RNA–Protein interactions for RNA: ENST00000518607.1

EFCAB2-214, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-214ENST00000518607 NISCHQ9Y2I1 1504 aa54.96■■■■■ 6.39
EFCAB2-214ENST00000518607 CCDC180Q9P1Z9 1646 aa49.24■■■■■ 5.47
EFCAB2-214ENST00000518607 ABCC9O60706 1549 aa48.63■■■■■ 5.38
EFCAB2-214ENST00000518607 RB1CC1Q8TDY2 1594 aa46.6■■■■■ 5.05
EFCAB2-214ENST00000518607 NACADO15069 1562 aa46.39■■■■■ 5.02
EFCAB2-214ENST00000518607 DCAF8L2P0C7V8 631 aa46.03■■■■■ 4.96
EFCAB2-214ENST00000518607 MYO15BQ96JP2 1530 aa45.93■■■■■ 4.94
EFCAB2-214ENST00000518607 ZCCHC6Q5VYS8 1495 aaKnown RBP45.69■■■■■ 4.91
EFCAB2-214ENST00000518607 UNC13AQ9UPW8 1703 aa45.55■■■■■ 4.88
EFCAB2-214ENST00000518607 DCAF1Q9Y4B6 1507 aa45.49■■■■■ 4.87
EFCAB2-214ENST00000518607 PABPN1Q86U42 306 aaKnown RBP eCLIP45.26■■■■■ 4.84
EFCAB2-214ENST00000518607 BICRAQ9NZM4 1560 aa45.16■■■■■ 4.82
EFCAB2-214ENST00000518607 DNAJC5BQ9UF47 199 aa45.08■■■■■ 4.81
EFCAB2-214ENST00000518607 SCRIBQ14160 1630 aa44.82■■■■■ 4.77
EFCAB2-214ENST00000518607 SHROOM4Q9ULL8 1493 aa44.74■■■■■ 4.75
EFCAB2-214ENST00000518607 EIF4G1Q04637 1599 aaKnown RBP44.05■■■■■ 4.64
EFCAB2-214ENST00000518607 CC2D2AQ9P2K1 1620 aa44.02■■■■■ 4.64
EFCAB2-214ENST00000518607 CECR2Q9BXF3 1484 aa43.79■■■■■ 4.6
EFCAB2-214ENST00000518607 SMARCA4P51532 1647 aa42.82■■■■■ 4.44
EFCAB2-214ENST00000518607 NCAPD3P42695 1498 aa42.75■■■■■ 4.43
EFCAB2-214ENST00000518607 ATAD2BQ9ULI0 1458 aa42.68■■■■■ 4.42
EFCAB2-214ENST00000518607 BAZ1AQ9NRL2 1556 aaPredicted RBP42.68■■■■■ 4.42
EFCAB2-214ENST00000518607 SMARCA2P51531 1590 aa42.67■■■■■ 4.42
EFCAB2-214ENST00000518607 HMGXB3Q12766 1538 aa42.57■■■■■ 4.41
EFCAB2-214ENST00000518607 PEG3Q9GZU2 1588 aa42.42■■■■■ 4.38
EFCAB2-214ENST00000518607 BAZ1BQ9UIG0 1483 aaKnown RBP42.34■■■■■ 4.37
EFCAB2-214ENST00000518607 MROH2BQ7Z745 1585 aa42.33■■■■■ 4.37
EFCAB2-214ENST00000518607 ERCC6Q03468 1493 aa42.02■■■■■ 4.32
EFCAB2-214ENST00000518607 NESP48681 1621 aa41.9■■■■■ 4.3
EFCAB2-214ENST00000518607 WIZO95785 1651 aa41.87■■■■■ 4.29
EFCAB2-214ENST00000518607 CUX2O14529 1486 aa41.82■■■■■ 4.29
EFCAB2-214ENST00000518607 LAMC3Q9Y6N6 1575 aa41.8■■■■■ 4.28
EFCAB2-214ENST00000518607 RSF1Q96T23 1441 aaPredicted RBP41.61■■■■■ 4.25
EFCAB2-214ENST00000518607 PDS5BQ9NTI5 1447 aa41.49■■■■■ 4.23
EFCAB2-214ENST00000518607 THOC2Q8NI27 1593 aaKnown RBP41.49■■■■■ 4.23
EFCAB2-214ENST00000518607 KIF21AQ7Z4S6 1674 aa41.47■■■■■ 4.23
EFCAB2-214ENST00000518607 CADPSQ9ULU8 1353 aa41.47■■■■■ 4.23
EFCAB2-214ENST00000518607 TOP2AP11388 1531 aaKnown RBP41.42■■■■■ 4.22
EFCAB2-214ENST00000518607 DNAJC5Q9H3Z4 198 aa41.12■■■■■ 4.17
EFCAB2-214ENST00000518607 CFTRP13569 1480 aa41.12■■■■■ 4.17
EFCAB2-214ENST00000518607 MRC2Q9UBG0 1479 aa41.12■■■■■ 4.17
EFCAB2-214ENST00000518607 CEP164Q9UPV0 1460 aa41.06■■■■■ 4.16
EFCAB2-214ENST00000518607 WDR62O43379 1518 aa41.03■■■■■ 4.16
EFCAB2-214ENST00000518607 FANCD2Q9BXW9 1451 aa41.02■■■■■ 4.16
EFCAB2-214ENST00000518607 PRDM2Q13029 1718 aa40.89■■■■■ 4.14
EFCAB2-214ENST00000518607 CCDC88BA6NC98 1476 aa40.86■■■■■ 4.13
EFCAB2-214ENST00000518607 URB2Q14146 1524 aaKnown RBP40.64■■■■■ 4.1
EFCAB2-214ENST00000518607 TOPBP1Q92547 1522 aa40.3■■■■■ 4.04
EFCAB2-214ENST00000518607 ABCC8Q09428 1581 aa40.28■■■■■ 4.04
EFCAB2-214ENST00000518607 DNMBPQ6XZF7 1577 aa40.24■■■■■ 4.03
EFCAB2-214ENST00000518607 IFT140Q96RY7 1462 aa40.21■■■■■ 4.03
EFCAB2-214ENST00000518607 ZNF608Q9ULD9 1512 aaPredicted RBP40.04■■■■■ 4
EFCAB2-214ENST00000518607 SUPT5HO00267 1087 aaKnown RBP40.01■■■■■ 4
EFCAB2-214ENST00000518607 EIF4G3O43432 1585 aaKnown RBP39.94■■■■□ 3.98
EFCAB2-214ENST00000518607 TARBP1Q13395 1621 aaKnown RBP39.92■■■■□ 3.98
EFCAB2-214ENST00000518607 POLA1P09884 1462 aaPredicted RBP39.92■■■■□ 3.98
EFCAB2-214ENST00000518607 OSCARQ8IYS5 282 aa39.87■■■■□ 3.97
EFCAB2-214ENST00000518607 CUX1P39880 1505 aa39.77■■■■□ 3.96
EFCAB2-214ENST00000518607 FGD5Q6ZNL6 1462 aa39.73■■■■□ 3.95
EFCAB2-214ENST00000518607 AQRO60306 1485 aaKnown RBP eCLIP39.71■■■■□ 3.95
EFCAB2-214ENST00000518607 RAD54L2Q9Y4B4 1467 aa39.7■■■■□ 3.95
EFCAB2-214ENST00000518607 SOGA1O94964 1423 aa39.7■■■■□ 3.95
EFCAB2-214ENST00000518607 WDR97A6NE52 1622 aa39.65■■■■□ 3.94
EFCAB2-214ENST00000518607 CHD1O14646 1710 aa39.55■■■■□ 3.92
EFCAB2-214ENST00000518607 TDRD9Q8NDG6 1382 aaKnown RBP39.53■■■■□ 3.92
EFCAB2-214ENST00000518607 TRIM41Q8WV44 630 aa39.5■■■■□ 3.91
EFCAB2-214ENST00000518607 SNAPC4Q5SXM2 1469 aa39.4■■■■□ 3.9
EFCAB2-214ENST00000518607 RIMBP3CA6NJZ7 1639 aa39.4■■■■□ 3.9
EFCAB2-214ENST00000518607 RIMBP3BA6NNM3 1639 aa39.4■■■■□ 3.9
EFCAB2-214ENST00000518607 RIMBP3Q9UFD9 1639 aa39.4■■■■□ 3.9
EFCAB2-214ENST00000518607 GRIN2BQ13224 1484 aa39.36■■■■□ 3.89
EFCAB2-214ENST00000518607 MAGI1Q96QZ7 1491 aaPredicted RBP39.35■■■■□ 3.89
EFCAB2-214ENST00000518607 FBLN2P98095 1184 aa39.33■■■■□ 3.89
EFCAB2-214ENST00000518607 ABCA10Q8WWZ4 1543 aa39.33■■■■□ 3.89
EFCAB2-214ENST00000518607 BIVM-ERCC5R4GMW8 1640 aa39.32■■■■□ 3.88
EFCAB2-214ENST00000518607 ARHGEF11O15085 1522 aa39.31■■■■□ 3.88
EFCAB2-214ENST00000518607 TOP2BQ02880 1626 aa39.3■■■■□ 3.88
EFCAB2-214ENST00000518607 PBRM1Q86U86 1689 aa39.3■■■■□ 3.88
EFCAB2-214ENST00000518607 WRNQ14191 1432 aaPredicted RBP eCLIP39.28■■■■□ 3.88
EFCAB2-214ENST00000518607 GAPVD1Q14C86 1478 aa39.27■■■■□ 3.88
EFCAB2-214ENST00000518607 ABCA5Q8WWZ7 1642 aa39.27■■■■□ 3.88
EFCAB2-214ENST00000518607 SYNJ1O43426 1573 aa39.23■■■■□ 3.87
EFCAB2-214ENST00000518607 SYNJ2O15056 1496 aa39.18■■■■□ 3.86
EFCAB2-214ENST00000518607 CHMP7Q8WUX9 453 aaPredicted RBP39.15■■■■□ 3.86
EFCAB2-214ENST00000518607 CLASP1Q7Z460 1538 aa39.09■■■■□ 3.85
EFCAB2-214ENST00000518607 ADAMTS12P58397 1594 aa38.95■■■■□ 3.83
EFCAB2-214ENST00000518607 ARAP1Q96P48 1450 aa38.94■■■■□ 3.82
EFCAB2-214ENST00000518607 CYB5RLQ6IPT4 315 aa38.87■■■■□ 3.81
EFCAB2-214ENST00000518607 ERICH3Q5RHP9 1530 aa38.87■■■■□ 3.81
EFCAB2-214ENST00000518607 GRIN2AQ12879 1464 aa38.86■■■■□ 3.81
EFCAB2-214ENST00000518607 FHAD1B1AJZ9 1412 aa38.8■■■■□ 3.8
EFCAB2-214ENST00000518607 NUP160Q12769 1436 aa38.71■■■■□ 3.79
EFCAB2-214ENST00000518607 CEP170Q5SW79 1584 aa38.7■■■■□ 3.79
EFCAB2-214ENST00000518607 SHROOM2Q13796 1616 aa38.52■■■■□ 3.76
EFCAB2-214ENST00000518607 KIF27Q86VH2 1401 aa38.51■■■■□ 3.76
EFCAB2-214ENST00000518607 ERCC6L2Q5T890 1561 aa38.45■■■■□ 3.75
EFCAB2-214ENST00000518607 CUL7Q14999 1698 aa38.44■■■■□ 3.74
EFCAB2-214ENST00000518607 RUSC2Q8N2Y8 1516 aa38.39■■■■□ 3.74
EFCAB2-214ENST00000518607 IGF1RP08069 1367 aa38.36■■■■□ 3.73
EFCAB2-214ENST00000518607 TRHP20396 242 aaPredicted RBP38.31■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms