RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 KIAA0586Q9BVV6 1533 aa36.85■■■■□ 3.49
VEGFA-217ENST00000518538 ARAP1Q96P48 1450 aa36.82■■■■□ 3.49
VEGFA-217ENST00000518538 PRXQ9BXM0 1461 aa36.81■■■■□ 3.48
VEGFA-217ENST00000518538 CSRNP3Q8WYN3 585 aa36.77■■■■□ 3.48
VEGFA-217ENST00000518538 JPH4Q96JJ6 628 aa36.77■■■■□ 3.48
VEGFA-217ENST00000518538 CYB5RLQ6IPT4 315 aa36.74■■■■□ 3.47
VEGFA-217ENST00000518538 ERCC6L2Q5T890 1561 aa36.73■■■■□ 3.47
VEGFA-217ENST00000518538 PRG4Q92954 1404 aaPredicted RBP36.7■■■■□ 3.47
VEGFA-217ENST00000518538 IQGAP2Q13576 1575 aa36.65■■■■□ 3.46
VEGFA-217ENST00000518538 FAM9AQ8IZU1 332 aaPredicted RBP36.64■■■■□ 3.46
VEGFA-217ENST00000518538 CTTNBP2Q8WZ74 1663 aa36.54■■■■□ 3.44
VEGFA-217ENST00000518538 KIF21BO75037 1637 aa36.47■■■■□ 3.43
VEGFA-217ENST00000518538 UGGT2Q9NYU1 1516 aa36.46■■■■□ 3.43
VEGFA-217ENST00000518538 CARMIL2Q6F5E8 1435 aa36.44■■■■□ 3.42
VEGFA-217ENST00000518538 DISP1Q96F81 1524 aa36.38■■■■□ 3.41
VEGFA-217ENST00000518538 TNIKQ9UKE5 1360 aa36.32■■■■□ 3.4
VEGFA-217ENST00000518538 KIAA0556O60303 1618 aa36.3■■■■□ 3.4
VEGFA-217ENST00000518538 PTPRGP23470 1445 aa36.27■■■■□ 3.4
VEGFA-217ENST00000518538 GOLGA3Q08378 1498 aa36.26■■■■□ 3.4
VEGFA-217ENST00000518538 TTBK1Q5TCY1 1321 aaPredicted RBP36.16■■■■□ 3.38
VEGFA-217ENST00000518538 ADCY10Q96PN6 1610 aa36.14■■■■□ 3.38
VEGFA-217ENST00000518538 EHMT2Q96KQ7 1210 aa36.13■■■■□ 3.37
VEGFA-217ENST00000518538 UBTFP17480 764 aaKnown RBP36.12■■■■□ 3.37
VEGFA-217ENST00000518538 SAMD9Q5K651 1589 aa36.09■■■■□ 3.37
VEGFA-217ENST00000518538 UACAQ9BZF9 1416 aa36.05■■■■□ 3.36
VEGFA-217ENST00000518538 UHRF1BP1LA0JNW5 1464 aa36.03■■■■□ 3.36
VEGFA-217ENST00000518538 NPM1P06748 294 aaKnown RBP eCLIP36■■■■□ 3.35
VEGFA-217ENST00000518538 ABCC2Q92887 1545 aa35.99■■■■□ 3.35
VEGFA-217ENST00000518538 RANGAP1P46060 587 aaPredicted RBP35.99■■■■□ 3.35
VEGFA-217ENST00000518538 P3H3Q8IVL6 736 aa35.99■■■■□ 3.35
VEGFA-217ENST00000518538 EFCAB5A4FU69 1503 aa35.96■■■■□ 3.35
VEGFA-217ENST00000518538 TRHP20396 242 aaPredicted RBP35.95■■■■□ 3.35
VEGFA-217ENST00000518538 PLB1Q6P1J6 1458 aa35.92■■■■□ 3.34
VEGFA-217ENST00000518538 MAPKBP1O60336 1514 aa35.91■■■■□ 3.34
VEGFA-217ENST00000518538 ABCA8O94911 1581 aa35.9■■■■□ 3.34
VEGFA-217ENST00000518538 FHOD3Q2V2M9 1422 aa35.87■■■■□ 3.33
VEGFA-217ENST00000518538 KDM5BQ9UGL1 1544 aa35.85■■■■□ 3.33
VEGFA-217ENST00000518538 ARHGAP35Q9NRY4 1499 aa35.78■■■■□ 3.32
VEGFA-217ENST00000518538 ZCCHC11Q5TAX3 1644 aaKnown RBP35.75■■■■□ 3.31
VEGFA-217ENST00000518538 ABCC10Q5T3U5 1492 aa35.73■■■■□ 3.31
VEGFA-217ENST00000518538 RAPGEF6Q8TEU7 1601 aa35.72■■■■□ 3.31
VEGFA-217ENST00000518538 ASXL2Q76L83 1435 aa35.71■■■■□ 3.31
VEGFA-217ENST00000518538 DIP2BQ9P265 1576 aa35.66■■■■□ 3.3
VEGFA-217ENST00000518538 KIF13AQ9H1H9 1805 aa35.66■■■■□ 3.3
VEGFA-217ENST00000518538 FMN1Q68DA7 1419 aa35.62■■■■□ 3.29
VEGFA-217ENST00000518538 FAM69CQ0P6D2 419 aa35.61■■■■□ 3.29
VEGFA-217ENST00000518538 ATP10BO94823 1461 aa35.6■■■■□ 3.29
VEGFA-217ENST00000518538 NUP153P49790 1475 aaKnown RBP35.6■■■■□ 3.29
VEGFA-217ENST00000518538 CLIP1P30622 1438 aa35.59■■■■□ 3.29
VEGFA-217ENST00000518538 WDR7Q9Y4E6 1490 aa35.55■■■■□ 3.28
VEGFA-217ENST00000518538 ARID3CA6NKF2 412 aa35.55■■■■□ 3.28
VEGFA-217ENST00000518538 LOC105371045A0A1W2PR82 267 aa35.53■■■■□ 3.28
VEGFA-217ENST00000518538 EPRSP07814 1512 aaKnown RBP35.5■■■■□ 3.27
VEGFA-217ENST00000518538 GLI2P10070 1586 aa35.5■■■■□ 3.27
VEGFA-217ENST00000518538 CEP162Q5TB80 1403 aa35.46■■■■□ 3.27
VEGFA-217ENST00000518538 HECW1Q76N89 1606 aa35.44■■■■□ 3.26
VEGFA-217ENST00000518538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.42■■■■□ 3.26
VEGFA-217ENST00000518538 HNRNPUL2Q1KMD3 747 aaKnown RBP35.42■■■■□ 3.26
VEGFA-217ENST00000518538 CASKIN1Q8WXD9 1431 aa35.35■■■■□ 3.25
VEGFA-217ENST00000518538 KCNH8Q96L42 1107 aa35.35■■■■□ 3.25
VEGFA-217ENST00000518538 ATP1B4Q9UN42 357 aaPredicted RBP35.35■■■■□ 3.25
VEGFA-217ENST00000518538 PCF11O94913 1555 aaKnown RBP35.34■■■■□ 3.25
VEGFA-217ENST00000518538 CDK13Q14004 1512 aaKnown RBP35.34■■■■□ 3.25
VEGFA-217ENST00000518538 MAP3K4Q9Y6R4 1608 aa35.33■■■■□ 3.25
VEGFA-217ENST00000518538 TSPOAP1O95153 1857 aa35.3■■■■□ 3.24
VEGFA-217ENST00000518538 PLEKHD1A6NEE1 506 aa35.29■■■■□ 3.24
VEGFA-217ENST00000518538 FYCO1Q9BQS8 1478 aa35.29■■■■□ 3.24
VEGFA-217ENST00000518538 PPRC1Q5VV67 1664 aaKnown RBP35.24■■■■□ 3.23
VEGFA-217ENST00000518538 CFAP43Q8NDM7 1665 aa35.24■■■■□ 3.23
VEGFA-217ENST00000518538 LRRIQ1Q96JM4 1722 aa35.23■■■■□ 3.23
VEGFA-217ENST00000518538 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
VEGFA-217ENST00000518538 CD109Q6YHK3 1445 aa35.21■■■■□ 3.23
VEGFA-217ENST00000518538 ABCA9Q8IUA7 1624 aa35.19■■■■□ 3.22
VEGFA-217ENST00000518538 TEX14Q8IWB6 1497 aa35.17■■■■□ 3.22
VEGFA-217ENST00000518538 CDK11AQ9UQ88 783 aaPredicted RBP35.17■■■■□ 3.22
VEGFA-217ENST00000518538 MAGI3Q5TCQ9 1506 aa35.15■■■■□ 3.22
VEGFA-217ENST00000518538 TROQ12816 1431 aaPredicted RBP35.08■■■■□ 3.21
VEGFA-217ENST00000518538 KDM6BO15054 1643 aa35.06■■■■□ 3.2
VEGFA-217ENST00000518538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.06■■■■□ 3.21e-6■■□□□ 13.2
VEGFA-217ENST00000518538 VPS8Q8N3P4 1428 aa35.04■■■■□ 3.2
VEGFA-217ENST00000518538 TTC37Q6PGP7 1564 aa35■■■■□ 3.19
VEGFA-217ENST00000518538 KIF14Q15058 1648 aa35■■■■□ 3.19
VEGFA-217ENST00000518538 COL17A1Q9UMD9 1497 aaPredicted RBP34.91■■■■□ 3.18
VEGFA-217ENST00000518538 NEO1Q92859 1461 aa34.9■■■■□ 3.18
VEGFA-217ENST00000518538 PHLDB1Q86UU1 1377 aa34.9■■■■□ 3.18
VEGFA-217ENST00000518538 PLCH2O75038 1416 aa34.86■■■■□ 3.17
VEGFA-217ENST00000518538 ARAP3Q8WWN8 1544 aa34.85■■■■□ 3.17
VEGFA-217ENST00000518538 MTUS2Q5JR59 1369 aa34.84■■■■□ 3.17
VEGFA-217ENST00000518538 FANCAO15360 1455 aa34.84■■■■□ 3.17
VEGFA-217ENST00000518538 MYO5CQ9NQX4 1742 aa34.83■■■■□ 3.17
VEGFA-217ENST00000518538 CFAP74Q9C0B2 1584 aa34.83■■■■□ 3.17
VEGFA-217ENST00000518538 TIAM1Q13009 1591 aa34.8■■■■□ 3.16
VEGFA-217ENST00000518538 EHBP1L1Q8N3D4 1523 aa34.8■■■■□ 3.16
VEGFA-217ENST00000518538 AKNAQ7Z591 1439 aa34.76■■■■□ 3.16
VEGFA-217ENST00000518538 MAP3K1Q13233 1512 aa34.75■■■■□ 3.15
VEGFA-217ENST00000518538 EFCAB2Q5VUJ9 269 aa34.71■■■■□ 3.15
VEGFA-217ENST00000518538 ARHGAP5Q13017 1502 aa34.71■■■■□ 3.15
VEGFA-217ENST00000518538 PREX2Q70Z35 1606 aa34.7■■■■□ 3.15
VEGFA-217ENST00000518538 CDC42BPBQ9Y5S2 1711 aa34.67■■■■□ 3.14
VEGFA-217ENST00000518538 CDC42BPAQ5VT25 1732 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms