74
SORBS3-208	ENST00000520207	CASKIN1	Q8WXD9	1431 aa		32.18	■■■□□ 2.74
SORBS3-208	ENST00000520207	BCORL1	Q5H9F3	1711 aa		32.18	■■■□□ 2.74
SORBS3-208	ENST00000520207	ZMYM4	Q5VZL5	1548 aa		32.18	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms