RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 RAPGEF2Q9Y4G8 1499 aa11.56□□□□□ -0.56
SCARNA6-201ENST00000515982 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
SCARNA6-201ENST00000515982 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
SCARNA6-201ENST00000515982 KIF21BO75037 1637 aa11.5□□□□□ -0.57
SCARNA6-201ENST00000515982 UBTFP17480 764 aaKnown RBP11.49□□□□□ -0.57
SCARNA6-201ENST00000515982 GOLGA3Q08378 1498 aa11.48□□□□□ -0.57
SCARNA6-201ENST00000515982 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
SCARNA6-201ENST00000515982 NUP160Q12769 1436 aa11.46□□□□□ -0.57
SCARNA6-201ENST00000515982 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
SCARNA6-201ENST00000515982 KIAA0586Q9BVV6 1533 aa11.44□□□□□ -0.58
SCARNA6-201ENST00000515982 LOC105371045A0A1W2PR82 267 aa11.43□□□□□ -0.58
SCARNA6-201ENST00000515982 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
SCARNA6-201ENST00000515982 CEP170Q5SW79 1584 aa11.42□□□□□ -0.58
SCARNA6-201ENST00000515982 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
SCARNA6-201ENST00000515982 CTTNBP2Q8WZ74 1663 aa11.39□□□□□ -0.59
SCARNA6-201ENST00000515982 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
SCARNA6-201ENST00000515982 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
SCARNA6-201ENST00000515982 RANGAP1P46060 587 aaPredicted RBP11.34□□□□□ -0.59
SCARNA6-201ENST00000515982 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
SCARNA6-201ENST00000515982 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.6
SCARNA6-201ENST00000515982 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
SCARNA6-201ENST00000515982 ERCC6L2Q5T890 1561 aa11.29□□□□□ -0.6
SCARNA6-201ENST00000515982 CLIP1P30622 1438 aa11.28□□□□□ -0.6
SCARNA6-201ENST00000515982 ILDR1Q86SU0 546 aaPredicted RBP11.28□□□□□ -0.6
SCARNA6-201ENST00000515982 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
SCARNA6-201ENST00000515982 EFCAB5A4FU69 1503 aa11.28□□□□□ -0.6
SCARNA6-201ENST00000515982 DISP1Q96F81 1524 aa11.27□□□□□ -0.61
SCARNA6-201ENST00000515982 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
SCARNA6-201ENST00000515982 PTPRGP23470 1445 aa11.26□□□□□ -0.61
SCARNA6-201ENST00000515982 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
SCARNA6-201ENST00000515982 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
SCARNA6-201ENST00000515982 ARHGAP35Q9NRY4 1499 aa11.24□□□□□ -0.61
SCARNA6-201ENST00000515982 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
SCARNA6-201ENST00000515982 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
SCARNA6-201ENST00000515982 KIF13AQ9H1H9 1805 aa11.23□□□□□ -0.61
SCARNA6-201ENST00000515982 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.61
SCARNA6-201ENST00000515982 FMN1Q68DA7 1419 aa11.21□□□□□ -0.61
SCARNA6-201ENST00000515982 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
SCARNA6-201ENST00000515982 UACAQ9BZF9 1416 aa11.17□□□□□ -0.62
SCARNA6-201ENST00000515982 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCARNA6-201ENST00000515982 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
SCARNA6-201ENST00000515982 UHRF1BP1LA0JNW5 1464 aa11.14□□□□□ -0.63
SCARNA6-201ENST00000515982 ABCC10Q5T3U5 1492 aa11.14□□□□□ -0.63
SCARNA6-201ENST00000515982 ABCA8O94911 1581 aa11.13□□□□□ -0.63
SCARNA6-201ENST00000515982 VPS8Q8N3P4 1428 aa11.13□□□□□ -0.63
SCARNA6-201ENST00000515982 CASKIN1Q8WXD9 1431 aa11.13□□□□□ -0.63
SCARNA6-201ENST00000515982 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
SCARNA6-201ENST00000515982 RAPGEF6Q8TEU7 1601 aa11.12□□□□□ -0.63
SCARNA6-201ENST00000515982 ABCC2Q92887 1545 aa11.11□□□□□ -0.63
SCARNA6-201ENST00000515982 APLP2Q06481 763 aa11.11□□□□□ -0.63
SCARNA6-201ENST00000515982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
SCARNA6-201ENST00000515982 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
SCARNA6-201ENST00000515982 FYCO1Q9BQS8 1478 aa11.09□□□□□ -0.63
SCARNA6-201ENST00000515982 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
SCARNA6-201ENST00000515982 MAPKBP1O60336 1514 aa11.08□□□□□ -0.64
SCARNA6-201ENST00000515982 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 ATP10BO94823 1461 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 KDM6BO15054 1643 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 HECW1Q76N89 1606 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 ADCY10Q96PN6 1610 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 PLEKHD1A6NEE1 506 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 ARID3CA6NKF2 412 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 KDM5BQ9UGL1 1544 aa11.07□□□□□ -0.64
SCARNA6-201ENST00000515982 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
SCARNA6-201ENST00000515982 CCDC18Q5T9S5 1454 aa11.06□□□□□ -0.64
SCARNA6-201ENST00000515982 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
SCARNA6-201ENST00000515982 PCF11O94913 1555 aaKnown RBP11.05□□□□□ -0.64
SCARNA6-201ENST00000515982 TSPOAP1O95153 1857 aa11.03□□□□□ -0.64
SCARNA6-201ENST00000515982 MAP3K1Q13233 1512 aa11.03□□□□□ -0.64
SCARNA6-201ENST00000515982 ZCCHC11Q5TAX3 1644 aaKnown RBP11.02□□□□□ -0.65
SCARNA6-201ENST00000515982 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
SCARNA6-201ENST00000515982 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
SCARNA6-201ENST00000515982 MTUS2Q5JR59 1369 aa10.99□□□□□ -0.65
SCARNA6-201ENST00000515982 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
SCARNA6-201ENST00000515982 LRRIQ1Q96JM4 1722 aa10.98□□□□□ -0.65
SCARNA6-201ENST00000515982 ADGRL1O94910 1474 aa10.98□□□□□ -0.65
SCARNA6-201ENST00000515982 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
SCARNA6-201ENST00000515982 TROQ12816 1431 aaPredicted RBP10.97□□□□□ -0.65
SCARNA6-201ENST00000515982 WDR7Q9Y4E6 1490 aa10.97□□□□□ -0.65
SCARNA6-201ENST00000515982 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
SCARNA6-201ENST00000515982 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
SCARNA6-201ENST00000515982 KANK4Q5T7N3 995 aaPredicted RBP10.95□□□□□ -0.66
SCARNA6-201ENST00000515982 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
SCARNA6-201ENST00000515982 EHBP1L1Q8N3D4 1523 aa10.93□□□□□ -0.66
SCARNA6-201ENST00000515982 COL17A1Q9UMD9 1497 aaPredicted RBP10.93□□□□□ -0.66
SCARNA6-201ENST00000515982 MAGI3Q5TCQ9 1506 aa10.91□□□□□ -0.66
SCARNA6-201ENST00000515982 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
SCARNA6-201ENST00000515982 KIF14Q15058 1648 aa10.9□□□□□ -0.66
SCARNA6-201ENST00000515982 GLI2P10070 1586 aa10.9□□□□□ -0.67
SCARNA6-201ENST00000515982 SUPT6HQ7KZ85 1726 aaKnown RBP10.89□□□□□ -0.67
SCARNA6-201ENST00000515982 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
SCARNA6-201ENST00000515982 FBXO41Q8TF61 875 aa10.89□□□□□ -0.67
SCARNA6-201ENST00000515982 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
SCARNA6-201ENST00000515982 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
SCARNA6-201ENST00000515982 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
SCARNA6-201ENST00000515982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.87□□□□□ -0.67
SCARNA6-201ENST00000515982 EFCAB2Q5VUJ9 269 aa10.86□□□□□ -0.67
SCARNA6-201ENST00000515982 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
SCARNA6-201ENST00000515982 PLCH2O75038 1416 aa10.85□□□□□ -0.67
SCARNA6-201ENST00000515982 CFDP1Q9UEE9 299 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms