RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
PVT1-207ENST00000518528 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
PVT1-207ENST00000518528 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
PVT1-207ENST00000518528 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
PVT1-207ENST00000518528 A0A1B0GV90 55 aa2.91□□□□□ -1.94
PVT1-207ENST00000518528 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
PVT1-207ENST00000518528 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
PVT1-207ENST00000518528 TNP1P09430 55 aa2.87□□□□□ -1.95
PVT1-207ENST00000518528 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
PVT1-207ENST00000518528 SMIM26A0A096LP01 95 aa2.85□□□□□ -1.95
PVT1-207ENST00000518528 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
PVT1-207ENST00000518528 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
PVT1-207ENST00000518528 PSPHP1O15172 72 aa2.83□□□□□ -1.96
PVT1-207ENST00000518528 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
PVT1-207ENST00000518528 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
PVT1-207ENST00000518528 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
PVT1-207ENST00000518528 SPATA8Q6RVD6 105 aa2.82□□□□□ -1.96
PVT1-207ENST00000518528 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
PVT1-207ENST00000518528 A0A1B0GU33 70 aa2.79□□□□□ -1.96
PVT1-207ENST00000518528 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
PVT1-207ENST00000518528 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
PVT1-207ENST00000518528 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
PVT1-207ENST00000518528 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
PVT1-207ENST00000518528 ANAPC13Q9BS18 74 aa2.73□□□□□ -1.97
PVT1-207ENST00000518528 K7ERU9 68 aa2.68□□□□□ -1.98
PVT1-207ENST00000518528 SNURFQ9Y675 71 aa2.68□□□□□ -1.98
PVT1-207ENST00000518528 COA5Q86WW8 74 aa2.67□□□□□ -1.98
PVT1-207ENST00000518528 J3QR89 54 aa2.65□□□□□ -1.99
PVT1-207ENST00000518528 MT1AP04731 61 aa2.65□□□□□ -1.99
PVT1-207ENST00000518528 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
PVT1-207ENST00000518528 SERP2Q8N6R1 65 aa2.64□□□□□ -1.99
PVT1-207ENST00000518528 A8MU10 97 aa2.63□□□□□ -1.99
PVT1-207ENST00000518528 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
PVT1-207ENST00000518528 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
PVT1-207ENST00000518528 KRTAP9-4Q9BYQ2 154 aa2.61□□□□□ -1.99
PVT1-207ENST00000518528 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
PVT1-207ENST00000518528 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
PVT1-207ENST00000518528 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
PVT1-207ENST00000518528 A0A1B0GU69 56 aa2.58□□□□□ -2
PVT1-207ENST00000518528 KRTAP15-1Q3LI76 137 aa2.57□□□□□ -2
PVT1-207ENST00000518528 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
PVT1-207ENST00000518528 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
PVT1-207ENST00000518528 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
PVT1-207ENST00000518528 BRK1Q8WUW1 75 aa2.55□□□□□ -2
PVT1-207ENST00000518528 CCDC179H3BU77 68 aa2.53□□□□□ -2
PVT1-207ENST00000518528 K7ERS5 55 aa2.5□□□□□ -2.01
PVT1-207ENST00000518528 A6NED7 52 aa2.49□□□□□ -2.01
PVT1-207ENST00000518528 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
PVT1-207ENST00000518528 MT3P25713 68 aa2.48□□□□□ -2.01
PVT1-207ENST00000518528 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
PVT1-207ENST00000518528 TMEM258P61165 79 aa2.44□□□□□ -2.02
PVT1-207ENST00000518528 H7BZZ5 65 aa2.42□□□□□ -2.02
PVT1-207ENST00000518528 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
PVT1-207ENST00000518528 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
PVT1-207ENST00000518528 ROMO1P60602 79 aa2.32□□□□□ -2.04
PVT1-207ENST00000518528 UQCR11O14957 56 aa2.31□□□□□ -2.04
PVT1-207ENST00000518528 COX7CP15954 63 aa2.28□□□□□ -2.04
PVT1-207ENST00000518528 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
PVT1-207ENST00000518528 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
PVT1-207ENST00000518528 ATP5EP56381 51 aaPredicted RBP2.21□□□□□ -2.06
PVT1-207ENST00000518528 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
PVT1-207ENST00000518528 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
PVT1-207ENST00000518528 Q1T7F1 81 aa2.19□□□□□ -2.06
PVT1-207ENST00000518528 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
PVT1-207ENST00000518528 CDC42SE1Q9NRR8 79 aa2.11□□□□□ -2.07
PVT1-207ENST00000518528 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
PVT1-207ENST00000518528 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
PVT1-207ENST00000518528 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
PVT1-207ENST00000518528 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
PVT1-207ENST00000518528 INE1O15225 51 aa1.89□□□□□ -2.11
PVT1-207ENST00000518528 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
PVT1-207ENST00000518528 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
PVT1-207ENST00000518528 LCE3EQ5T5B0 92 aa1.7□□□□□ -2.14
PVT1-207ENST00000518528 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
PVT1-207ENST00000518528 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
PVT1-207ENST00000518528 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
PVT1-207ENST00000518528 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
PVT1-207ENST00000518528 PRM1P04553 51 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 122.7 ms