RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
PCDHGB4-201ENST00000519479 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
PCDHGB4-201ENST00000519479 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
PCDHGB4-201ENST00000519479 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
PCDHGB4-201ENST00000519479 ZNF326Q5BKZ1 582 aaKnown RBP15.81■□□□□ 0.12
PCDHGB4-201ENST00000519479 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
PCDHGB4-201ENST00000519479 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
PCDHGB4-201ENST00000519479 BCANQ96GW7 911 aa15.79■□□□□ 0.12
PCDHGB4-201ENST00000519479 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
PCDHGB4-201ENST00000519479 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
PCDHGB4-201ENST00000519479 NESP48681 1621 aa15.78■□□□□ 0.12
PCDHGB4-201ENST00000519479 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
PCDHGB4-201ENST00000519479 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
PCDHGB4-201ENST00000519479 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
PCDHGB4-201ENST00000519479 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
PCDHGB4-201ENST00000519479 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
PCDHGB4-201ENST00000519479 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
PCDHGB4-201ENST00000519479 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
PCDHGB4-201ENST00000519479 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
PCDHGB4-201ENST00000519479 SIN3AQ96ST3 1273 aa15.67■□□□□ 0.1
PCDHGB4-201ENST00000519479 IFT140Q96RY7 1462 aa15.67■□□□□ 0.1
PCDHGB4-201ENST00000519479 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
PCDHGB4-201ENST00000519479 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
PCDHGB4-201ENST00000519479 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
PCDHGB4-201ENST00000519479 PLEKHD1A6NEE1 506 aa15.63■□□□□ 0.09
PCDHGB4-201ENST00000519479 CUX1P39880 1505 aa15.6■□□□□ 0.09
PCDHGB4-201ENST00000519479 IGF1RP08069 1367 aa15.6■□□□□ 0.09
PCDHGB4-201ENST00000519479 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
PCDHGB4-201ENST00000519479 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
PCDHGB4-201ENST00000519479 FKBP8Q14318 412 aa15.57■□□□□ 0.08
PCDHGB4-201ENST00000519479 SETD5Q9C0A6 1442 aa15.57■□□□□ 0.08
PCDHGB4-201ENST00000519479 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
PCDHGB4-201ENST00000519479 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
PCDHGB4-201ENST00000519479 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
PCDHGB4-201ENST00000519479 KIF21BO75037 1637 aa15.54■□□□□ 0.08
PCDHGB4-201ENST00000519479 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
PCDHGB4-201ENST00000519479 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
PCDHGB4-201ENST00000519479 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
PCDHGB4-201ENST00000519479 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
PCDHGB4-201ENST00000519479 DHX57Q6P158 1386 aaKnown RBP15.51■□□□□ 0.07
PCDHGB4-201ENST00000519479 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
PCDHGB4-201ENST00000519479 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHGB4-201ENST00000519479 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
PCDHGB4-201ENST00000519479 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
PCDHGB4-201ENST00000519479 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
PCDHGB4-201ENST00000519479 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
PCDHGB4-201ENST00000519479 FAM9BQ8IZU0 186 aa15.49■□□□□ 0.07
PCDHGB4-201ENST00000519479 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
PCDHGB4-201ENST00000519479 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
PCDHGB4-201ENST00000519479 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
PCDHGB4-201ENST00000519479 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
PCDHGB4-201ENST00000519479 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
PCDHGB4-201ENST00000519479 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
PCDHGB4-201ENST00000519479 KDM2AQ9Y2K7 1162 aa15.43■□□□□ 0.06
PCDHGB4-201ENST00000519479 ARAP1Q96P48 1450 aa15.43■□□□□ 0.06
PCDHGB4-201ENST00000519479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHGB4-201ENST00000519479 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
PCDHGB4-201ENST00000519479 MRS2Q9HD23 443 aa15.42■□□□□ 0.06
PCDHGB4-201ENST00000519479 PTPRGP23470 1445 aa15.36■□□□□ 0.05
PCDHGB4-201ENST00000519479 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB4-201ENST00000519479 ESF1Q9H501 851 aaKnown RBP15.36■□□□□ 0.05
PCDHGB4-201ENST00000519479 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
PCDHGB4-201ENST00000519479 MAGI1Q96QZ7 1491 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB4-201ENST00000519479 TMC1Q8TDI8 760 aa15.33■□□□□ 0.04
PCDHGB4-201ENST00000519479 CUL7Q14999 1698 aa15.32■□□□□ 0.04
PCDHGB4-201ENST00000519479 FOXD1Q16676 465 aa15.32■□□□□ 0.04
PCDHGB4-201ENST00000519479 IRX6P78412 446 aaPredicted RBP15.32■□□□□ 0.04
PCDHGB4-201ENST00000519479 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
PCDHGB4-201ENST00000519479 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
PCDHGB4-201ENST00000519479 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
PCDHGB4-201ENST00000519479 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
PCDHGB4-201ENST00000519479 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
PCDHGB4-201ENST00000519479 LRRC9Q6ZRR7 1453 aa15.29■□□□□ 0.04
PCDHGB4-201ENST00000519479 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
PCDHGB4-201ENST00000519479 MPHOSPH9Q99550 1183 aa15.28■□□□□ 0.04
PCDHGB4-201ENST00000519479 RGL3Q3MIN7 710 aa15.27■□□□□ 0.04
PCDHGB4-201ENST00000519479 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.04
PCDHGB4-201ENST00000519479 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
PCDHGB4-201ENST00000519479 HSPA5P11021 654 aaKnown RBP15.27■□□□□ 0.03
PCDHGB4-201ENST00000519479 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
PCDHGB4-201ENST00000519479 KIAA0586Q9BVV6 1533 aa15.25■□□□□ 0.03
PCDHGB4-201ENST00000519479 CCER2I3L3R5 266 aa15.25■□□□□ 0.03
PCDHGB4-201ENST00000519479 RTL5Q5HYW3 569 aaPredicted RBP15.24■□□□□ 0.03
PCDHGB4-201ENST00000519479 WDR62O43379 1518 aa15.24■□□□□ 0.03
PCDHGB4-201ENST00000519479 CARD11Q9BXL7 1154 aa15.24■□□□□ 0.03
PCDHGB4-201ENST00000519479 KIF21AQ7Z4S6 1674 aa15.23■□□□□ 0.03
PCDHGB4-201ENST00000519479 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
PCDHGB4-201ENST00000519479 EFCAB2Q5VUJ9 269 aa15.22■□□□□ 0.03
PCDHGB4-201ENST00000519479 PRG4Q92954 1404 aaPredicted RBP15.2■□□□□ 0.02
PCDHGB4-201ENST00000519479 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
PCDHGB4-201ENST00000519479 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
PCDHGB4-201ENST00000519479 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
PCDHGB4-201ENST00000519479 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
PCDHGB4-201ENST00000519479 ZNF608Q9ULD9 1512 aaPredicted RBP15.19■□□□□ 0.02
PCDHGB4-201ENST00000519479 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
PCDHGB4-201ENST00000519479 PKD2Q13563 968 aa15.19■□□□□ 0.02
PCDHGB4-201ENST00000519479 RSPH4AQ5TD94 716 aa15.18■□□□□ 0.02
PCDHGB4-201ENST00000519479 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
PCDHGB4-201ENST00000519479 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
PCDHGB4-201ENST00000519479 WDR97A6NE52 1622 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms