RNA–Protein interactions for RNA: ENST00000520207.2

SORBS3-208, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-208ENST00000520207 NISCHQ9Y2I1 1504 aa49.14■■■■■ 5.46
SORBS3-208ENST00000520207 CCDC180Q9P1Z9 1646 aa43.97■■■■■ 4.63
SORBS3-208ENST00000520207 ABCC9O60706 1549 aa43.85■■■■■ 4.61
SORBS3-208ENST00000520207 RB1CC1Q8TDY2 1594 aa41.76■■■■■ 4.27
SORBS3-208ENST00000520207 NACADO15069 1562 aa41.5■■■■■ 4.23
SORBS3-208ENST00000520207 DCAF8L2P0C7V8 631 aa41.49■■■■■ 4.23
SORBS3-208ENST00000520207 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
SORBS3-208ENST00000520207 PABPN1Q86U42 306 aaKnown RBP eCLIP40.88■■■■■ 4.134e-7■■□□□ 14.1
SORBS3-208ENST00000520207 DNAJC5BQ9UF47 199 aa40.88■■■■■ 4.13
SORBS3-208ENST00000520207 UNC13AQ9UPW8 1703 aa40.86■■■■■ 4.13
SORBS3-208ENST00000520207 ZCCHC6Q5VYS8 1495 aaKnown RBP40.79■■■■■ 4.12
SORBS3-208ENST00000520207 BICRAQ9NZM4 1560 aa40.56■■■■■ 4.08
SORBS3-208ENST00000520207 DCAF1Q9Y4B6 1507 aa40.53■■■■■ 4.08
SORBS3-208ENST00000520207 SCRIBQ14160 1630 aa40.21■■■■■ 4.03
SORBS3-208ENST00000520207 SHROOM4Q9ULL8 1493 aa39.93■■■■□ 3.98
SORBS3-208ENST00000520207 CC2D2AQ9P2K1 1620 aa39.58■■■■□ 3.93
SORBS3-208ENST00000520207 EIF4G1Q04637 1599 aaKnown RBP39.55■■■■□ 3.92
SORBS3-208ENST00000520207 CECR2Q9BXF3 1484 aa39.43■■■■□ 3.9
SORBS3-208ENST00000520207 SMARCA4P51532 1647 aa38.31■■■■□ 3.72
SORBS3-208ENST00000520207 NCAPD3P42695 1498 aa38.3■■■■□ 3.72
SORBS3-208ENST00000520207 ATAD2BQ9ULI0 1458 aa38.27■■■■□ 3.72
SORBS3-208ENST00000520207 SMARCA2P51531 1590 aa38.15■■■■□ 3.7
SORBS3-208ENST00000520207 BAZ1AQ9NRL2 1556 aaPredicted RBP38.13■■■■□ 3.69
SORBS3-208ENST00000520207 HMGXB3Q12766 1538 aa38.07■■■■□ 3.68
SORBS3-208ENST00000520207 BAZ1BQ9UIG0 1483 aaKnown RBP37.94■■■■□ 3.66
SORBS3-208ENST00000520207 MROH2BQ7Z745 1585 aa37.92■■■■□ 3.66
SORBS3-208ENST00000520207 PEG3Q9GZU2 1588 aa37.86■■■■□ 3.65
SORBS3-208ENST00000520207 ERCC6Q03468 1493 aa37.84■■■■□ 3.65
SORBS3-208ENST00000520207 NESP48681 1621 aa37.74■■■■□ 3.63
SORBS3-208ENST00000520207 CUX2O14529 1486 aa37.59■■■■□ 3.61
SORBS3-208ENST00000520207 WIZO95785 1651 aa37.5■■■■□ 3.59
SORBS3-208ENST00000520207 LAMC3Q9Y6N6 1575 aa37.42■■■■□ 3.58
SORBS3-208ENST00000520207 DNAJC5Q9H3Z4 198 aa37.29■■■■□ 3.56
SORBS3-208ENST00000520207 THOC2Q8NI27 1593 aaKnown RBP37.27■■■■□ 3.56
SORBS3-208ENST00000520207 KIF21AQ7Z4S6 1674 aa37.25■■■■□ 3.55
SORBS3-208ENST00000520207 PDS5BQ9NTI5 1447 aa37.2■■■■□ 3.55
SORBS3-208ENST00000520207 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
SORBS3-208ENST00000520207 CADPSQ9ULU8 1353 aa37.17■■■■□ 3.54
SORBS3-208ENST00000520207 TOP2AP11388 1531 aaKnown RBP37■■■■□ 3.51
SORBS3-208ENST00000520207 MRC2Q9UBG0 1479 aa36.91■■■■□ 3.5
SORBS3-208ENST00000520207 CEP164Q9UPV0 1460 aa36.82■■■■□ 3.48
SORBS3-208ENST00000520207 CFTRP13569 1480 aa36.8■■■■□ 3.48
SORBS3-208ENST00000520207 FANCD2Q9BXW9 1451 aa36.8■■■■□ 3.48
SORBS3-208ENST00000520207 WDR62O43379 1518 aa36.8■■■■□ 3.48
SORBS3-208ENST00000520207 CCDC88BA6NC98 1476 aa36.58■■■■□ 3.45
SORBS3-208ENST00000520207 URB2Q14146 1524 aaKnown RBP36.49■■■■□ 3.43
SORBS3-208ENST00000520207 PRDM2Q13029 1718 aa36.47■■■■□ 3.43
SORBS3-208ENST00000520207 TOPBP1Q92547 1522 aa36.13■■■■□ 3.37
SORBS3-208ENST00000520207 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
SORBS3-208ENST00000520207 ZNF608Q9ULD9 1512 aaPredicted RBP36.03■■■■□ 3.36
SORBS3-208ENST00000520207 DNMBPQ6XZF7 1577 aa36.01■■■■□ 3.35
SORBS3-208ENST00000520207 ABCC8Q09428 1581 aa35.98■■■■□ 3.35
SORBS3-208ENST00000520207 OSCARQ8IYS5 282 aa35.92■■■■□ 3.34
SORBS3-208ENST00000520207 TRIM41Q8WV44 630 aa35.9■■■■□ 3.34
SORBS3-208ENST00000520207 SUPT5HO00267 1087 aaKnown RBP35.83■■■■□ 3.33
SORBS3-208ENST00000520207 EIF4G3O43432 1585 aaKnown RBP35.83■■■■□ 3.33
SORBS3-208ENST00000520207 POLA1P09884 1462 aaPredicted RBP35.78■■■■□ 3.32
SORBS3-208ENST00000520207 TARBP1Q13395 1621 aaKnown RBP35.77■■■■□ 3.32
SORBS3-208ENST00000520207 AQRO60306 1485 aaKnown RBP eCLIP35.72■■■■□ 3.31
SORBS3-208ENST00000520207 RAD54L2Q9Y4B4 1467 aa35.68■■■■□ 3.3
SORBS3-208ENST00000520207 CUX1P39880 1505 aa35.61■■■■□ 3.29
SORBS3-208ENST00000520207 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
SORBS3-208ENST00000520207 SOGA1O94964 1423 aa35.6■■■■□ 3.29
SORBS3-208ENST00000520207 TDRD9Q8NDG6 1382 aaKnown RBP35.54■■■■□ 3.28
SORBS3-208ENST00000520207 CHD1O14646 1710 aa35.53■■■■□ 3.28
SORBS3-208ENST00000520207 RIMBP3CA6NJZ7 1639 aa35.5■■■■□ 3.27
SORBS3-208ENST00000520207 RIMBP3BA6NNM3 1639 aa35.5■■■■□ 3.27
SORBS3-208ENST00000520207 RIMBP3Q9UFD9 1639 aa35.5■■■■□ 3.27
SORBS3-208ENST00000520207 FBLN2P98095 1184 aa35.48■■■■□ 3.27
SORBS3-208ENST00000520207 ARHGEF11O15085 1522 aa35.4■■■■□ 3.26
SORBS3-208ENST00000520207 SNAPC4Q5SXM2 1469 aa35.38■■■■□ 3.25
SORBS3-208ENST00000520207 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
SORBS3-208ENST00000520207 GRIN2BQ13224 1484 aa35.26■■■■□ 3.23
SORBS3-208ENST00000520207 MAGI1Q96QZ7 1491 aaPredicted RBP35.22■■■■□ 3.23
SORBS3-208ENST00000520207 PBRM1Q86U86 1689 aa35.19■■■■□ 3.22
SORBS3-208ENST00000520207 CHMP7Q8WUX9 453 aaPredicted RBP35.19■■■■□ 3.22
SORBS3-208ENST00000520207 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
SORBS3-208ENST00000520207 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
SORBS3-208ENST00000520207 CYB5RLQ6IPT4 315 aa35.14■■■■□ 3.22
SORBS3-208ENST00000520207 SYNJ2O15056 1496 aa35.12■■■■□ 3.21
SORBS3-208ENST00000520207 ABCA5Q8WWZ7 1642 aa35.12■■■■□ 3.21
SORBS3-208ENST00000520207 WRNQ14191 1432 aaPredicted RBP eCLIP35.1■■■■□ 3.21
SORBS3-208ENST00000520207 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
SORBS3-208ENST00000520207 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
SORBS3-208ENST00000520207 CLASP1Q7Z460 1538 aa35.08■■■■□ 3.21
SORBS3-208ENST00000520207 TOP2BQ02880 1626 aa35.07■■■■□ 3.21
SORBS3-208ENST00000520207 BIVM-ERCC5R4GMW8 1640 aa35.07■■■■□ 3.21
SORBS3-208ENST00000520207 ADAMTS12P58397 1594 aa34.87■■■■□ 3.17
SORBS3-208ENST00000520207 GRIN2AQ12879 1464 aa34.83■■■■□ 3.17
SORBS3-208ENST00000520207 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
SORBS3-208ENST00000520207 CEP170Q5SW79 1584 aa34.72■■■■□ 3.15
SORBS3-208ENST00000520207 ERICH3Q5RHP9 1530 aa34.71■■■■□ 3.15
SORBS3-208ENST00000520207 TRHP20396 242 aaPredicted RBP34.7■■■■□ 3.15
SORBS3-208ENST00000520207 NUP160Q12769 1436 aa34.67■■■■□ 3.14
SORBS3-208ENST00000520207 ERCC6L2Q5T890 1561 aa34.62■■■■□ 3.13
SORBS3-208ENST00000520207 SHROOM2Q13796 1616 aa34.49■■■■□ 3.11
SORBS3-208ENST00000520207 KIF27Q86VH2 1401 aa34.39■■■■□ 3.1
SORBS3-208ENST00000520207 RUSC2Q8N2Y8 1516 aa34.36■■■■□ 3.09
SORBS3-208ENST00000520207 PRG4Q92954 1404 aaPredicted RBP34.36■■■■□ 3.09
SORBS3-208ENST00000520207 IGF1RP08069 1367 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms