RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
SNTB1-203ENST00000519177 WDR62O43379 1518 aa28.28■■■□□ 2.12
SNTB1-203ENST00000519177 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
SNTB1-203ENST00000519177 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
SNTB1-203ENST00000519177 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.11
SNTB1-203ENST00000519177 IFT140Q96RY7 1462 aa28.2■■■□□ 2.11
SNTB1-203ENST00000519177 RRBP1Q9P2E9 1410 aaKnown RBP28.18■■■□□ 2.1
SNTB1-203ENST00000519177 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
SNTB1-203ENST00000519177 AQRO60306 1485 aaKnown RBP eCLIP28.16■■■□□ 2.19e-7■□□□□ 9.6
SNTB1-203ENST00000519177 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
SNTB1-203ENST00000519177 P3H3Q8IVL6 736 aa28.14■■■□□ 2.1
SNTB1-203ENST00000519177 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
SNTB1-203ENST00000519177 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
SNTB1-203ENST00000519177 FYCO1Q9BQS8 1478 aa28.13■■■□□ 2.09
SNTB1-203ENST00000519177 CFAP43Q8NDM7 1665 aa28.13■■■□□ 2.09
SNTB1-203ENST00000519177 ADAMTS12P58397 1594 aa28.12■■■□□ 2.09
SNTB1-203ENST00000519177 CASKIN1Q8WXD9 1431 aa28.11■■■□□ 2.09
SNTB1-203ENST00000519177 LRRC9Q6ZRR7 1453 aa28.11■■■□□ 2.09
SNTB1-203ENST00000519177 ERCC6Q03468 1493 aa28.1■■■□□ 2.09
SNTB1-203ENST00000519177 FMN1Q68DA7 1419 aa28.08■■■□□ 2.09
SNTB1-203ENST00000519177 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
SNTB1-203ENST00000519177 ZNF608Q9ULD9 1512 aaPredicted RBP28.04■■■□□ 2.08
SNTB1-203ENST00000519177 CCNB3Q8WWL7 1395 aa28.04■■■□□ 2.08
SNTB1-203ENST00000519177 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
SNTB1-203ENST00000519177 IQGAP2Q13576 1575 aa27.95■■■□□ 2.06
SNTB1-203ENST00000519177 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
SNTB1-203ENST00000519177 ATP1B4Q9UN42 357 aaPredicted RBP27.93■■■□□ 2.06
SNTB1-203ENST00000519177 PHLDB1Q86UU1 1377 aa27.89■■■□□ 2.06
SNTB1-203ENST00000519177 UGGT2Q9NYU1 1516 aa27.83■■■□□ 2.05
SNTB1-203ENST00000519177 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
SNTB1-203ENST00000519177 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
SNTB1-203ENST00000519177 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
SNTB1-203ENST00000519177 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
SNTB1-203ENST00000519177 CLSPNQ9HAW4 1339 aa27.79■■■□□ 2.04
SNTB1-203ENST00000519177 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
SNTB1-203ENST00000519177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.75■■■□□ 2.03
SNTB1-203ENST00000519177 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
SNTB1-203ENST00000519177 CCDC18Q5T9S5 1454 aa27.73■■■□□ 2.03
SNTB1-203ENST00000519177 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
SNTB1-203ENST00000519177 HECW1Q76N89 1606 aa27.72■■■□□ 2.03
SNTB1-203ENST00000519177 EHBP1L1Q8N3D4 1523 aa27.69■■■□□ 2.02
SNTB1-203ENST00000519177 ITGAEP38570 1179 aa27.69■■■□□ 2.02
SNTB1-203ENST00000519177 KIAA0556O60303 1618 aa27.66■■■□□ 2.02
SNTB1-203ENST00000519177 FAM50AQ14320 339 aaKnown RBP27.66■■■□□ 2.02
SNTB1-203ENST00000519177 DISP1Q96F81 1524 aa27.66■■■□□ 2.02
SNTB1-203ENST00000519177 FGD6Q6ZV73 1430 aa27.64■■■□□ 2.02
SNTB1-203ENST00000519177 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.01
SNTB1-203ENST00000519177 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
SNTB1-203ENST00000519177 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
SNTB1-203ENST00000519177 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
SNTB1-203ENST00000519177 SETD5Q9C0A6 1442 aa27.61■■■□□ 2.01
SNTB1-203ENST00000519177 RAB3GAP2Q9H2M9 1393 aa27.61■■■□□ 2.01
SNTB1-203ENST00000519177 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
SNTB1-203ENST00000519177 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
SNTB1-203ENST00000519177 MAGI3Q5TCQ9 1506 aa27.58■■■□□ 2.01
SNTB1-203ENST00000519177 NUP160Q12769 1436 aa27.57■■■□□ 2
SNTB1-203ENST00000519177 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
SNTB1-203ENST00000519177 ZNF316A6NFI3 1004 aaPredicted RBP27.49■■□□□ 1.99
SNTB1-203ENST00000519177 CDK13Q14004 1512 aaKnown RBP27.49■■□□□ 1.99
SNTB1-203ENST00000519177 FBLN2P98095 1184 aa27.48■■□□□ 1.99
SNTB1-203ENST00000519177 RAPGEF6Q8TEU7 1601 aa27.47■■□□□ 1.99
SNTB1-203ENST00000519177 NUP153P49790 1475 aaKnown RBP27.44■■□□□ 1.98
SNTB1-203ENST00000519177 PTPN23Q9H3S7 1636 aa27.43■■□□□ 1.98
SNTB1-203ENST00000519177 CARMIL2Q6F5E8 1435 aa27.42■■□□□ 1.98
SNTB1-203ENST00000519177 TCOF1Q13428 1488 aaKnown RBP27.41■■□□□ 1.98
SNTB1-203ENST00000519177 MAPKBP1O60336 1514 aa27.41■■□□□ 1.98
SNTB1-203ENST00000519177 DIEXFQ68CQ4 756 aaKnown RBP27.4■■□□□ 1.98
SNTB1-203ENST00000519177 JPH4Q96JJ6 628 aa27.4■■□□□ 1.98
SNTB1-203ENST00000519177 PTPRKQ15262 1439 aa27.37■■□□□ 1.97
SNTB1-203ENST00000519177 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
SNTB1-203ENST00000519177 HFM1A2PYH4 1435 aa27.35■■□□□ 1.97
SNTB1-203ENST00000519177 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
SNTB1-203ENST00000519177 CDK11AQ9UQ88 783 aaPredicted RBP27.3■■□□□ 1.96
SNTB1-203ENST00000519177 PLB1Q6P1J6 1458 aa27.29■■□□□ 1.96
SNTB1-203ENST00000519177 NAIPQ13075 1403 aa27.26■■□□□ 1.95
SNTB1-203ENST00000519177 TROQ12816 1431 aaPredicted RBP27.23■■□□□ 1.95
SNTB1-203ENST00000519177 ABCA8O94911 1581 aa27.22■■□□□ 1.95
SNTB1-203ENST00000519177 CHD1O14646 1710 aa27.21■■□□□ 1.95
SNTB1-203ENST00000519177 AKNAQ7Z591 1439 aa27.21■■□□□ 1.95
SNTB1-203ENST00000519177 UACAQ9BZF9 1416 aa27.19■■□□□ 1.94
SNTB1-203ENST00000519177 ADCY10Q96PN6 1610 aa27.18■■□□□ 1.94
SNTB1-203ENST00000519177 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
SNTB1-203ENST00000519177 GCC2Q8IWJ2 1684 aa27.16■■□□□ 1.94
SNTB1-203ENST00000519177 TIMELESSQ9UNS1 1208 aa27.13■■□□□ 1.93
SNTB1-203ENST00000519177 SHROOM2Q13796 1616 aa27.1■■□□□ 1.93
SNTB1-203ENST00000519177 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
SNTB1-203ENST00000519177 DNMT1P26358 1616 aaKnown RBP27.09■■□□□ 1.93
SNTB1-203ENST00000519177 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
SNTB1-203ENST00000519177 DAPK1P53355 1430 aa27.08■■□□□ 1.93
SNTB1-203ENST00000519177 ATP10BO94823 1461 aa27.08■■□□□ 1.92
SNTB1-203ENST00000519177 PTPRGP23470 1445 aa27.07■■□□□ 1.92
SNTB1-203ENST00000519177 KIF14Q15058 1648 aa27.07■■□□□ 1.92
SNTB1-203ENST00000519177 CHIC2Q9UKJ5 165 aa27.06■■□□□ 1.92
SNTB1-203ENST00000519177 ROCK1Q13464 1354 aa27.06■■□□□ 1.92
SNTB1-203ENST00000519177 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
SNTB1-203ENST00000519177 GPATCH8Q9UKJ3 1502 aaKnown RBP27.05■■□□□ 1.92
SNTB1-203ENST00000519177 ABCC5O15440 1437 aa27.04■■□□□ 1.92
SNTB1-203ENST00000519177 NEUROD1Q13562 356 aa27.02■■□□□ 1.92
SNTB1-203ENST00000519177 PLEKHD1A6NEE1 506 aa27.02■■□□□ 1.92
SNTB1-203ENST00000519177 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms