RNA–Protein interactions for RNA: ENST00000518607.1

EFCAB2-214, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-214ENST00000518607 PRG4Q92954 1404 aaPredicted RBP38.25■■■■□ 3.71
EFCAB2-214ENST00000518607 JPH4Q96JJ6 628 aa38.21■■■■□ 3.71
EFCAB2-214ENST00000518607 KIAA0586Q9BVV6 1533 aa38.17■■■■□ 3.7
EFCAB2-214ENST00000518607 CARMIL1Q5VZK9 1371 aa38.14■■■■□ 3.7
EFCAB2-214ENST00000518607 IQGAP2Q13576 1575 aa37.91■■■■□ 3.66
EFCAB2-214ENST00000518607 RAPGEF2Q9Y4G8 1499 aa37.9■■■■□ 3.66
EFCAB2-214ENST00000518607 ADCY10Q96PN6 1610 aa37.82■■■■□ 3.64
EFCAB2-214ENST00000518607 CARMIL2Q6F5E8 1435 aa37.79■■■■□ 3.64
EFCAB2-214ENST00000518607 MAPKBP1O60336 1514 aa37.72■■■■□ 3.63
EFCAB2-214ENST00000518607 KIF13AQ9H1H9 1805 aa37.72■■■■□ 3.63
EFCAB2-214ENST00000518607 NPM1P06748 294 aaKnown RBP eCLIP37.7■■■■□ 3.63
EFCAB2-214ENST00000518607 PTPRGP23470 1445 aa37.7■■■■□ 3.62
EFCAB2-214ENST00000518607 TNIKQ9UKE5 1360 aa37.69■■■■□ 3.62
EFCAB2-214ENST00000518607 UGGT2Q9NYU1 1516 aa37.66■■■■□ 3.62
EFCAB2-214ENST00000518607 CTTNBP2Q8WZ74 1663 aa37.66■■■■□ 3.62
EFCAB2-214ENST00000518607 DISP1Q96F81 1524 aa37.64■■■■□ 3.62
EFCAB2-214ENST00000518607 PRXQ9BXM0 1461 aa37.6■■■■□ 3.61
EFCAB2-214ENST00000518607 ABCC10Q5T3U5 1492 aa37.58■■■■□ 3.61
EFCAB2-214ENST00000518607 KIAA0556O60303 1618 aa37.57■■■■□ 3.6
EFCAB2-214ENST00000518607 DIP2BQ9P265 1576 aa37.55■■■■□ 3.6
EFCAB2-214ENST00000518607 TTBK1Q5TCY1 1321 aaPredicted RBP37.54■■■■□ 3.6
EFCAB2-214ENST00000518607 ABCC2Q92887 1545 aa37.51■■■■□ 3.59
EFCAB2-214ENST00000518607 UHRF1BP1LA0JNW5 1464 aa37.49■■■■□ 3.59
EFCAB2-214ENST00000518607 UACAQ9BZF9 1416 aa37.45■■■■□ 3.59
EFCAB2-214ENST00000518607 FAM69CQ0P6D2 419 aa37.45■■■■□ 3.59
EFCAB2-214ENST00000518607 GOLGA3Q08378 1498 aa37.41■■■■□ 3.58
EFCAB2-214ENST00000518607 EEA1Q15075 1411 aa37.37■■■■□ 3.57
EFCAB2-214ENST00000518607 CSRNP3Q8WYN3 585 aa37.32■■■■□ 3.56
EFCAB2-214ENST00000518607 PLB1Q6P1J6 1458 aa37.31■■■■□ 3.56
EFCAB2-214ENST00000518607 KDM5BQ9UGL1 1544 aa37.31■■■■□ 3.56
EFCAB2-214ENST00000518607 ASXL2Q76L83 1435 aa37.3■■■■□ 3.56
EFCAB2-214ENST00000518607 ZCCHC11Q5TAX3 1644 aaKnown RBP37.25■■■■□ 3.55
EFCAB2-214ENST00000518607 TSPOAP1O95153 1857 aa37.24■■■■□ 3.55
EFCAB2-214ENST00000518607 GLI2P10070 1586 aa37.2■■■■□ 3.55
EFCAB2-214ENST00000518607 ABCA8O94911 1581 aa37.17■■■■□ 3.54
EFCAB2-214ENST00000518607 KDM6BO15054 1643 aa37.12■■■■□ 3.53
EFCAB2-214ENST00000518607 SAMD9Q5K651 1589 aa37.1■■■■□ 3.53
EFCAB2-214ENST00000518607 EPRSP07814 1512 aaKnown RBP37.09■■■■□ 3.53
EFCAB2-214ENST00000518607 KIF21BO75037 1637 aa37.07■■■■□ 3.53
EFCAB2-214ENST00000518607 PPRC1Q5VV67 1664 aaKnown RBP37.05■■■■□ 3.52
EFCAB2-214ENST00000518607 WDR7Q9Y4E6 1490 aa37.05■■■■□ 3.52
EFCAB2-214ENST00000518607 MAP3K4Q9Y6R4 1608 aa37.03■■■■□ 3.52
EFCAB2-214ENST00000518607 FAM9AQ8IZU1 332 aaPredicted RBP37.02■■■■□ 3.52
EFCAB2-214ENST00000518607 CHIC1Q5VXU3 224 aa36.96■■■■□ 3.51
EFCAB2-214ENST00000518607 P3H3Q8IVL6 736 aa36.95■■■■□ 3.51
EFCAB2-214ENST00000518607 TEX14Q8IWB6 1497 aa36.9■■■■□ 3.5
EFCAB2-214ENST00000518607 RAPGEF6Q8TEU7 1601 aa36.88■■■■□ 3.49
EFCAB2-214ENST00000518607 AEBP2Q6ZN18 517 aaPredicted RBP36.87■■■■□ 3.49
EFCAB2-214ENST00000518607 EFCAB5A4FU69 1503 aa36.84■■■■□ 3.49
EFCAB2-214ENST00000518607 CFAP43Q8NDM7 1665 aa36.83■■■■□ 3.49
EFCAB2-214ENST00000518607 ATP10BO94823 1461 aa36.8■■■■□ 3.48
EFCAB2-214ENST00000518607 FHOD3Q2V2M9 1422 aa36.79■■■■□ 3.48
EFCAB2-214ENST00000518607 RANGAP1P46060 587 aaPredicted RBP36.78■■■■□ 3.48
EFCAB2-214ENST00000518607 ARID3CA6NKF2 412 aa36.74■■■■□ 3.47
EFCAB2-214ENST00000518607 KCNH8Q96L42 1107 aa36.73■■■■□ 3.47
EFCAB2-214ENST00000518607 MAGI3Q5TCQ9 1506 aa36.73■■■■□ 3.47
EFCAB2-214ENST00000518607 CD109Q6YHK3 1445 aa36.72■■■■□ 3.47
EFCAB2-214ENST00000518607 NUP153P49790 1475 aaKnown RBP36.69■■■■□ 3.46
EFCAB2-214ENST00000518607 COL17A1Q9UMD9 1497 aaPredicted RBP36.67■■■■□ 3.46
EFCAB2-214ENST00000518607 UBTFP17480 764 aaKnown RBP36.63■■■■□ 3.45
EFCAB2-214ENST00000518607 ABCA9Q8IUA7 1624 aa36.61■■■■□ 3.45
EFCAB2-214ENST00000518607 EHMT2Q96KQ7 1210 aa36.58■■■■□ 3.45
EFCAB2-214ENST00000518607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.57■■■■□ 3.44
EFCAB2-214ENST00000518607 HNRNPUL2Q1KMD3 747 aaKnown RBP36.57■■■■□ 3.44
EFCAB2-214ENST00000518607 ARHGAP35Q9NRY4 1499 aa36.48■■■■□ 3.43
EFCAB2-214ENST00000518607 FMN1Q68DA7 1419 aa36.46■■■■□ 3.43
EFCAB2-214ENST00000518607 ARAP3Q8WWN8 1544 aa36.43■■■■□ 3.42
EFCAB2-214ENST00000518607 HECW1Q76N89 1606 aa36.41■■■■□ 3.42
EFCAB2-214ENST00000518607 KDM4FA0A1W2PPD8 638 aa36.41■■■■□ 3.42
EFCAB2-214ENST00000518607 PLEKHD1A6NEE1 506 aa36.39■■■■□ 3.42
EFCAB2-214ENST00000518607 PHLDB1Q86UU1 1377 aa36.39■■■■□ 3.42
EFCAB2-214ENST00000518607 CDK13Q14004 1512 aaKnown RBP36.37■■■■□ 3.41
EFCAB2-214ENST00000518607 NEO1Q92859 1461 aa36.37■■■■□ 3.41
EFCAB2-214ENST00000518607 ADGRL1O94910 1474 aa36.34■■■■□ 3.41
EFCAB2-214ENST00000518607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.29■■■■□ 3.4
EFCAB2-214ENST00000518607 TTC37Q6PGP7 1564 aa36.27■■■■□ 3.4
EFCAB2-214ENST00000518607 CFAP74Q9C0B2 1584 aa36.26■■■■□ 3.39
EFCAB2-214ENST00000518607 ATP1B4Q9UN42 357 aaPredicted RBP36.21■■■■□ 3.39
EFCAB2-214ENST00000518607 FRMPD1Q5SYB0 1578 aa36.18■■■■□ 3.38
EFCAB2-214ENST00000518607 FANCAO15360 1455 aa36.18■■■■□ 3.38
EFCAB2-214ENST00000518607 LRRIQ1Q96JM4 1722 aa36.15■■■■□ 3.38
EFCAB2-214ENST00000518607 CDK11AQ9UQ88 783 aaPredicted RBP36.14■■■■□ 3.38
EFCAB2-214ENST00000518607 PCF11O94913 1555 aaKnown RBP36.14■■■■□ 3.38
EFCAB2-214ENST00000518607 AKNAQ7Z591 1439 aa36.11■■■■□ 3.37
EFCAB2-214ENST00000518607 RAPGEF3O95398 923 aa36.11■■■■□ 3.37
EFCAB2-214ENST00000518607 KIF14Q15058 1648 aa36.11■■■■□ 3.37
EFCAB2-214ENST00000518607 CASKIN1Q8WXD9 1431 aa36.08■■■■□ 3.37
EFCAB2-214ENST00000518607 RICTORQ6R327 1708 aa36.08■■■■□ 3.37
EFCAB2-214ENST00000518607 DENND4BO75064 1496 aaPredicted RBP36.08■■■■□ 3.37
EFCAB2-214ENST00000518607 MYO5CQ9NQX4 1742 aa36.08■■■■□ 3.37
EFCAB2-214ENST00000518607 CCDC18Q5T9S5 1454 aa36.07■■■■□ 3.37
EFCAB2-214ENST00000518607 TROQ12816 1431 aaPredicted RBP36.07■■■■□ 3.36
EFCAB2-214ENST00000518607 CLIP1P30622 1438 aa36.06■■■■□ 3.36
EFCAB2-214ENST00000518607 PLCH2O75038 1416 aa36.04■■■■□ 3.36
EFCAB2-214ENST00000518607 FYCO1Q9BQS8 1478 aa36.01■■■■□ 3.36
EFCAB2-214ENST00000518607 ARHGEF40Q8TER5 1519 aa36.01■■■■□ 3.36
EFCAB2-214ENST00000518607 ZMYM4Q5VZL5 1548 aa35.98■■■■□ 3.35
EFCAB2-214ENST00000518607 POGZQ7Z3K3 1410 aa35.9■■■■□ 3.34
EFCAB2-214ENST00000518607 ARHGAP5Q13017 1502 aa35.88■■■■□ 3.33
EFCAB2-214ENST00000518607 SCAPERQ9BY12 1400 aa35.87■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms