RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
PCDHGB4-201ENST00000519479 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
PCDHGB4-201ENST00000519479 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
PCDHGB4-201ENST00000519479 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
PCDHGB4-201ENST00000519479 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
PCDHGB4-201ENST00000519479 ABCC9O60706 1549 aa18.45■□□□□ 0.54
PCDHGB4-201ENST00000519479 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
PCDHGB4-201ENST00000519479 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
PCDHGB4-201ENST00000519479 FAM9AQ8IZU1 332 aaPredicted RBP18.03■□□□□ 0.48
PCDHGB4-201ENST00000519479 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
PCDHGB4-201ENST00000519479 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
PCDHGB4-201ENST00000519479 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
PCDHGB4-201ENST00000519479 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
PCDHGB4-201ENST00000519479 NACADO15069 1562 aa17.8■□□□□ 0.44
PCDHGB4-201ENST00000519479 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
PCDHGB4-201ENST00000519479 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
PCDHGB4-201ENST00000519479 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
PCDHGB4-201ENST00000519479 SCRIBQ14160 1630 aa17.58■□□□□ 0.41
PCDHGB4-201ENST00000519479 TTBK1Q5TCY1 1321 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB4-201ENST00000519479 MYO15BQ96JP2 1530 aa17.54■□□□□ 0.4
PCDHGB4-201ENST00000519479 HRCP23327 699 aa17.48■□□□□ 0.39
PCDHGB4-201ENST00000519479 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
PCDHGB4-201ENST00000519479 APLP2Q06481 763 aa17.44■□□□□ 0.38
PCDHGB4-201ENST00000519479 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
PCDHGB4-201ENST00000519479 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
PCDHGB4-201ENST00000519479 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
PCDHGB4-201ENST00000519479 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
PCDHGB4-201ENST00000519479 CCER1Q8TC90 406 aaPredicted RBP17.28■□□□□ 0.36
PCDHGB4-201ENST00000519479 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
PCDHGB4-201ENST00000519479 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
PCDHGB4-201ENST00000519479 BAZ1AQ9NRL2 1556 aaPredicted RBP17■□□□□ 0.31
PCDHGB4-201ENST00000519479 ATP1B4Q9UN42 357 aaPredicted RBP16.91■□□□□ 0.3
PCDHGB4-201ENST00000519479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
PCDHGB4-201ENST00000519479 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
PCDHGB4-201ENST00000519479 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
PCDHGB4-201ENST00000519479 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
PCDHGB4-201ENST00000519479 MYT1Q01538 1121 aa16.82■□□□□ 0.28
PCDHGB4-201ENST00000519479 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
PCDHGB4-201ENST00000519479 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
PCDHGB4-201ENST00000519479 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
PCDHGB4-201ENST00000519479 ITGAEP38570 1179 aa16.69■□□□□ 0.26
PCDHGB4-201ENST00000519479 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
PCDHGB4-201ENST00000519479 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
PCDHGB4-201ENST00000519479 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
PCDHGB4-201ENST00000519479 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
PCDHGB4-201ENST00000519479 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
PCDHGB4-201ENST00000519479 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
PCDHGB4-201ENST00000519479 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
PCDHGB4-201ENST00000519479 WIZO95785 1651 aa16.43■□□□□ 0.22
PCDHGB4-201ENST00000519479 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
PCDHGB4-201ENST00000519479 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
PCDHGB4-201ENST00000519479 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
PCDHGB4-201ENST00000519479 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
PCDHGB4-201ENST00000519479 CEP162Q5TB80 1403 aa16.39■□□□□ 0.21
PCDHGB4-201ENST00000519479 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
PCDHGB4-201ENST00000519479 EEA1Q15075 1411 aa16.38■□□□□ 0.21
PCDHGB4-201ENST00000519479 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
PCDHGB4-201ENST00000519479 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
PCDHGB4-201ENST00000519479 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
PCDHGB4-201ENST00000519479 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
PCDHGB4-201ENST00000519479 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
PCDHGB4-201ENST00000519479 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
PCDHGB4-201ENST00000519479 FBLN2P98095 1184 aa16.31■□□□□ 0.2
PCDHGB4-201ENST00000519479 CLIP1P30622 1438 aa16.31■□□□□ 0.2
PCDHGB4-201ENST00000519479 GOLGA3Q08378 1498 aa16.3■□□□□ 0.2
PCDHGB4-201ENST00000519479 SOGA1O94964 1423 aa16.3■□□□□ 0.2
PCDHGB4-201ENST00000519479 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
PCDHGB4-201ENST00000519479 ABCC8Q09428 1581 aa16.27■□□□□ 0.2
PCDHGB4-201ENST00000519479 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
PCDHGB4-201ENST00000519479 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
PCDHGB4-201ENST00000519479 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
PCDHGB4-201ENST00000519479 KIF27Q86VH2 1401 aa16.19■□□□□ 0.18
PCDHGB4-201ENST00000519479 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
PCDHGB4-201ENST00000519479 NEFLP07196 543 aa16.18■□□□□ 0.18
PCDHGB4-201ENST00000519479 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
PCDHGB4-201ENST00000519479 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
PCDHGB4-201ENST00000519479 ERICH6Q7L0X2 663 aa16.11■□□□□ 0.17
PCDHGB4-201ENST00000519479 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
PCDHGB4-201ENST00000519479 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
PCDHGB4-201ENST00000519479 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
PCDHGB4-201ENST00000519479 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
PCDHGB4-201ENST00000519479 ARID3CA6NKF2 412 aa16.04■□□□□ 0.16
PCDHGB4-201ENST00000519479 POLR3GLQ9BT43 218 aa16.02■□□□□ 0.15
PCDHGB4-201ENST00000519479 CUX2O14529 1486 aa16.01■□□□□ 0.15
PCDHGB4-201ENST00000519479 CFTRP13569 1480 aa15.99■□□□□ 0.15
PCDHGB4-201ENST00000519479 RUSC2Q8N2Y8 1516 aa15.98■□□□□ 0.15
PCDHGB4-201ENST00000519479 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
PCDHGB4-201ENST00000519479 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
PCDHGB4-201ENST00000519479 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
PCDHGB4-201ENST00000519479 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
PCDHGB4-201ENST00000519479 MIER1Q8N108 512 aa15.92■□□□□ 0.14
PCDHGB4-201ENST00000519479 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
PCDHGB4-201ENST00000519479 ANP32CO43423 234 aa15.9■□□□□ 0.14
PCDHGB4-201ENST00000519479 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
PCDHGB4-201ENST00000519479 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
PCDHGB4-201ENST00000519479 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
PCDHGB4-201ENST00000519479 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
PCDHGB4-201ENST00000519479 RAPGEF2Q9Y4G8 1499 aa15.85■□□□□ 0.13
PCDHGB4-201ENST00000519479 KANK4Q5T7N3 995 aaPredicted RBP15.84■□□□□ 0.13
PCDHGB4-201ENST00000519479 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms