RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
CLK4-203ENST00000519583 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
CLK4-203ENST00000519583 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
CLK4-203ENST00000519583 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.35
CLK4-203ENST00000519583 JPH4Q96JJ6 628 aa12.83□□□□□ -0.35
CLK4-203ENST00000519583 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
CLK4-203ENST00000519583 CYB5RLQ6IPT4 315 aa12.81□□□□□ -0.36
CLK4-203ENST00000519583 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
CLK4-203ENST00000519583 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
CLK4-203ENST00000519583 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
CLK4-203ENST00000519583 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
CLK4-203ENST00000519583 IQGAP2Q13576 1575 aa12.77□□□□□ -0.36
CLK4-203ENST00000519583 KIF21BO75037 1637 aa12.74□□□□□ -0.37
CLK4-203ENST00000519583 CTTNBP2Q8WZ74 1663 aa12.74□□□□□ -0.37
CLK4-203ENST00000519583 TTBK1Q5TCY1 1321 aaPredicted RBP12.71□□□□□ -0.37
CLK4-203ENST00000519583 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.37
CLK4-203ENST00000519583 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.38
CLK4-203ENST00000519583 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
CLK4-203ENST00000519583 GOLGA3Q08378 1498 aa12.7□□□□□ -0.38
CLK4-203ENST00000519583 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
CLK4-203ENST00000519583 DISP1Q96F81 1524 aa12.68□□□□□ -0.38
CLK4-203ENST00000519583 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
CLK4-203ENST00000519583 PTPRGP23470 1445 aa12.66□□□□□ -0.38
CLK4-203ENST00000519583 KIAA0556O60303 1618 aa12.65□□□□□ -0.38
CLK4-203ENST00000519583 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
CLK4-203ENST00000519583 SAMD9Q5K651 1589 aa12.58□□□□□ -0.4
CLK4-203ENST00000519583 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
CLK4-203ENST00000519583 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLK4-203ENST00000519583 UACAQ9BZF9 1416 aa12.57□□□□□ -0.4
CLK4-203ENST00000519583 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
CLK4-203ENST00000519583 FHOD3Q2V2M9 1422 aa12.56□□□□□ -0.4
CLK4-203ENST00000519583 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
CLK4-203ENST00000519583 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
CLK4-203ENST00000519583 PLB1Q6P1J6 1458 aa12.54□□□□□ -0.4
CLK4-203ENST00000519583 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
CLK4-203ENST00000519583 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
CLK4-203ENST00000519583 UHRF1BP1LA0JNW5 1464 aa12.52□□□□□ -0.4
CLK4-203ENST00000519583 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
CLK4-203ENST00000519583 ABCA8O94911 1581 aa12.5□□□□□ -0.41
CLK4-203ENST00000519583 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
CLK4-203ENST00000519583 CLIP1P30622 1438 aa12.48□□□□□ -0.41
CLK4-203ENST00000519583 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
CLK4-203ENST00000519583 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
CLK4-203ENST00000519583 MAPKBP1O60336 1514 aa12.46□□□□□ -0.42
CLK4-203ENST00000519583 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
CLK4-203ENST00000519583 ATP1B4Q9UN42 357 aaPredicted RBP12.45□□□□□ -0.42
CLK4-203ENST00000519583 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
CLK4-203ENST00000519583 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
CLK4-203ENST00000519583 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
CLK4-203ENST00000519583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
CLK4-203ENST00000519583 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
CLK4-203ENST00000519583 PPARGC1BQ86YN6 1023 aaKnown RBP12.43□□□□□ -0.42
CLK4-203ENST00000519583 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
CLK4-203ENST00000519583 NUP153P49790 1475 aaKnown RBP12.42□□□□□ -0.42
CLK4-203ENST00000519583 ATP10BO94823 1461 aa12.42□□□□□ -0.42
CLK4-203ENST00000519583 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
CLK4-203ENST00000519583 KCNH8Q96L42 1107 aa12.38□□□□□ -0.43
CLK4-203ENST00000519583 DIP2BQ9P265 1576 aa12.38□□□□□ -0.43
CLK4-203ENST00000519583 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
CLK4-203ENST00000519583 KIF13AQ9H1H9 1805 aa12.37□□□□□ -0.43
CLK4-203ENST00000519583 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
CLK4-203ENST00000519583 CDK13Q14004 1512 aaKnown RBP12.36□□□□□ -0.43
CLK4-203ENST00000519583 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
CLK4-203ENST00000519583 CASKIN1Q8WXD9 1431 aa12.35□□□□□ -0.43
CLK4-203ENST00000519583 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
CLK4-203ENST00000519583 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
CLK4-203ENST00000519583 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
CLK4-203ENST00000519583 GLI2P10070 1586 aa12.32□□□□□ -0.44
CLK4-203ENST00000519583 HRCP23327 699 aa12.31□□□□□ -0.44
CLK4-203ENST00000519583 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
CLK4-203ENST00000519583 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
CLK4-203ENST00000519583 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
CLK4-203ENST00000519583 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
CLK4-203ENST00000519583 LRRIQ1Q96JM4 1722 aa12.29□□□□□ -0.44
CLK4-203ENST00000519583 CD109Q6YHK3 1445 aa12.27□□□□□ -0.44
CLK4-203ENST00000519583 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
CLK4-203ENST00000519583 TROQ12816 1431 aaPredicted RBP12.25□□□□□ -0.45
CLK4-203ENST00000519583 CFAP43Q8NDM7 1665 aa12.25□□□□□ -0.45
CLK4-203ENST00000519583 ABCA9Q8IUA7 1624 aa12.24□□□□□ -0.45
CLK4-203ENST00000519583 PPRC1Q5VV67 1664 aaKnown RBP12.23□□□□□ -0.45
CLK4-203ENST00000519583 TEX14Q8IWB6 1497 aa12.23□□□□□ -0.45
CLK4-203ENST00000519583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLK4-203ENST00000519583 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
CLK4-203ENST00000519583 MTUS2Q5JR59 1369 aa12.21□□□□□ -0.45
CLK4-203ENST00000519583 KIF14Q15058 1648 aa12.21□□□□□ -0.45
CLK4-203ENST00000519583 TTC37Q6PGP7 1564 aa12.21□□□□□ -0.46
CLK4-203ENST00000519583 APLP2Q06481 763 aa12.21□□□□□ -0.46
CLK4-203ENST00000519583 KDM6BO15054 1643 aa12.18□□□□□ -0.46
CLK4-203ENST00000519583 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
CLK4-203ENST00000519583 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
CLK4-203ENST00000519583 PLCH2O75038 1416 aa12.16□□□□□ -0.46
CLK4-203ENST00000519583 FANCAO15360 1455 aa12.15□□□□□ -0.46
CLK4-203ENST00000519583 COL17A1Q9UMD9 1497 aaPredicted RBP12.15□□□□□ -0.46
CLK4-203ENST00000519583 NEO1Q92859 1461 aa12.14□□□□□ -0.47
CLK4-203ENST00000519583 MYO5CQ9NQX4 1742 aa12.14□□□□□ -0.47
CLK4-203ENST00000519583 KANK4Q5T7N3 995 aaPredicted RBP12.14□□□□□ -0.47
CLK4-203ENST00000519583 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
CLK4-203ENST00000519583 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
CLK4-203ENST00000519583 LRRC9Q6ZRR7 1453 aa12.13□□□□□ -0.47
CLK4-203ENST00000519583 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms