RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
PVT1-207ENST00000518528 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
PVT1-207ENST00000518528 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
PVT1-207ENST00000518528 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
PVT1-207ENST00000518528 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
PVT1-207ENST00000518528 KDM6BO15054 1643 aa15.94■□□□□ 0.14
PVT1-207ENST00000518528 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
PVT1-207ENST00000518528 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
PVT1-207ENST00000518528 KIAA0586Q9BVV6 1533 aa15.88■□□□□ 0.13
PVT1-207ENST00000518528 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
PVT1-207ENST00000518528 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
PVT1-207ENST00000518528 PTPRGP23470 1445 aa15.86■□□□□ 0.13
PVT1-207ENST00000518528 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
PVT1-207ENST00000518528 PLB1Q6P1J6 1458 aa15.8■□□□□ 0.12
PVT1-207ENST00000518528 CARMIL2Q6F5E8 1435 aa15.8■□□□□ 0.12
PVT1-207ENST00000518528 IGF1RP08069 1367 aa15.79■□□□□ 0.12
PVT1-207ENST00000518528 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
PVT1-207ENST00000518528 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
PVT1-207ENST00000518528 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
PVT1-207ENST00000518528 ADGRL1O94910 1474 aa15.77■□□□□ 0.11
PVT1-207ENST00000518528 ASXL2Q76L83 1435 aa15.77■□□□□ 0.11
PVT1-207ENST00000518528 TSPOAP1O95153 1857 aa15.76■□□□□ 0.11
PVT1-207ENST00000518528 GLI2P10070 1586 aa15.71■□□□□ 0.11
PVT1-207ENST00000518528 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
PVT1-207ENST00000518528 TEX14Q8IWB6 1497 aa15.7■□□□□ 0.1
PVT1-207ENST00000518528 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
PVT1-207ENST00000518528 UHRF1BP1LA0JNW5 1464 aa15.69■□□□□ 0.1
PVT1-207ENST00000518528 CUL7Q14999 1698 aa15.68■□□□□ 0.1
PVT1-207ENST00000518528 EPRSP07814 1512 aaKnown RBP15.64■□□□□ 0.09
PVT1-207ENST00000518528 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
PVT1-207ENST00000518528 COL17A1Q9UMD9 1497 aaPredicted RBP15.64■□□□□ 0.09
PVT1-207ENST00000518528 KDM5BQ9UGL1 1544 aa15.6■□□□□ 0.09
PVT1-207ENST00000518528 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
PVT1-207ENST00000518528 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
PVT1-207ENST00000518528 PPRC1Q5VV67 1664 aaKnown RBP15.58■□□□□ 0.08
PVT1-207ENST00000518528 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
PVT1-207ENST00000518528 MAP3K4Q9Y6R4 1608 aa15.54■□□□□ 0.08
PVT1-207ENST00000518528 WDR7Q9Y4E6 1490 aa15.54■□□□□ 0.08
PVT1-207ENST00000518528 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
PVT1-207ENST00000518528 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
PVT1-207ENST00000518528 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
PVT1-207ENST00000518528 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
PVT1-207ENST00000518528 MAGI3Q5TCQ9 1506 aa15.49■□□□□ 0.07
PVT1-207ENST00000518528 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
PVT1-207ENST00000518528 ZCCHC11Q5TAX3 1644 aaKnown RBP15.47■□□□□ 0.07
PVT1-207ENST00000518528 KIAA0556O60303 1618 aa15.43■□□□□ 0.06
PVT1-207ENST00000518528 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
PVT1-207ENST00000518528 PHLDB1Q86UU1 1377 aa15.41■□□□□ 0.06
PVT1-207ENST00000518528 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
PVT1-207ENST00000518528 CFAP43Q8NDM7 1665 aa15.38■□□□□ 0.05
PVT1-207ENST00000518528 ARAP3Q8WWN8 1544 aa15.38■□□□□ 0.05
PVT1-207ENST00000518528 PTPRMP28827 1452 aa15.37■□□□□ 0.05
PVT1-207ENST00000518528 ABCA8O94911 1581 aa15.32■□□□□ 0.04
PVT1-207ENST00000518528 KIF21BO75037 1637 aa15.32■□□□□ 0.04
PVT1-207ENST00000518528 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
PVT1-207ENST00000518528 RAPGEF3O95398 923 aa15.32■□□□□ 0.04
PVT1-207ENST00000518528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
PVT1-207ENST00000518528 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
PVT1-207ENST00000518528 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
PVT1-207ENST00000518528 NEO1Q92859 1461 aa15.27■□□□□ 0.03
PVT1-207ENST00000518528 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.03
PVT1-207ENST00000518528 ATP10BO94823 1461 aa15.26■□□□□ 0.03
PVT1-207ENST00000518528 P3H3Q8IVL6 736 aa15.25■□□□□ 0.03
PVT1-207ENST00000518528 ADAMTSL3P82987 1691 aa15.25■□□□□ 0.03
PVT1-207ENST00000518528 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
PVT1-207ENST00000518528 POGZQ7Z3K3 1410 aa15.22■□□□□ 0.03
PVT1-207ENST00000518528 HSPA2P54652 639 aa15.21■□□□□ 0.03
PVT1-207ENST00000518528 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
PVT1-207ENST00000518528 ABCA9Q8IUA7 1624 aa15.19■□□□□ 0.02
PVT1-207ENST00000518528 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
PVT1-207ENST00000518528 DENND4BO75064 1496 aaPredicted RBP15.18■□□□□ 0.02
PVT1-207ENST00000518528 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
PVT1-207ENST00000518528 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
PVT1-207ENST00000518528 BCORL1Q5H9F3 1711 aa15.17■□□□□ 0.02
PVT1-207ENST00000518528 MADDQ8WXG6 1647 aa15.17■□□□□ 0.02
PVT1-207ENST00000518528 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
PVT1-207ENST00000518528 FANCAO15360 1455 aa15.14■□□□□ 0.01
PVT1-207ENST00000518528 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
PVT1-207ENST00000518528 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
PVT1-207ENST00000518528 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
PVT1-207ENST00000518528 ARHGEF40Q8TER5 1519 aa15.12■□□□□ 0.01
PVT1-207ENST00000518528 SOCS7O14512 581 aa15.12■□□□□ 0.01
PVT1-207ENST00000518528 MLECQ14165 292 aa15.11■□□□□ 0.01
PVT1-207ENST00000518528 FRMPD1Q5SYB0 1578 aa15.1■□□□□ 0.01
PVT1-207ENST00000518528 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
PVT1-207ENST00000518528 MAGI2Q86UL8 1455 aa15.08■□□□□ 0.01
PVT1-207ENST00000518528 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
PVT1-207ENST00000518528 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
PVT1-207ENST00000518528 EFCAB5A4FU69 1503 aa15.06■□□□□ 0
PVT1-207ENST00000518528 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
PVT1-207ENST00000518528 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
PVT1-207ENST00000518528 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
PVT1-207ENST00000518528 YEATS2Q9ULM3 1422 aa15.04■□□□□ -0
PVT1-207ENST00000518528 ILDR2Q71H61 639 aa15.04■□□□□ -0
PVT1-207ENST00000518528 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
PVT1-207ENST00000518528 ZMYM4Q5VZL5 1548 aa15.02■□□□□ -0
PVT1-207ENST00000518528 SAMD9Q5K651 1589 aa15.01□□□□□ -0.01
PVT1-207ENST00000518528 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
PVT1-207ENST00000518528 EFCAB2Q5VUJ9 269 aa14.99□□□□□ -0.01
PVT1-207ENST00000518528 ATP10AO60312 1499 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms